RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
PTP4A1-206ENST00000627002 KIF14Q15058 1648 aa11.35□□□□□ -0.59
PTP4A1-206ENST00000627002 TCOF1Q13428 1488 aaKnown RBP11.33□□□□□ -0.6
PTP4A1-206ENST00000627002 ABCC10Q5T3U5 1492 aa11.32□□□□□ -0.6
PTP4A1-206ENST00000627002 ZCCHC11Q5TAX3 1644 aaKnown RBP11.31□□□□□ -0.6
PTP4A1-206ENST00000627002 PTPN23Q9H3S7 1636 aa11.31□□□□□ -0.6
PTP4A1-206ENST00000627002 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
PTP4A1-206ENST00000627002 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTP4A1-206ENST00000627002 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
PTP4A1-206ENST00000627002 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
PTP4A1-206ENST00000627002 KCNA4P22459 653 aa11.29□□□□□ -0.6
PTP4A1-206ENST00000627002 ITGAEP38570 1179 aa11.29□□□□□ -0.6
PTP4A1-206ENST00000627002 WDR7Q9Y4E6 1490 aa11.27□□□□□ -0.6
PTP4A1-206ENST00000627002 HRCP23327 699 aa11.26□□□□□ -0.61
PTP4A1-206ENST00000627002 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
PTP4A1-206ENST00000627002 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
PTP4A1-206ENST00000627002 CAMSAP2Q08AD1 1489 aa11.25□□□□□ -0.61
PTP4A1-206ENST00000627002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTP4A1-206ENST00000627002 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
PTP4A1-206ENST00000627002 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
PTP4A1-206ENST00000627002 SETD5Q9C0A6 1442 aa11.24□□□□□ -0.61
PTP4A1-206ENST00000627002 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
PTP4A1-206ENST00000627002 PLCH2O75038 1416 aa11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 DAPK1P53355 1430 aa11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 TTC37Q6PGP7 1564 aa11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 ZNF644Q9H582 1327 aaPredicted RBP11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 ZNF777Q9ULD5 760 aaPredicted RBP11.22□□□□□ -0.61
PTP4A1-206ENST00000627002 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.61
PTP4A1-206ENST00000627002 HFM1A2PYH4 1435 aa11.21□□□□□ -0.61
PTP4A1-206ENST00000627002 PTPRKQ15262 1439 aa11.21□□□□□ -0.61
PTP4A1-206ENST00000627002 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 ARHGAP5Q13017 1502 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 ARAP3Q8WWN8 1544 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 PLEKHH2Q8IVE3 1493 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 ABCC5O15440 1437 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 ROCK1Q13464 1354 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
PTP4A1-206ENST00000627002 EFCAB2Q5VUJ9 269 aa11.19□□□□□ -0.62
PTP4A1-206ENST00000627002 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
PTP4A1-206ENST00000627002 MAPKBP1O60336 1514 aa11.18□□□□□ -0.62
PTP4A1-206ENST00000627002 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
PTP4A1-206ENST00000627002 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
PTP4A1-206ENST00000627002 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
PTP4A1-206ENST00000627002 ARHGEF5Q12774 1597 aa11.17□□□□□ -0.62
PTP4A1-206ENST00000627002 SHANK2Q9UPX8 1470 aa11.17□□□□□ -0.62
PTP4A1-206ENST00000627002 NAIPQ13075 1403 aa11.17□□□□□ -0.62
PTP4A1-206ENST00000627002 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 TSPY4P0CV99 314 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 TSPY10P0CW01 314 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 CHIC2Q9UKJ5 165 aa11.16□□□□□ -0.62
PTP4A1-206ENST00000627002 ADGRL2O95490 1459 aa11.15□□□□□ -0.62
PTP4A1-206ENST00000627002 CCDC141Q6ZP82 1450 aa11.15□□□□□ -0.62
PTP4A1-206ENST00000627002 MBD5Q9P267 1494 aa11.15□□□□□ -0.62
PTP4A1-206ENST00000627002 DHX57Q6P158 1386 aaKnown RBP11.15□□□□□ -0.63
PTP4A1-206ENST00000627002 ANKRD30AQ9BXX3 1397 aa11.15□□□□□ -0.63
PTP4A1-206ENST00000627002 HNRNPMP52272 730 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTP4A1-206ENST00000627002 RRP7BPQ9NSQ0 103 aa11.14□□□□□ -0.63
PTP4A1-206ENST00000627002 C9orf84Q5VXU9 1444 aa11.14□□□□□ -0.63
PTP4A1-206ENST00000627002 CROCC2H7BZ55 1655 aa11.13□□□□□ -0.63
PTP4A1-206ENST00000627002 SYCP2Q9BX26 1530 aa11.13□□□□□ -0.63
PTP4A1-206ENST00000627002 FANCAO15360 1455 aa11.12□□□□□ -0.63
PTP4A1-206ENST00000627002 NCOA1Q15788 1441 aa11.12□□□□□ -0.63
PTP4A1-206ENST00000627002 CD109Q6YHK3 1445 aa11.12□□□□□ -0.63
PTP4A1-206ENST00000627002 GCC2Q8IWJ2 1684 aa11.12□□□□□ -0.63
PTP4A1-206ENST00000627002 ABCC1P33527 1531 aa11.12□□□□□ -0.63
PTP4A1-206ENST00000627002 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
PTP4A1-206ENST00000627002 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
PTP4A1-206ENST00000627002 MAST1Q9Y2H9 1570 aa11.1□□□□□ -0.63
PTP4A1-206ENST00000627002 GLI2P10070 1586 aa11.09□□□□□ -0.63
PTP4A1-206ENST00000627002 CFAP74Q9C0B2 1584 aa11.09□□□□□ -0.63
PTP4A1-206ENST00000627002 KIF13AQ9H1H9 1805 aa11.08□□□□□ -0.64
PTP4A1-206ENST00000627002 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
PTP4A1-206ENST00000627002 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
PTP4A1-206ENST00000627002 ADGRL1O94910 1474 aa11.07□□□□□ -0.64
PTP4A1-206ENST00000627002 KIF15Q9NS87 1388 aa11.07□□□□□ -0.64
PTP4A1-206ENST00000627002 RTEL1-TNFRSF6BF6WH68 1400 aa11.07□□□□□ -0.64
PTP4A1-206ENST00000627002 NEO1Q92859 1461 aa11.06□□□□□ -0.64
PTP4A1-206ENST00000627002 KDM6BO15054 1643 aa11.06□□□□□ -0.64
PTP4A1-206ENST00000627002 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
PTP4A1-206ENST00000627002 ANKRD50Q9ULJ7 1429 aa11.06□□□□□ -0.64
PTP4A1-206ENST00000627002 TRAPPC8Q9Y2L5 1435 aa11.06□□□□□ -0.64
PTP4A1-206ENST00000627002 DIP2BQ9P265 1576 aa11.05□□□□□ -0.64
PTP4A1-206ENST00000627002 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
PTP4A1-206ENST00000627002 PLXNC1O60486 1568 aa11.04□□□□□ -0.64
PTP4A1-206ENST00000627002 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
PTP4A1-206ENST00000627002 MAP3K4Q9Y6R4 1608 aa11.04□□□□□ -0.64
PTP4A1-206ENST00000627002 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
PTP4A1-206ENST00000627002 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
PTP4A1-206ENST00000627002 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
PTP4A1-206ENST00000627002 DUOX2Q9NRD8 1548 aa11.02□□□□□ -0.65
PTP4A1-206ENST00000627002 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
PTP4A1-206ENST00000627002 ERBINQ96RT1 1412 aa11.01□□□□□ -0.65
PTP4A1-206ENST00000627002 TEX14Q8IWB6 1497 aa11□□□□□ -0.65
PTP4A1-206ENST00000627002 ZFYVE16Q7Z3T8 1539 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms