RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 STRCQ7RTU9 1775 aa20.45■□□□□ 0.86
CHD2-218ENST00000629346 CFAP74Q9C0B2 1584 aa20.45■□□□□ 0.86
CHD2-218ENST00000629346 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
CHD2-218ENST00000629346 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
CHD2-218ENST00000629346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.86
CHD2-218ENST00000629346 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
CHD2-218ENST00000629346 ARHGEF12Q9NZN5 1544 aa20.41■□□□□ 0.86
CHD2-218ENST00000629346 UHRF1BP1Q6BDS2 1440 aa20.4■□□□□ 0.86
CHD2-218ENST00000629346 SCAPERQ9BY12 1400 aa20.39■□□□□ 0.85
CHD2-218ENST00000629346 ATP10AO60312 1499 aa20.37■□□□□ 0.85
CHD2-218ENST00000629346 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
CHD2-218ENST00000629346 PTPRTO14522 1441 aa20.35■□□□□ 0.85
CHD2-218ENST00000629346 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
CHD2-218ENST00000629346 MYT1LQ9UL68 1186 aa20.31■□□□□ 0.84
CHD2-218ENST00000629346 PLCH2O75038 1416 aa20.29■□□□□ 0.84
CHD2-218ENST00000629346 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
CHD2-218ENST00000629346 UBAP1LF5GYI3 381 aa20.26■□□□□ 0.83
CHD2-218ENST00000629346 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
CHD2-218ENST00000629346 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
CHD2-218ENST00000629346 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
CHD2-218ENST00000629346 IQSEC2Q5JU85 1478 aa20.24■□□□□ 0.83
CHD2-218ENST00000629346 AFAP1Q8N556 730 aa20.24■□□□□ 0.83
CHD2-218ENST00000629346 CDK13Q14004 1512 aaKnown RBP20.23■□□□□ 0.83
CHD2-218ENST00000629346 C3P01024 1663 aa20.21■□□□□ 0.83
CHD2-218ENST00000629346 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
CHD2-218ENST00000629346 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
CHD2-218ENST00000629346 TRAPPC8Q9Y2L5 1435 aa20.19■□□□□ 0.82
CHD2-218ENST00000629346 ZNF518AQ6AHZ1 1483 aa20.18■□□□□ 0.82
CHD2-218ENST00000629346 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
CHD2-218ENST00000629346 NCKAP5LQ9HCH0 1330 aa20.16■□□□□ 0.82
CHD2-218ENST00000629346 MYO5CQ9NQX4 1742 aa20.15■□□□□ 0.82
CHD2-218ENST00000629346 DIP2CQ9Y2E4 1556 aa20.14■□□□□ 0.81
CHD2-218ENST00000629346 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
CHD2-218ENST00000629346 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
CHD2-218ENST00000629346 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
CHD2-218ENST00000629346 KDM5CP41229 1560 aa20.11■□□□□ 0.81
CHD2-218ENST00000629346 ABCA6Q8N139 1617 aa20.09■□□□□ 0.81
CHD2-218ENST00000629346 HSPA1LP34931 641 aa20.08■□□□□ 0.81
CHD2-218ENST00000629346 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
CHD2-218ENST00000629346 KIF14Q15058 1648 aa20.08■□□□□ 0.8
CHD2-218ENST00000629346 REREQ9P2R6 1566 aa20.08■□□□□ 0.8
CHD2-218ENST00000629346 PIP4K2BP78356 416 aa20.07■□□□□ 0.8
CHD2-218ENST00000629346 MED1Q15648 1581 aaPredicted RBP20.05■□□□□ 0.8
CHD2-218ENST00000629346 AGLP35573 1532 aa20.05■□□□□ 0.8
CHD2-218ENST00000629346 MLH3Q9UHC1 1453 aa20.05■□□□□ 0.8
CHD2-218ENST00000629346 CNTLNQ9NXG0 1405 aa20.04■□□□□ 0.8
CHD2-218ENST00000629346 PKD2Q13563 968 aa20.01■□□□□ 0.79
CHD2-218ENST00000629346 NPATQ14207 1427 aa20.01■□□□□ 0.79
CHD2-218ENST00000629346 ZMYM3Q14202 1370 aa20■□□□□ 0.79
CHD2-218ENST00000629346 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
CHD2-218ENST00000629346 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
CHD2-218ENST00000629346 TROQ12816 1431 aaPredicted RBP19.98■□□□□ 0.79
CHD2-218ENST00000629346 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
CHD2-218ENST00000629346 CLIP1P30622 1438 aa19.96■□□□□ 0.79
CHD2-218ENST00000629346 TOM1O60784 492 aa19.95■□□□□ 0.78
CHD2-218ENST00000629346 CDC42BPBQ9Y5S2 1711 aa19.95■□□□□ 0.78
CHD2-218ENST00000629346 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
CHD2-218ENST00000629346 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
CHD2-218ENST00000629346 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
CHD2-218ENST00000629346 MROH2AA6NES4 1674 aa19.93■□□□□ 0.78
CHD2-218ENST00000629346 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
CHD2-218ENST00000629346 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
CHD2-218ENST00000629346 ABCC1P33527 1531 aa19.92■□□□□ 0.78
CHD2-218ENST00000629346 EEA1Q15075 1411 aa19.92■□□□□ 0.78
CHD2-218ENST00000629346 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
CHD2-218ENST00000629346 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
CHD2-218ENST00000629346 MYO3AQ8NEV4 1616 aa19.91■□□□□ 0.78
CHD2-218ENST00000629346 ITSN2Q9NZM3 1697 aa19.91■□□□□ 0.78
CHD2-218ENST00000629346 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.77
CHD2-218ENST00000629346 ZNF142P52746 1687 aaPredicted RBP19.88■□□□□ 0.77
CHD2-218ENST00000629346 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
CHD2-218ENST00000629346 UBTFP17480 764 aaKnown RBP19.88■□□□□ 0.77
CHD2-218ENST00000629346 GGT6Q6P531 493 aa19.87■□□□□ 0.77
CHD2-218ENST00000629346 PREX2Q70Z35 1606 aa19.87■□□□□ 0.77
CHD2-218ENST00000629346 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
CHD2-218ENST00000629346 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
CHD2-218ENST00000629346 ARHGAP35Q9NRY4 1499 aa19.84■□□□□ 0.77
CHD2-218ENST00000629346 SAMD9LQ8IVG5 1584 aa19.83■□□□□ 0.77
CHD2-218ENST00000629346 HNRNPMP52272 730 aaKnown RBP eCLIP19.83■□□□□ 0.77
CHD2-218ENST00000629346 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
CHD2-218ENST00000629346 CPS1P31327 1500 aa19.81■□□□□ 0.76
CHD2-218ENST00000629346 SHANK2Q9UPX8 1470 aa19.81■□□□□ 0.76
CHD2-218ENST00000629346 A2ML1A8K2U0 1454 aa19.79■□□□□ 0.76
CHD2-218ENST00000629346 DNMT1P26358 1616 aaKnown RBP19.78■□□□□ 0.76
CHD2-218ENST00000629346 SYCP2Q9BX26 1530 aa19.77■□□□□ 0.76
CHD2-218ENST00000629346 A2MP01023 1474 aa19.77■□□□□ 0.76
CHD2-218ENST00000629346 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
CHD2-218ENST00000629346 ATP7AQ04656 1500 aa19.75■□□□□ 0.75
CHD2-218ENST00000629346 NEURL4Q96JN8 1562 aa19.74■□□□□ 0.75
CHD2-218ENST00000629346 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
CHD2-218ENST00000629346 ANKLE2Q86XL3 938 aa19.73■□□□□ 0.75
CHD2-218ENST00000629346 RGS17Q9UGC6 210 aaPredicted RBP19.73■□□□□ 0.75
CHD2-218ENST00000629346 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
CHD2-218ENST00000629346 PLXNC1O60486 1568 aa19.72■□□□□ 0.75
CHD2-218ENST00000629346 POLR1AO95602 1720 aaPredicted RBP19.72■□□□□ 0.75
CHD2-218ENST00000629346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
CHD2-218ENST00000629346 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
CHD2-218ENST00000629346 VWDEQ8N2E2 1590 aa19.69■□□□□ 0.74
CHD2-218ENST00000629346 TNRQ92752 1358 aa19.69■□□□□ 0.74
CHD2-218ENST00000629346 CCDC18Q5T9S5 1454 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms