RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CDC42BPBQ9Y5S2 1711 aa26.39■■□□□ 1.81
UBE3D-208ENST00000626828 CCNB3Q8WWL7 1395 aa26.38■■□□□ 1.81
UBE3D-208ENST00000626828 APLP2Q06481 763 aa26.37■■□□□ 1.81
UBE3D-208ENST00000626828 CFDP1Q9UEE9 299 aaPredicted RBP26.37■■□□□ 1.81
UBE3D-208ENST00000626828 GPATCH8Q9UKJ3 1502 aaKnown RBP26.37■■□□□ 1.81
UBE3D-208ENST00000626828 ZNF777Q9ULD5 760 aaPredicted RBP26.36■■□□□ 1.81
UBE3D-208ENST00000626828 RICTORQ6R327 1708 aa26.35■■□□□ 1.81
UBE3D-208ENST00000626828 EHBP1L1Q8N3D4 1523 aa26.34■■□□□ 1.81
UBE3D-208ENST00000626828 FRMPD1Q5SYB0 1578 aa26.34■■□□□ 1.81
UBE3D-208ENST00000626828 PREX2Q70Z35 1606 aa26.34■■□□□ 1.81
UBE3D-208ENST00000626828 CDC42BPAQ5VT25 1732 aa26.34■■□□□ 1.81
UBE3D-208ENST00000626828 AFAP1Q8N556 730 aa26.33■■□□□ 1.81
UBE3D-208ENST00000626828 TIAM1Q13009 1591 aa26.33■■□□□ 1.8
UBE3D-208ENST00000626828 MAP3K1Q13233 1512 aa26.32■■□□□ 1.8
UBE3D-208ENST00000626828 POGZQ7Z3K3 1410 aa26.31■■□□□ 1.8
UBE3D-208ENST00000626828 MAGI2Q86UL8 1455 aa26.3■■□□□ 1.8
UBE3D-208ENST00000626828 KANK4Q5T7N3 995 aaPredicted RBP26.28■■□□□ 1.8
UBE3D-208ENST00000626828 MYT1LQ9UL68 1186 aa26.27■■□□□ 1.8
UBE3D-208ENST00000626828 ZNF518AQ6AHZ1 1483 aa26.27■■□□□ 1.8
UBE3D-208ENST00000626828 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
UBE3D-208ENST00000626828 ZMYM4Q5VZL5 1548 aa26.26■■□□□ 1.79
UBE3D-208ENST00000626828 ARID4BQ4LE39 1312 aaPredicted RBP26.25■■□□□ 1.79
UBE3D-208ENST00000626828 HNRNPMP52272 730 aaKnown RBP eCLIP26.24■■□□□ 1.79
UBE3D-208ENST00000626828 SUPT6HQ7KZ85 1726 aaKnown RBP26.24■■□□□ 1.79
UBE3D-208ENST00000626828 NCOA2Q15596 1464 aa26.23■■□□□ 1.79
UBE3D-208ENST00000626828 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
UBE3D-208ENST00000626828 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
UBE3D-208ENST00000626828 ZFYVE16Q7Z3T8 1539 aa26.21■■□□□ 1.79
UBE3D-208ENST00000626828 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
UBE3D-208ENST00000626828 YEATS2Q9ULM3 1422 aa26.21■■□□□ 1.79
UBE3D-208ENST00000626828 KIAA1107Q9UPP5 1409 aa26.21■■□□□ 1.79
UBE3D-208ENST00000626828 ABCC1P33527 1531 aa26.2■■□□□ 1.79
UBE3D-208ENST00000626828 ARHGEF40Q8TER5 1519 aa26.18■■□□□ 1.78
UBE3D-208ENST00000626828 ATP10AO60312 1499 aa26.17■■□□□ 1.78
UBE3D-208ENST00000626828 ZNF644Q9H582 1327 aaPredicted RBP26.17■■□□□ 1.78
UBE3D-208ENST00000626828 SAMD9LQ8IVG5 1584 aa26.17■■□□□ 1.78
UBE3D-208ENST00000626828 KDM5CP41229 1560 aa26.16■■□□□ 1.78
UBE3D-208ENST00000626828 ITSN2Q9NZM3 1697 aa26.16■■□□□ 1.78
UBE3D-208ENST00000626828 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
UBE3D-208ENST00000626828 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.77
UBE3D-208ENST00000626828 RSPH4AQ5TD94 716 aa26.13■■□□□ 1.77
UBE3D-208ENST00000626828 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
UBE3D-208ENST00000626828 HECW2Q9P2P5 1572 aa26.09■■□□□ 1.77
UBE3D-208ENST00000626828 C9orf84Q5VXU9 1444 aa26.08■■□□□ 1.77
UBE3D-208ENST00000626828 MBD5Q9P267 1494 aa26.05■■□□□ 1.76
UBE3D-208ENST00000626828 MLECQ14165 292 aa26.05■■□□□ 1.76
UBE3D-208ENST00000626828 BCORL1Q5H9F3 1711 aa26.04■■□□□ 1.76
UBE3D-208ENST00000626828 MYOM3Q5VTT5 1437 aa26.04■■□□□ 1.76
UBE3D-208ENST00000626828 ADAMTSL3P82987 1691 aa26.03■■□□□ 1.76
UBE3D-208ENST00000626828 MIA2Q96PC5 1412 aa26.03■■□□□ 1.76
UBE3D-208ENST00000626828 KIDINS220Q9ULH0 1771 aa26.02■■□□□ 1.76
UBE3D-208ENST00000626828 TSPY4P0CV99 314 aa26.01■■□□□ 1.75
UBE3D-208ENST00000626828 TSPY10P0CW01 314 aa26.01■■□□□ 1.75
UBE3D-208ENST00000626828 CAMSAP2Q08AD1 1489 aa26.01■■□□□ 1.75
UBE3D-208ENST00000626828 DIP2CQ9Y2E4 1556 aa26.01■■□□□ 1.75
UBE3D-208ENST00000626828 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
UBE3D-208ENST00000626828 ABCA6Q8N139 1617 aa25.97■■□□□ 1.75
UBE3D-208ENST00000626828 REREQ9P2R6 1566 aa25.97■■□□□ 1.75
UBE3D-208ENST00000626828 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
UBE3D-208ENST00000626828 ATP7AQ04656 1500 aa25.95■■□□□ 1.74
UBE3D-208ENST00000626828 CCDC141Q6ZP82 1450 aa25.95■■□□□ 1.74
UBE3D-208ENST00000626828 PTPRMP28827 1452 aa25.93■■□□□ 1.74
UBE3D-208ENST00000626828 AGLP35573 1532 aa25.93■■□□□ 1.74
UBE3D-208ENST00000626828 MADDQ8WXG6 1647 aa25.91■■□□□ 1.74
UBE3D-208ENST00000626828 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
UBE3D-208ENST00000626828 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
UBE3D-208ENST00000626828 ESF1Q9H501 851 aaKnown RBP25.89■■□□□ 1.74
UBE3D-208ENST00000626828 A2MP01023 1474 aa25.89■■□□□ 1.73
UBE3D-208ENST00000626828 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
UBE3D-208ENST00000626828 DHX29Q7Z478 1369 aaKnown RBP25.85■■□□□ 1.73
UBE3D-208ENST00000626828 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
UBE3D-208ENST00000626828 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
UBE3D-208ENST00000626828 PTPN23Q9H3S7 1636 aa25.83■■□□□ 1.73
UBE3D-208ENST00000626828 ADGBQ8N7X0 1667 aa25.83■■□□□ 1.73
UBE3D-208ENST00000626828 FER1L4A9Z1Z3 1794 aa25.82■■□□□ 1.72
UBE3D-208ENST00000626828 GGT6Q6P531 493 aa25.81■■□□□ 1.72
UBE3D-208ENST00000626828 PPARGC1BQ86YN6 1023 aaKnown RBP25.81■■□□□ 1.72
UBE3D-208ENST00000626828 PPP6R1Q9UPN7 881 aa25.81■■□□□ 1.72
UBE3D-208ENST00000626828 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
UBE3D-208ENST00000626828 FAM50AQ14320 339 aaKnown RBP25.78■■□□□ 1.72
UBE3D-208ENST00000626828 KIF3BO15066 747 aa25.77■■□□□ 1.72
UBE3D-208ENST00000626828 CEBPAP49715 358 aaPredicted RBP25.77■■□□□ 1.72
UBE3D-208ENST00000626828 ABCC5O15440 1437 aa25.77■■□□□ 1.72
UBE3D-208ENST00000626828 PLXNC1O60486 1568 aa25.77■■□□□ 1.72
UBE3D-208ENST00000626828 MAST1Q9Y2H9 1570 aa25.76■■□□□ 1.71
UBE3D-208ENST00000626828 CNTLNQ9NXG0 1405 aa25.74■■□□□ 1.71
UBE3D-208ENST00000626828 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
UBE3D-208ENST00000626828 DAPK1P53355 1430 aa25.71■■□□□ 1.71
UBE3D-208ENST00000626828 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
UBE3D-208ENST00000626828 RRP7BPQ9NSQ0 103 aa25.69■■□□□ 1.7
UBE3D-208ENST00000626828 SHANK2Q9UPX8 1470 aa25.68■■□□□ 1.7
UBE3D-208ENST00000626828 ZMYM3Q14202 1370 aa25.68■■□□□ 1.7
UBE3D-208ENST00000626828 DNMT1P26358 1616 aaKnown RBP25.67■■□□□ 1.7
UBE3D-208ENST00000626828 ANKRD30AQ9BXX3 1397 aa25.65■■□□□ 1.7
UBE3D-208ENST00000626828 KIF15Q9NS87 1388 aa25.63■■□□□ 1.69
UBE3D-208ENST00000626828 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
UBE3D-208ENST00000626828 DUOX2Q9NRD8 1548 aa25.62■■□□□ 1.69
UBE3D-208ENST00000626828 CROCC2H7BZ55 1655 aa25.61■■□□□ 1.69
UBE3D-208ENST00000626828 C3P01024 1663 aa25.6■■□□□ 1.69
UBE3D-208ENST00000626828 NCOA1Q15788 1441 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms