RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 KIF14Q15058 1648 aa23.58■■□□□ 1.36
CDK7-215ENST00000629350 FMN1Q68DA7 1419 aa23.55■■□□□ 1.36
CDK7-215ENST00000629350 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
CDK7-215ENST00000629350 NEO1Q92859 1461 aa23.51■■□□□ 1.35
CDK7-215ENST00000629350 U3KPZ7 1027 aaPredicted RBP23.48■■□□□ 1.35
CDK7-215ENST00000629350 MYO5CQ9NQX4 1742 aa23.46■■□□□ 1.35
CDK7-215ENST00000629350 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
CDK7-215ENST00000629350 CFAP74Q9C0B2 1584 aa23.44■■□□□ 1.34
CDK7-215ENST00000629350 FANCAO15360 1455 aa23.44■■□□□ 1.34
CDK7-215ENST00000629350 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
CDK7-215ENST00000629350 SIGLEC1Q9BZZ2 1709 aa23.44■■□□□ 1.34
CDK7-215ENST00000629350 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
CDK7-215ENST00000629350 CLIP1P30622 1438 aa23.42■■□□□ 1.34
CDK7-215ENST00000629350 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
CDK7-215ENST00000629350 ARHGEF40Q8TER5 1519 aa23.4■■□□□ 1.34
CDK7-215ENST00000629350 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
CDK7-215ENST00000629350 MYCNP04198 464 aaPredicted RBP23.39■■□□□ 1.33
CDK7-215ENST00000629350 TROQ12816 1431 aaPredicted RBP23.39■■□□□ 1.33
CDK7-215ENST00000629350 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
CDK7-215ENST00000629350 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
CDK7-215ENST00000629350 CDC42BPBQ9Y5S2 1711 aa23.36■■□□□ 1.33
CDK7-215ENST00000629350 RNF39Q9H2S5 420 aa23.36■■□□□ 1.33
CDK7-215ENST00000629350 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
CDK7-215ENST00000629350 PLCH2O75038 1416 aa23.34■■□□□ 1.33
CDK7-215ENST00000629350 DENND4BO75064 1496 aaPredicted RBP23.34■■□□□ 1.33
CDK7-215ENST00000629350 ADAMTSL3P82987 1691 aa23.33■■□□□ 1.33
CDK7-215ENST00000629350 PREX2Q70Z35 1606 aa23.33■■□□□ 1.32
CDK7-215ENST00000629350 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
CDK7-215ENST00000629350 CDC42BPAQ5VT25 1732 aa23.31■■□□□ 1.32
CDK7-215ENST00000629350 BCORL1Q5H9F3 1711 aa23.3■■□□□ 1.32
CDK7-215ENST00000629350 YEATS2Q9ULM3 1422 aa23.3■■□□□ 1.32
CDK7-215ENST00000629350 POGZQ7Z3K3 1410 aa23.29■■□□□ 1.32
CDK7-215ENST00000629350 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
CDK7-215ENST00000629350 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
CDK7-215ENST00000629350 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
CDK7-215ENST00000629350 ZFYVE16Q7Z3T8 1539 aa23.26■■□□□ 1.31
CDK7-215ENST00000629350 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
CDK7-215ENST00000629350 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
CDK7-215ENST00000629350 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
CDK7-215ENST00000629350 ABCC1P33527 1531 aa23.21■■□□□ 1.31
CDK7-215ENST00000629350 ARHGEF12Q9NZN5 1544 aa23.21■■□□□ 1.31
CDK7-215ENST00000629350 KDM5CP41229 1560 aa23.21■■□□□ 1.31
CDK7-215ENST00000629350 RIMS1Q86UR5 1692 aaKnown RBP23.19■■□□□ 1.3
CDK7-215ENST00000629350 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
CDK7-215ENST00000629350 ABCA6Q8N139 1617 aa23.17■■□□□ 1.3
CDK7-215ENST00000629350 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
CDK7-215ENST00000629350 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
CDK7-215ENST00000629350 PTPRMP28827 1452 aa23.15■■□□□ 1.3
CDK7-215ENST00000629350 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.3
CDK7-215ENST00000629350 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
CDK7-215ENST00000629350 MAGI2Q86UL8 1455 aa23.12■■□□□ 1.29
CDK7-215ENST00000629350 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
CDK7-215ENST00000629350 ZNF518AQ6AHZ1 1483 aa23.11■■□□□ 1.29
CDK7-215ENST00000629350 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
CDK7-215ENST00000629350 GPATCH8Q9UKJ3 1502 aaKnown RBP23.11■■□□□ 1.29
CDK7-215ENST00000629350 FER1L4A9Z1Z3 1794 aa23.1■■□□□ 1.29
CDK7-215ENST00000629350 SYCP2Q9BX26 1530 aa23.09■■□□□ 1.29
CDK7-215ENST00000629350 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
CDK7-215ENST00000629350 AFAP1Q8N556 730 aa23.08■■□□□ 1.29
CDK7-215ENST00000629350 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.28
CDK7-215ENST00000629350 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
CDK7-215ENST00000629350 ATP10AO60312 1499 aa23.05■■□□□ 1.28
CDK7-215ENST00000629350 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
CDK7-215ENST00000629350 C1QBPQ07021 282 aaKnown RBP23.03■■□□□ 1.28
CDK7-215ENST00000629350 SAMD1Q6SPF0 538 aaPredicted RBP23.02■■□□□ 1.28
CDK7-215ENST00000629350 REREQ9P2R6 1566 aa23.01■■□□□ 1.27
CDK7-215ENST00000629350 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
CDK7-215ENST00000629350 MLH3Q9UHC1 1453 aa23■■□□□ 1.27
CDK7-215ENST00000629350 INO80Q9ULG1 1556 aaPredicted RBP22.99■■□□□ 1.27
CDK7-215ENST00000629350 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
CDK7-215ENST00000629350 MLECQ14165 292 aa22.97■■□□□ 1.27
CDK7-215ENST00000629350 LMTK3Q96Q04 1460 aa22.96■■□□□ 1.27
CDK7-215ENST00000629350 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
CDK7-215ENST00000629350 ZNF777Q9ULD5 760 aaPredicted RBP22.95■■□□□ 1.26
CDK7-215ENST00000629350 CCNB3Q8WWL7 1395 aa22.94■■□□□ 1.26
CDK7-215ENST00000629350 NCOA2Q15596 1464 aa22.93■■□□□ 1.26
CDK7-215ENST00000629350 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
CDK7-215ENST00000629350 ATP7AQ04656 1500 aa22.92■■□□□ 1.26
CDK7-215ENST00000629350 ATF5Q9Y2D1 282 aaPredicted RBP22.91■■□□□ 1.26
CDK7-215ENST00000629350 HNRNPMP52272 730 aaKnown RBP eCLIP22.9■■□□□ 1.262e-9■■■■■ 32.2
CDK7-215ENST00000629350 AGLP35573 1532 aa22.89■■□□□ 1.26
CDK7-215ENST00000629350 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
CDK7-215ENST00000629350 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
CDK7-215ENST00000629350 C3P01024 1663 aa22.87■■□□□ 1.25
CDK7-215ENST00000629350 ATXN8OSP0DMR3 200 aa22.87■■□□□ 1.25
CDK7-215ENST00000629350 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
CDK7-215ENST00000629350 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
CDK7-215ENST00000629350 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
CDK7-215ENST00000629350 CFDP1Q9UEE9 299 aaPredicted RBP22.86■■□□□ 1.25
CDK7-215ENST00000629350 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
CDK7-215ENST00000629350 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
CDK7-215ENST00000629350 SPINK5Q9NQ38 1064 aaPredicted RBP22.84■■□□□ 1.25
CDK7-215ENST00000629350 MYT1LQ9UL68 1186 aa22.84■■□□□ 1.25
CDK7-215ENST00000629350 PREX1Q8TCU6 1659 aa22.81■■□□□ 1.24
CDK7-215ENST00000629350 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
CDK7-215ENST00000629350 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
CDK7-215ENST00000629350 SPAG9O60271 1321 aaKnown RBP22.8■■□□□ 1.24
CDK7-215ENST00000629350 MAP3K1Q13233 1512 aa22.78■■□□□ 1.24
CDK7-215ENST00000629350 CLTCQ00610 1675 aaKnown RBP22.77■■□□□ 1.24
CDK7-215ENST00000629350 HSPA2P54652 639 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms