RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
CDC42BPB-209ENST00000634889 EFCAB2Q5VUJ9 269 aa23.23■■□□□ 1.31
CDC42BPB-209ENST00000634889 ADGRL1O94910 1474 aa23.21■■□□□ 1.31
CDC42BPB-209ENST00000634889 GPATCH8Q9UKJ3 1502 aaKnown RBP23.21■■□□□ 1.31
CDC42BPB-209ENST00000634889 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
CDC42BPB-209ENST00000634889 APLP2Q06481 763 aa23.2■■□□□ 1.3
CDC42BPB-209ENST00000634889 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
CDC42BPB-209ENST00000634889 FRMPD1Q5SYB0 1578 aa23.19■■□□□ 1.3
CDC42BPB-209ENST00000634889 DENND4BO75064 1496 aaPredicted RBP23.19■■□□□ 1.3
CDC42BPB-209ENST00000634889 RICTORQ6R327 1708 aa23.19■■□□□ 1.3
CDC42BPB-209ENST00000634889 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
CDC42BPB-209ENST00000634889 SCAPERQ9BY12 1400 aa23.15■■□□□ 1.3
CDC42BPB-209ENST00000634889 ABCC1P33527 1531 aa23.14■■□□□ 1.3
CDC42BPB-209ENST00000634889 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
CDC42BPB-209ENST00000634889 POGZQ7Z3K3 1410 aa23.14■■□□□ 1.29
CDC42BPB-209ENST00000634889 RAPGEF3O95398 923 aa23.13■■□□□ 1.29
CDC42BPB-209ENST00000634889 ZMYM4Q5VZL5 1548 aa23.13■■□□□ 1.29
CDC42BPB-209ENST00000634889 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
CDC42BPB-209ENST00000634889 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
CDC42BPB-209ENST00000634889 ZNF518AQ6AHZ1 1483 aa23.1■■□□□ 1.29
CDC42BPB-209ENST00000634889 PLEKHH2Q8IVE3 1493 aa23.09■■□□□ 1.29
CDC42BPB-209ENST00000634889 KDM5CP41229 1560 aa23.07■■□□□ 1.28
CDC42BPB-209ENST00000634889 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
CDC42BPB-209ENST00000634889 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
CDC42BPB-209ENST00000634889 ARHGEF12Q9NZN5 1544 aa23.05■■□□□ 1.28
CDC42BPB-209ENST00000634889 ARHGEF40Q8TER5 1519 aa23.04■■□□□ 1.28
CDC42BPB-209ENST00000634889 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
CDC42BPB-209ENST00000634889 ZNF777Q9ULD5 760 aaPredicted RBP23.04■■□□□ 1.28
CDC42BPB-209ENST00000634889 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
CDC42BPB-209ENST00000634889 ZFYVE16Q7Z3T8 1539 aa23.02■■□□□ 1.28
CDC42BPB-209ENST00000634889 TRAPPC8Q9Y2L5 1435 aa23■■□□□ 1.27
CDC42BPB-209ENST00000634889 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
CDC42BPB-209ENST00000634889 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
CDC42BPB-209ENST00000634889 CAMSAP2Q08AD1 1489 aa22.98■■□□□ 1.27
CDC42BPB-209ENST00000634889 AFAP1Q8N556 730 aa22.98■■□□□ 1.27
CDC42BPB-209ENST00000634889 MLH3Q9UHC1 1453 aa22.98■■□□□ 1.27
CDC42BPB-209ENST00000634889 ZNF644Q9H582 1327 aaPredicted RBP22.95■■□□□ 1.26
CDC42BPB-209ENST00000634889 MBD5Q9P267 1494 aa22.95■■□□□ 1.26
CDC42BPB-209ENST00000634889 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
CDC42BPB-209ENST00000634889 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDC42BPB-209ENST00000634889 ARHGEF5Q12774 1597 aa22.92■■□□□ 1.26
CDC42BPB-209ENST00000634889 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
CDC42BPB-209ENST00000634889 INO80Q9ULG1 1556 aaPredicted RBP22.9■■□□□ 1.26
CDC42BPB-209ENST00000634889 ATP10AO60312 1499 aa22.9■■□□□ 1.26
CDC42BPB-209ENST00000634889 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
CDC42BPB-209ENST00000634889 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.26
CDC42BPB-209ENST00000634889 RSPH4AQ5TD94 716 aa22.89■■□□□ 1.25
CDC42BPB-209ENST00000634889 CCDC141Q6ZP82 1450 aa22.89■■□□□ 1.25
CDC42BPB-209ENST00000634889 C9orf84Q5VXU9 1444 aa22.89■■□□□ 1.25
CDC42BPB-209ENST00000634889 FGD6Q6ZV73 1430 aa22.89■■□□□ 1.25
CDC42BPB-209ENST00000634889 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
CDC42BPB-209ENST00000634889 PTPN23Q9H3S7 1636 aa22.88■■□□□ 1.25
CDC42BPB-209ENST00000634889 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
CDC42BPB-209ENST00000634889 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
CDC42BPB-209ENST00000634889 MYT1LQ9UL68 1186 aa22.86■■□□□ 1.25
CDC42BPB-209ENST00000634889 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
CDC42BPB-209ENST00000634889 RTEL1-TNFRSF6BF6WH68 1400 aa22.84■■□□□ 1.25
CDC42BPB-209ENST00000634889 SIGLEC1Q9BZZ2 1709 aa22.83■■□□□ 1.25
CDC42BPB-209ENST00000634889 BCORL1Q5H9F3 1711 aa22.82■■□□□ 1.24
CDC42BPB-209ENST00000634889 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
CDC42BPB-209ENST00000634889 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
CDC42BPB-209ENST00000634889 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
CDC42BPB-209ENST00000634889 ADGBQ8N7X0 1667 aa22.79■■□□□ 1.24
CDC42BPB-209ENST00000634889 AGLP35573 1532 aa22.78■■□□□ 1.24
CDC42BPB-209ENST00000634889 CROCC2H7BZ55 1655 aa22.78■■□□□ 1.24
CDC42BPB-209ENST00000634889 ADAMTSL3P82987 1691 aa22.77■■□□□ 1.24
CDC42BPB-209ENST00000634889 DNMT1P26358 1616 aaKnown RBP22.77■■□□□ 1.24
CDC42BPB-209ENST00000634889 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
CDC42BPB-209ENST00000634889 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
CDC42BPB-209ENST00000634889 PLXNC1O60486 1568 aa22.76■■□□□ 1.23
CDC42BPB-209ENST00000634889 SHANK2Q9UPX8 1470 aa22.75■■□□□ 1.23
CDC42BPB-209ENST00000634889 A2MP01023 1474 aa22.73■■□□□ 1.23
CDC42BPB-209ENST00000634889 PPARGC1BQ86YN6 1023 aaKnown RBP22.73■■□□□ 1.23
CDC42BPB-209ENST00000634889 DAPK1P53355 1430 aa22.73■■□□□ 1.23
CDC42BPB-209ENST00000634889 ABCC5O15440 1437 aa22.72■■□□□ 1.23
CDC42BPB-209ENST00000634889 MADDQ8WXG6 1647 aa22.7■■□□□ 1.22
CDC42BPB-209ENST00000634889 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
CDC42BPB-209ENST00000634889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.67■■□□□ 1.22
CDC42BPB-209ENST00000634889 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
CDC42BPB-209ENST00000634889 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
CDC42BPB-209ENST00000634889 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
CDC42BPB-209ENST00000634889 RRBP1Q9P2E9 1410 aaKnown RBP22.64■■□□□ 1.21
CDC42BPB-209ENST00000634889 RIMS1Q86UR5 1692 aaKnown RBP22.63■■□□□ 1.21
CDC42BPB-209ENST00000634889 MLECQ14165 292 aa22.63■■□□□ 1.21
CDC42BPB-209ENST00000634889 PTPRMP28827 1452 aa22.61■■□□□ 1.21
CDC42BPB-209ENST00000634889 DUOX2Q9NRD8 1548 aa22.61■■□□□ 1.21
CDC42BPB-209ENST00000634889 ADGRL2O95490 1459 aa22.6■■□□□ 1.21
CDC42BPB-209ENST00000634889 EIF2AK4Q9P2K8 1649 aaKnown RBP22.6■■□□□ 1.21
CDC42BPB-209ENST00000634889 ANKRD30AQ9BXX3 1397 aa22.59■■□□□ 1.21
CDC42BPB-209ENST00000634889 KIF15Q9NS87 1388 aa22.58■■□□□ 1.21
CDC42BPB-209ENST00000634889 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
CDC42BPB-209ENST00000634889 ERBINQ96RT1 1412 aa22.56■■□□□ 1.2
CDC42BPB-209ENST00000634889 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
CDC42BPB-209ENST00000634889 FAM135AQ9P2D6 1515 aa22.54■■□□□ 1.2
CDC42BPB-209ENST00000634889 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
CDC42BPB-209ENST00000634889 RNF17Q9BXT8 1623 aaKnown RBP22.53■■□□□ 1.2
CDC42BPB-209ENST00000634889 MROH2AA6NES4 1674 aa22.53■■□□□ 1.2
CDC42BPB-209ENST00000634889 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
CDC42BPB-209ENST00000634889 PTPRKQ15262 1439 aa22.52■■□□□ 1.2
CDC42BPB-209ENST00000634889 KIF3BO15066 747 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms