RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 CCDC9Q9Y3X0 531 aaKnown RBP15.48■□□□□ 0.07
CHD2-205ENST00000625662 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
CHD2-205ENST00000625662 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
CHD2-205ENST00000625662 CHMP4AQ9BY43 222 aa15.48■□□□□ 0.07
CHD2-205ENST00000625662 STK26Q9P289 416 aa15.47■□□□□ 0.07
CHD2-205ENST00000625662 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
CHD2-205ENST00000625662 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
CHD2-205ENST00000625662 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
CHD2-205ENST00000625662 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
CHD2-205ENST00000625662 UPF2Q9HAU5 1272 aaKnown RBP15.43■□□□□ 0.06
CHD2-205ENST00000625662 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
CHD2-205ENST00000625662 SNAPC4Q5SXM2 1469 aa15.43■□□□□ 0.06
CHD2-205ENST00000625662 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
CHD2-205ENST00000625662 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHD2-205ENST00000625662 NGDNQ8NEJ9 315 aaKnown RBP15.42■□□□□ 0.06
CHD2-205ENST00000625662 TERF2IPQ9NYB0 399 aa15.42■□□□□ 0.06
CHD2-205ENST00000625662 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
CHD2-205ENST00000625662 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
CHD2-205ENST00000625662 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
CHD2-205ENST00000625662 SAFB2Q14151 953 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHD2-205ENST00000625662 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
CHD2-205ENST00000625662 MORC1Q86VD1 984 aa15.37■□□□□ 0.05
CHD2-205ENST00000625662 MPHOSPH9Q99550 1183 aa15.37■□□□□ 0.05
CHD2-205ENST00000625662 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
CHD2-205ENST00000625662 RTF1Q92541 710 aaKnown RBP15.37■□□□□ 0.05
CHD2-205ENST00000625662 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
CHD2-205ENST00000625662 SALL2Q9Y467 1007 aaPredicted RBP15.36■□□□□ 0.05
CHD2-205ENST00000625662 FOXD1Q16676 465 aa15.36■□□□□ 0.05
CHD2-205ENST00000625662 CUX1P39880 1505 aa15.35■□□□□ 0.05
CHD2-205ENST00000625662 STAC3Q96MF2 364 aa15.35■□□□□ 0.05
CHD2-205ENST00000625662 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
CHD2-205ENST00000625662 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
CHD2-205ENST00000625662 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
CHD2-205ENST00000625662 MS4A1P11836 297 aa15.34■□□□□ 0.05
CHD2-205ENST00000625662 SYNJ1O43426 1573 aa15.33■□□□□ 0.05
CHD2-205ENST00000625662 ROCK2O75116 1388 aaKnown RBP15.33■□□□□ 0.05
CHD2-205ENST00000625662 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
CHD2-205ENST00000625662 ATF3P18847 181 aa15.33■□□□□ 0.04
CHD2-205ENST00000625662 CALD1Q05682 793 aaKnown RBP15.33■□□□□ 0.04
CHD2-205ENST00000625662 KANK4Q5T7N3 995 aaPredicted RBP15.32■□□□□ 0.04
CHD2-205ENST00000625662 SOX12O15370 315 aa15.32■□□□□ 0.04
CHD2-205ENST00000625662 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
CHD2-205ENST00000625662 EFCAB5A4FU69 1503 aa15.29■□□□□ 0.04
CHD2-205ENST00000625662 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
CHD2-205ENST00000625662 THEMISQ8N1K5 641 aaPredicted RBP15.29■□□□□ 0.04
CHD2-205ENST00000625662 HSP90AA1P07900 732 aaKnown RBP15.29■□□□□ 0.04
CHD2-205ENST00000625662 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
CHD2-205ENST00000625662 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
CHD2-205ENST00000625662 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.03
CHD2-205ENST00000625662 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
CHD2-205ENST00000625662 EVA1CP58658 441 aa15.26■□□□□ 0.03
CHD2-205ENST00000625662 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
CHD2-205ENST00000625662 CASKIN1Q8WXD9 1431 aa15.24■□□□□ 0.03
CHD2-205ENST00000625662 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
CHD2-205ENST00000625662 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
CHD2-205ENST00000625662 AMPHP49418 695 aa15.24■□□□□ 0.03
CHD2-205ENST00000625662 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
CHD2-205ENST00000625662 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
CHD2-205ENST00000625662 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
CHD2-205ENST00000625662 HDAC5Q9UQL6 1122 aa15.22■□□□□ 0.03
CHD2-205ENST00000625662 EVC2Q86UK5 1308 aa15.22■□□□□ 0.03
CHD2-205ENST00000625662 KIF15Q9NS87 1388 aa15.21■□□□□ 0.03
CHD2-205ENST00000625662 CC2D1BQ5T0F9 858 aaKnown RBP15.21■□□□□ 0.03
CHD2-205ENST00000625662 DMRT2Q9Y5R5 561 aa15.21■□□□□ 0.02
CHD2-205ENST00000625662 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
CHD2-205ENST00000625662 KTN1Q86UP2 1357 aaKnown RBP15.2■□□□□ 0.02
CHD2-205ENST00000625662 HIRIP3Q9BW71 556 aaPredicted RBP15.2■□□□□ 0.02
CHD2-205ENST00000625662 KIF21BO75037 1637 aa15.19■□□□□ 0.02
CHD2-205ENST00000625662 ANP32AP39687 249 aaKnown RBP15.19■□□□□ 0.02
CHD2-205ENST00000625662 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
CHD2-205ENST00000625662 PHF23Q9BUL5 403 aaPredicted RBP15.19■□□□□ 0.02
CHD2-205ENST00000625662 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
CHD2-205ENST00000625662 PSME1Q06323 249 aa15.18■□□□□ 0.02
CHD2-205ENST00000625662 ANKLE2Q86XL3 938 aa15.18■□□□□ 0.02
CHD2-205ENST00000625662 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
CHD2-205ENST00000625662 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
CHD2-205ENST00000625662 OS9Q13438 667 aaPredicted RBP15.18■□□□□ 0.02
CHD2-205ENST00000625662 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
CHD2-205ENST00000625662 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
CHD2-205ENST00000625662 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
CHD2-205ENST00000625662 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
CHD2-205ENST00000625662 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
CHD2-205ENST00000625662 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
CHD2-205ENST00000625662 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
CHD2-205ENST00000625662 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
CHD2-205ENST00000625662 CUL7Q14999 1698 aa15.15■□□□□ 0.02
CHD2-205ENST00000625662 COG3Q96JB2 828 aa15.15■□□□□ 0.02
CHD2-205ENST00000625662 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
CHD2-205ENST00000625662 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
CHD2-205ENST00000625662 TXNDC2Q86VQ3 553 aa15.14■□□□□ 0.01
CHD2-205ENST00000625662 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
CHD2-205ENST00000625662 SLC52A1Q9NWF4 448 aa15.13■□□□□ 0.01
CHD2-205ENST00000625662 PLB1Q6P1J6 1458 aa15.12■□□□□ 0.01
CHD2-205ENST00000625662 IQGAP2Q13576 1575 aa15.12■□□□□ 0.01
CHD2-205ENST00000625662 RALBP1Q15311 655 aa15.12■□□□□ 0.01
CHD2-205ENST00000625662 TEX14Q8IWB6 1497 aa15.12■□□□□ 0.01
CHD2-205ENST00000625662 SCAPERQ9BY12 1400 aa15.11■□□□□ 0.01
CHD2-205ENST00000625662 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
CHD2-205ENST00000625662 AFAP1Q8N556 730 aa15.11■□□□□ 0.01
CHD2-205ENST00000625662 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms