RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-208ENST00000625681 EFCAB5A4FU69 1503 aa37.66■■■■□ 3.62
UBE3A-208ENST00000625681 MAGI2Q86UL8 1455 aa37.64■■■■□ 3.62
UBE3A-208ENST00000625681 HECW1Q76N89 1606 aa37.64■■■■□ 3.62
UBE3A-208ENST00000625681 UBTFP17480 764 aaKnown RBP37.57■■■■□ 3.6
UBE3A-208ENST00000625681 EFCAB2Q5VUJ9 269 aa37.57■■■■□ 3.6
UBE3A-208ENST00000625681 CERKQ8TCT0 537 aa37.57■■■■□ 3.6
UBE3A-208ENST00000625681 CEBPAP49715 358 aaPredicted RBP37.56■■■■□ 3.6
UBE3A-208ENST00000625681 ATP10AO60312 1499 aa37.53■■■■□ 3.6
UBE3A-208ENST00000625681 AFAP1Q8N556 730 aa37.48■■■■□ 3.59
UBE3A-208ENST00000625681 CDK11AQ9UQ88 783 aaPredicted RBP37.48■■■■□ 3.59
UBE3A-208ENST00000625681 C9orf84Q5VXU9 1444 aa37.45■■■■□ 3.59
UBE3A-208ENST00000625681 FMN1Q68DA7 1419 aa37.44■■■■□ 3.58
UBE3A-208ENST00000625681 ARHGEF12Q9NZN5 1544 aa37.43■■■■□ 3.58
UBE3A-208ENST00000625681 FER1L4A9Z1Z3 1794 aa37.42■■■■□ 3.58
UBE3A-208ENST00000625681 MYT1LQ9UL68 1186 aa37.42■■■■□ 3.58
UBE3A-208ENST00000625681 ARHGAP35Q9NRY4 1499 aa37.39■■■■□ 3.58
UBE3A-208ENST00000625681 KIF14Q15058 1648 aa37.35■■■■□ 3.57
UBE3A-208ENST00000625681 ZNF518AQ6AHZ1 1483 aa37.33■■■■□ 3.57
UBE3A-208ENST00000625681 TROQ12816 1431 aaPredicted RBP37.32■■■■□ 3.56
UBE3A-208ENST00000625681 ARHGAP5Q13017 1502 aa37.31■■■■□ 3.56
UBE3A-208ENST00000625681 MYO5CQ9NQX4 1742 aa37.3■■■■□ 3.56
UBE3A-208ENST00000625681 DMRT2Q9Y5R5 561 aa37.26■■■■□ 3.56
UBE3A-208ENST00000625681 CLIP1P30622 1438 aa37.24■■■■□ 3.55
UBE3A-208ENST00000625681 PREX1Q8TCU6 1659 aa37.22■■■■□ 3.55
UBE3A-208ENST00000625681 UHRF1BP1Q6BDS2 1440 aa37.21■■■■□ 3.55
UBE3A-208ENST00000625681 KDM5CP41229 1560 aa37.21■■■■□ 3.55
UBE3A-208ENST00000625681 ESF1Q9H501 851 aaKnown RBP37.16■■■■□ 3.54
UBE3A-208ENST00000625681 TRAPPC8Q9Y2L5 1435 aa37.16■■■■□ 3.54
UBE3A-208ENST00000625681 DIP2CQ9Y2E4 1556 aa37.16■■■■□ 3.54
UBE3A-208ENST00000625681 MLH3Q9UHC1 1453 aa37.13■■■■□ 3.53
UBE3A-208ENST00000625681 STRCQ7RTU9 1775 aa37.12■■■■□ 3.53
UBE3A-208ENST00000625681 CHIC1Q5VXU3 224 aa37.12■■■■□ 3.53
UBE3A-208ENST00000625681 ABCA6Q8N139 1617 aa37.07■■■■□ 3.53
UBE3A-208ENST00000625681 DISP3Q9P2K9 1392 aa37.06■■■■□ 3.52
UBE3A-208ENST00000625681 ILDR2Q71H61 639 aa37.06■■■■□ 3.52
UBE3A-208ENST00000625681 LRRIQ1Q96JM4 1722 aa37.06■■■■□ 3.52
UBE3A-208ENST00000625681 CDC42BPBQ9Y5S2 1711 aa37.05■■■■□ 3.52
UBE3A-208ENST00000625681 REREQ9P2R6 1566 aa37.04■■■■□ 3.52
UBE3A-208ENST00000625681 ZNF777Q9ULD5 760 aaPredicted RBP37.02■■■■□ 3.52
UBE3A-208ENST00000625681 ABCC1P33527 1531 aa37■■■■□ 3.51
UBE3A-208ENST00000625681 PTPRTO14522 1441 aa37■■■■□ 3.51
UBE3A-208ENST00000625681 CASKIN1Q8WXD9 1431 aa37■■■■□ 3.51
UBE3A-208ENST00000625681 AGLP35573 1532 aa37■■■■□ 3.51
UBE3A-208ENST00000625681 C3P01024 1663 aa36.98■■■■□ 3.51
UBE3A-208ENST00000625681 SETD1BQ9UPS6 1966 aaKnown RBP36.97■■■■□ 3.51
UBE3A-208ENST00000625681 PREX2Q70Z35 1606 aa36.95■■■■□ 3.51
UBE3A-208ENST00000625681 CCDC18Q5T9S5 1454 aa36.93■■■■□ 3.5
UBE3A-208ENST00000625681 HNRNPMP52272 730 aaKnown RBP eCLIP36.92■■■■□ 3.5
UBE3A-208ENST00000625681 CNTLNQ9NXG0 1405 aa36.89■■■■□ 3.5
UBE3A-208ENST00000625681 ITSN2Q9NZM3 1697 aa36.89■■■■□ 3.5
UBE3A-208ENST00000625681 KIDINS220Q9ULH0 1771 aa36.89■■■■□ 3.5
UBE3A-208ENST00000625681 SPAG9O60271 1321 aaKnown RBP36.86■■■■□ 3.49
UBE3A-208ENST00000625681 NCOA1Q15788 1441 aa36.86■■■■□ 3.49
UBE3A-208ENST00000625681 ZMYM3Q14202 1370 aa36.85■■■■□ 3.49
UBE3A-208ENST00000625681 LTBP4Q8N2S1 1624 aa36.84■■■■□ 3.49
UBE3A-208ENST00000625681 NCKAP5LQ9HCH0 1330 aa36.83■■■■□ 3.49
UBE3A-208ENST00000625681 SOCS7O14512 581 aa36.82■■■■□ 3.48
UBE3A-208ENST00000625681 SAMD9LQ8IVG5 1584 aa36.82■■■■□ 3.48
UBE3A-208ENST00000625681 GPATCH8Q9UKJ3 1502 aaKnown RBP36.8■■■■□ 3.48
UBE3A-208ENST00000625681 CDC42BPAQ5VT25 1732 aa36.79■■■■□ 3.48
UBE3A-208ENST00000625681 NPATQ14207 1427 aa36.76■■■■□ 3.48
UBE3A-208ENST00000625681 SYCP2Q9BX26 1530 aa36.76■■■■□ 3.48
UBE3A-208ENST00000625681 CAMSAP1Q5T5Y3 1602 aa36.75■■■■□ 3.47
UBE3A-208ENST00000625681 CFDP1Q9UEE9 299 aaPredicted RBP36.75■■■■□ 3.47
UBE3A-208ENST00000625681 FYCO1Q9BQS8 1478 aa36.74■■■■□ 3.47
UBE3A-208ENST00000625681 GGT6Q6P531 493 aa36.73■■■■□ 3.47
UBE3A-208ENST00000625681 ZNF335Q9H4Z2 1342 aaPredicted RBP36.71■■■■□ 3.47
UBE3A-208ENST00000625681 KIAA1107Q9UPP5 1409 aa36.66■■■■□ 3.46
UBE3A-208ENST00000625681 CCNB3Q8WWL7 1395 aa36.66■■■■□ 3.46
UBE3A-208ENST00000625681 SUPT6HQ7KZ85 1726 aaKnown RBP36.65■■■■□ 3.46
UBE3A-208ENST00000625681 A2MP01023 1474 aa36.64■■■■□ 3.46
UBE3A-208ENST00000625681 IQSEC2Q5JU85 1478 aa36.64■■■■□ 3.46
UBE3A-208ENST00000625681 ATP7AQ04656 1500 aa36.64■■■■□ 3.46
UBE3A-208ENST00000625681 UBAP1LF5GYI3 381 aa36.63■■■■□ 3.45
UBE3A-208ENST00000625681 ZNF644Q9H582 1327 aaPredicted RBP36.62■■■■□ 3.45
UBE3A-208ENST00000625681 SPATA31D1Q6ZQQ2 1576 aa36.62■■■■□ 3.45
UBE3A-208ENST00000625681 MROH2AA6NES4 1674 aa36.61■■■■□ 3.45
UBE3A-208ENST00000625681 PTPRKQ15262 1439 aa36.6■■■■□ 3.45
UBE3A-208ENST00000625681 PKD2Q13563 968 aa36.6■■■■□ 3.45
UBE3A-208ENST00000625681 CLTCQ00610 1675 aaKnown RBP36.58■■■■□ 3.45
UBE3A-208ENST00000625681 PLEKHH2Q8IVE3 1493 aa36.57■■■■□ 3.45
UBE3A-208ENST00000625681 PLXNC1O60486 1568 aa36.55■■■■□ 3.44
UBE3A-208ENST00000625681 MTUS2Q5JR59 1369 aa36.54■■■■□ 3.44
UBE3A-208ENST00000625681 INO80Q9ULG1 1556 aaPredicted RBP36.53■■■■□ 3.44
UBE3A-208ENST00000625681 PPP6R1Q9UPN7 881 aa36.51■■■■□ 3.44
UBE3A-208ENST00000625681 PLA2R1Q13018 1463 aa36.5■■■■□ 3.43
UBE3A-208ENST00000625681 TCOF1Q13428 1488 aaKnown RBP36.49■■■■□ 3.43
UBE3A-208ENST00000625681 CEP170BQ9Y4F5 1589 aaPredicted RBP36.49■■■■□ 3.43
UBE3A-208ENST00000625681 MYO3AQ8NEV4 1616 aa36.48■■■■□ 3.43
UBE3A-208ENST00000625681 FBXO31Q5XUX0 539 aaPredicted RBP36.44■■■■□ 3.42
UBE3A-208ENST00000625681 MBD5Q9P267 1494 aa36.43■■■■□ 3.42
UBE3A-208ENST00000625681 ZNF142P52746 1687 aaPredicted RBP36.4■■■■□ 3.42
UBE3A-208ENST00000625681 DHX29Q7Z478 1369 aaKnown RBP36.4■■■■□ 3.42
UBE3A-208ENST00000625681 KIF3BO15066 747 aa36.38■■■■□ 3.41
UBE3A-208ENST00000625681 A2ML1A8K2U0 1454 aa36.37■■■■□ 3.41
UBE3A-208ENST00000625681 SCAF1Q9H7N4 1312 aaKnown RBP36.34■■■■□ 3.41
UBE3A-208ENST00000625681 TIAM1Q13009 1591 aa36.34■■■■□ 3.41
UBE3A-208ENST00000625681 RTEL1-TNFRSF6BF6WH68 1400 aa36.34■■■■□ 3.41
UBE3A-208ENST00000625681 PIP4K2BP78356 416 aa36.33■■■■□ 3.41
UBE3A-208ENST00000625681 ADGBQ8N7X0 1667 aa36.32■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms