RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 TPRNQ4KMQ1 711 aa12.8□□□□□ -0.36
SMN2-214ENST00000626847 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
SMN2-214ENST00000626847 ARXQ96QS3 562 aa12.79□□□□□ -0.36
SMN2-214ENST00000626847 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
SMN2-214ENST00000626847 NBR1Q14596 966 aa12.79□□□□□ -0.36
SMN2-214ENST00000626847 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
SMN2-214ENST00000626847 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
SMN2-214ENST00000626847 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
SMN2-214ENST00000626847 LMTK3Q96Q04 1460 aa12.77□□□□□ -0.37
SMN2-214ENST00000626847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
SMN2-214ENST00000626847 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
SMN2-214ENST00000626847 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
SMN2-214ENST00000626847 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
SMN2-214ENST00000626847 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
SMN2-214ENST00000626847 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
SMN2-214ENST00000626847 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
SMN2-214ENST00000626847 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
SMN2-214ENST00000626847 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
SMN2-214ENST00000626847 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
SMN2-214ENST00000626847 CFTRP13569 1480 aa12.69□□□□□ -0.38
SMN2-214ENST00000626847 CHD1O14646 1710 aa12.68□□□□□ -0.38
SMN2-214ENST00000626847 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
SMN2-214ENST00000626847 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
SMN2-214ENST00000626847 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
SMN2-214ENST00000626847 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
SMN2-214ENST00000626847 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
SMN2-214ENST00000626847 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
SMN2-214ENST00000626847 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
SMN2-214ENST00000626847 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
SMN2-214ENST00000626847 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
SMN2-214ENST00000626847 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
SMN2-214ENST00000626847 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMN2-214ENST00000626847 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
SMN2-214ENST00000626847 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
SMN2-214ENST00000626847 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
SMN2-214ENST00000626847 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
SMN2-214ENST00000626847 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
SMN2-214ENST00000626847 C7P10643 843 aa12.54□□□□□ -0.4
SMN2-214ENST00000626847 WIZO95785 1651 aa12.52□□□□□ -0.4
SMN2-214ENST00000626847 TOPBP1Q92547 1522 aa12.52□□□□□ -0.4
SMN2-214ENST00000626847 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
SMN2-214ENST00000626847 PSEN1P49768 467 aa12.5□□□□□ -0.41
SMN2-214ENST00000626847 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
SMN2-214ENST00000626847 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
SMN2-214ENST00000626847 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
SMN2-214ENST00000626847 GAPVD1Q14C86 1478 aa12.49□□□□□ -0.41
SMN2-214ENST00000626847 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
SMN2-214ENST00000626847 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
SMN2-214ENST00000626847 TARBP1Q13395 1621 aaKnown RBP12.46□□□□□ -0.41
SMN2-214ENST00000626847 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
SMN2-214ENST00000626847 SYNJ1O43426 1573 aa12.44□□□□□ -0.42
SMN2-214ENST00000626847 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
SMN2-214ENST00000626847 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
SMN2-214ENST00000626847 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
SMN2-214ENST00000626847 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
SMN2-214ENST00000626847 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
SMN2-214ENST00000626847 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
SMN2-214ENST00000626847 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
SMN2-214ENST00000626847 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
SMN2-214ENST00000626847 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
SMN2-214ENST00000626847 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
SMN2-214ENST00000626847 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
SMN2-214ENST00000626847 MAP3K13O43283 966 aa12.37□□□□□ -0.43
SMN2-214ENST00000626847 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
SMN2-214ENST00000626847 ERCC6L2Q5T890 1561 aa12.36□□□□□ -0.43
SMN2-214ENST00000626847 TDRD9Q8NDG6 1382 aaKnown RBP12.36□□□□□ -0.43
SMN2-214ENST00000626847 NLRP6P59044 892 aa12.35□□□□□ -0.43
SMN2-214ENST00000626847 KIF12Q96FN5 646 aa12.35□□□□□ -0.43
SMN2-214ENST00000626847 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
SMN2-214ENST00000626847 EFCAB3Q8N7B9 438 aa12.34□□□□□ -0.43
SMN2-214ENST00000626847 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
SMN2-214ENST00000626847 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
SMN2-214ENST00000626847 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
SMN2-214ENST00000626847 SOX12O15370 315 aa12.32□□□□□ -0.44
SMN2-214ENST00000626847 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
SMN2-214ENST00000626847 HOMEZQ8IX15 550 aa12.32□□□□□ -0.44
SMN2-214ENST00000626847 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
SMN2-214ENST00000626847 HECW2Q9P2P5 1572 aa12.32□□□□□ -0.44
SMN2-214ENST00000626847 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
SMN2-214ENST00000626847 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
SMN2-214ENST00000626847 NEFLP07196 543 aa12.3□□□□□ -0.44
SMN2-214ENST00000626847 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
SMN2-214ENST00000626847 ST18O60284 1047 aa12.29□□□□□ -0.44
SMN2-214ENST00000626847 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
SMN2-214ENST00000626847 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
SMN2-214ENST00000626847 PPP1R37O75864 691 aa12.28□□□□□ -0.44
SMN2-214ENST00000626847 FAM69CQ0P6D2 419 aa12.28□□□□□ -0.44
SMN2-214ENST00000626847 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
SMN2-214ENST00000626847 SOGA1O94964 1423 aa12.27□□□□□ -0.44
SMN2-214ENST00000626847 KDM6BO15054 1643 aa12.26□□□□□ -0.45
SMN2-214ENST00000626847 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
SMN2-214ENST00000626847 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
SMN2-214ENST00000626847 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
SMN2-214ENST00000626847 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
SMN2-214ENST00000626847 WDR97A6NE52 1622 aa12.25□□□□□ -0.45
SMN2-214ENST00000626847 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
SMN2-214ENST00000626847 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
SMN2-214ENST00000626847 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
SMN2-214ENST00000626847 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
SMN2-214ENST00000626847 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms