RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-223ENST00000630866 PKD2Q13563 968 aa11.14□□□□□ -0.63
SPTAN1-223ENST00000630866 CLSTN1O94985 981 aa11.13□□□□□ -0.63
SPTAN1-223ENST00000630866 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-223ENST00000630866 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-223ENST00000630866 HNRNPMP52272 730 aaKnown RBP eCLIP11.12□□□□□ -0.634e-6■■■■□ 23.6
SPTAN1-223ENST00000630866 NGDNQ8NEJ9 315 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-223ENST00000630866 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
SPTAN1-223ENST00000630866 ANKRD30AQ9BXX3 1397 aa11.11□□□□□ -0.63
SPTAN1-223ENST00000630866 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-223ENST00000630866 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
SPTAN1-223ENST00000630866 IRX6P78412 446 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-223ENST00000630866 ZRSR1Q15695 479 aaKnown RBP11.1□□□□□ -0.63
SPTAN1-223ENST00000630866 NUP155O75694 1391 aa11.1□□□□□ -0.63
SPTAN1-223ENST00000630866 FGD1P98174 961 aa11.1□□□□□ -0.63
SPTAN1-223ENST00000630866 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
SPTAN1-223ENST00000630866 MS4A1P11836 297 aa11.1□□□□□ -0.63
SPTAN1-223ENST00000630866 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-223ENST00000630866 ABCC8Q09428 1581 aa11.09□□□□□ -0.63
SPTAN1-223ENST00000630866 KCNJ4P48050 445 aa11.09□□□□□ -0.63
SPTAN1-223ENST00000630866 NUTM2DQ5VT03 806 aaPredicted RBP11.08□□□□□ -0.64
SPTAN1-223ENST00000630866 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
SPTAN1-223ENST00000630866 FANCD2Q9BXW9 1451 aa11.07□□□□□ -0.64
SPTAN1-223ENST00000630866 BECN1Q14457 450 aa11.07□□□□□ -0.64
SPTAN1-223ENST00000630866 NAP1L2Q9ULW6 460 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-223ENST00000630866 PTPRGP23470 1445 aa11.06□□□□□ -0.64
SPTAN1-223ENST00000630866 G3V3G9 751 aa11.06□□□□□ -0.64
SPTAN1-223ENST00000630866 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
SPTAN1-223ENST00000630866 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
SPTAN1-223ENST00000630866 CCDC18Q5T9S5 1454 aa11.05□□□□□ -0.64
SPTAN1-223ENST00000630866 WIZO95785 1651 aa11.05□□□□□ -0.64
SPTAN1-223ENST00000630866 EVA1CP58658 441 aa11.05□□□□□ -0.64
SPTAN1-223ENST00000630866 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-223ENST00000630866 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-223ENST00000630866 EIF3AQ14152 1382 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-223ENST00000630866 TERF2IPQ9NYB0 399 aa11.04□□□□□ -0.64
SPTAN1-223ENST00000630866 ROCK2O75116 1388 aaKnown RBP11.04□□□□□ -0.64
SPTAN1-223ENST00000630866 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
SPTAN1-223ENST00000630866 AMPHP49418 695 aa11.03□□□□□ -0.64
SPTAN1-223ENST00000630866 NBR1Q14596 966 aa11.03□□□□□ -0.64
SPTAN1-223ENST00000630866 ATAD2BQ9ULI0 1458 aa11.03□□□□□ -0.64
SPTAN1-223ENST00000630866 GOLGA6L22H0YM25 854 aa11.03□□□□□ -0.64
SPTAN1-223ENST00000630866 CHMP4AQ9BY43 222 aa11.03□□□□□ -0.64
SPTAN1-223ENST00000630866 MIER1Q8N108 512 aa11.02□□□□□ -0.64
SPTAN1-223ENST00000630866 CALD1Q05682 793 aaKnown RBP11.02□□□□□ -0.65
SPTAN1-223ENST00000630866 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
SPTAN1-223ENST00000630866 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
SPTAN1-223ENST00000630866 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
SPTAN1-223ENST00000630866 U2AF1L5P0DN76 240 aaPredicted RBP11□□□□□ -0.65
SPTAN1-223ENST00000630866 U2AF1Q01081 240 aaKnown RBP eCLIP11□□□□□ -0.65
SPTAN1-223ENST00000630866 TPRNQ4KMQ1 711 aa11□□□□□ -0.65
SPTAN1-223ENST00000630866 MPHOSPH9Q99550 1183 aa11□□□□□ -0.65
SPTAN1-223ENST00000630866 MSH5O43196 834 aa11□□□□□ -0.65
SPTAN1-223ENST00000630866 TAF7LQ5H9L4 462 aa11□□□□□ -0.65
SPTAN1-223ENST00000630866 FHOD3Q2V2M9 1422 aa10.99□□□□□ -0.65
SPTAN1-223ENST00000630866 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
SPTAN1-223ENST00000630866 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
SPTAN1-223ENST00000630866 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
SPTAN1-223ENST00000630866 DNTTIP2Q5QJE6 756 aaKnown RBP10.98□□□□□ -0.65
SPTAN1-223ENST00000630866 SMARCA4P51532 1647 aa10.97□□□□□ -0.65
SPTAN1-223ENST00000630866 SF3B2Q13435 895 aaKnown RBP10.97□□□□□ -0.65
SPTAN1-223ENST00000630866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPTAN1-223ENST00000630866 MYO15BQ96JP2 1530 aa10.97□□□□□ -0.65
SPTAN1-223ENST00000630866 GORABQ5T7V8 394 aa10.96□□□□□ -0.65
SPTAN1-223ENST00000630866 KTN1Q86UP2 1357 aaKnown RBP10.96□□□□□ -0.65
SPTAN1-223ENST00000630866 STK31Q9BXU1 1019 aa10.96□□□□□ -0.65
SPTAN1-223ENST00000630866 KANK4Q5T7N3 995 aaPredicted RBP10.96□□□□□ -0.66
SPTAN1-223ENST00000630866 TRAK1Q9UPV9 953 aa10.96□□□□□ -0.66
SPTAN1-223ENST00000630866 PTMAP06454 111 aaKnown RBP10.96□□□□□ -0.66
SPTAN1-223ENST00000630866 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
SPTAN1-223ENST00000630866 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
SPTAN1-223ENST00000630866 IPO8O15397 1037 aaKnown RBP10.95□□□□□ -0.66
SPTAN1-223ENST00000630866 ATF3P18847 181 aa10.94□□□□□ -0.66
SPTAN1-223ENST00000630866 RGS3P49796 1198 aa10.94□□□□□ -0.66
SPTAN1-223ENST00000630866 ANP32EQ9BTT0 268 aa10.94□□□□□ -0.66
SPTAN1-223ENST00000630866 UACAQ9BZF9 1416 aa10.93□□□□□ -0.66
SPTAN1-223ENST00000630866 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
SPTAN1-223ENST00000630866 PSME1Q06323 249 aa10.93□□□□□ -0.66
SPTAN1-223ENST00000630866 HDAC5Q9UQL6 1122 aa10.93□□□□□ -0.66
SPTAN1-223ENST00000630866 MCCP23508 829 aa10.92□□□□□ -0.66
SPTAN1-223ENST00000630866 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
SPTAN1-223ENST00000630866 FRAT2O75474 233 aaPredicted RBP10.92□□□□□ -0.66
SPTAN1-223ENST00000630866 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
SPTAN1-223ENST00000630866 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
SPTAN1-223ENST00000630866 APBB1O00213 710 aa10.91□□□□□ -0.66
SPTAN1-223ENST00000630866 C1orf141Q5JVX7 400 aa10.91□□□□□ -0.66
SPTAN1-223ENST00000630866 PRDM2Q13029 1718 aa10.91□□□□□ -0.66
SPTAN1-223ENST00000630866 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
SPTAN1-223ENST00000630866 KIAA1211Q6ZU35 1233 aa10.9□□□□□ -0.66
SPTAN1-223ENST00000630866 GNL2Q13823 731 aaKnown RBP10.9□□□□□ -0.66
SPTAN1-223ENST00000630866 LMOD3Q0VAK6 560 aa10.9□□□□□ -0.67
SPTAN1-223ENST00000630866 HSP90AB1P08238 724 aaKnown RBP10.89□□□□□ -0.67
SPTAN1-223ENST00000630866 SYTL4Q96C24 671 aaPredicted RBP10.89□□□□□ -0.67
SPTAN1-223ENST00000630866 COG3Q96JB2 828 aa10.89□□□□□ -0.67
SPTAN1-223ENST00000630866 CCDC144AA2RUR9 1427 aa10.89□□□□□ -0.67
SPTAN1-223ENST00000630866 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
SPTAN1-223ENST00000630866 GOLGA6L4A6NEF3 574 aa10.88□□□□□ -0.67
SPTAN1-223ENST00000630866 GPATCH3Q96I76 525 aa10.87□□□□□ -0.67
SPTAN1-223ENST00000630866 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
SPTAN1-223ENST00000630866 EVC2Q86UK5 1308 aa10.87□□□□□ -0.67
SPTAN1-223ENST00000630866 RAB3GAP2Q9H2M9 1393 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms