RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 HECW2Q9P2P5 1572 aa38.91■■■■□ 3.82
ATXN3-252ENST00000620536 POGZQ7Z3K3 1410 aa38.89■■■■□ 3.82
ATXN3-252ENST00000620536 MAGI2Q86UL8 1455 aa38.89■■■■□ 3.82
ATXN3-252ENST00000620536 ZFYVE16Q7Z3T8 1539 aa38.89■■■■□ 3.82
ATXN3-252ENST00000620536 BCORL1Q5H9F3 1711 aa38.88■■■■□ 3.81
ATXN3-252ENST00000620536 FYCO1Q9BQS8 1478 aa38.86■■■■□ 3.81
ATXN3-252ENST00000620536 ARHGAP5Q13017 1502 aa38.86■■■■□ 3.81
ATXN3-252ENST00000620536 PTPRMP28827 1452 aa38.85■■■■□ 3.81
ATXN3-252ENST00000620536 YEATS2Q9ULM3 1422 aa38.84■■■■□ 3.81
ATXN3-252ENST00000620536 MADDQ8WXG6 1647 aa38.77■■■■□ 3.8
ATXN3-252ENST00000620536 ZNF518AQ6AHZ1 1483 aa38.73■■■■□ 3.79
ATXN3-252ENST00000620536 CDC42BPBQ9Y5S2 1711 aa38.69■■■■□ 3.78
ATXN3-252ENST00000620536 ATP10AO60312 1499 aa38.69■■■■□ 3.78
ATXN3-252ENST00000620536 AFAP1Q8N556 730 aa38.69■■■■□ 3.78
ATXN3-252ENST00000620536 PREX2Q70Z35 1606 aa38.67■■■■□ 3.78
ATXN3-252ENST00000620536 MYT1LQ9UL68 1186 aa38.67■■■■□ 3.78
ATXN3-252ENST00000620536 MLECQ14165 292 aa38.65■■■■□ 3.78
ATXN3-252ENST00000620536 C9orf84Q5VXU9 1444 aa38.64■■■■□ 3.78
ATXN3-252ENST00000620536 SIGLEC1Q9BZZ2 1709 aa38.64■■■■□ 3.78
ATXN3-252ENST00000620536 RIMS1Q86UR5 1692 aaKnown RBP38.64■■■■□ 3.78
ATXN3-252ENST00000620536 KDM5CP41229 1560 aa38.61■■■■□ 3.77
ATXN3-252ENST00000620536 ABCC1P33527 1531 aa38.56■■■■□ 3.76
ATXN3-252ENST00000620536 CEP162Q5TB80 1403 aa38.55■■■■□ 3.76
ATXN3-252ENST00000620536 CDC42BPAQ5VT25 1732 aa38.55■■■■□ 3.76
ATXN3-252ENST00000620536 PLPPR3Q6T4P5 718 aa38.55■■■■□ 3.76
ATXN3-252ENST00000620536 ZNF777Q9ULD5 760 aaPredicted RBP38.53■■■■□ 3.76
ATXN3-252ENST00000620536 ARHGEF12Q9NZN5 1544 aa38.53■■■■□ 3.76
ATXN3-252ENST00000620536 TRAPPC8Q9Y2L5 1435 aa38.52■■■■□ 3.76
ATXN3-252ENST00000620536 MTUS2Q5JR59 1369 aa38.51■■■■□ 3.76
ATXN3-252ENST00000620536 MLH3Q9UHC1 1453 aa38.51■■■■□ 3.76
ATXN3-252ENST00000620536 ITSN2Q9NZM3 1697 aa38.49■■■■□ 3.75
ATXN3-252ENST00000620536 GPATCH8Q9UKJ3 1502 aaKnown RBP38.48■■■■□ 3.75
ATXN3-252ENST00000620536 FER1L4A9Z1Z3 1794 aa38.47■■■■□ 3.75
ATXN3-252ENST00000620536 DIP2CQ9Y2E4 1556 aa38.46■■■■□ 3.75
ATXN3-252ENST00000620536 CCNB3Q8WWL7 1395 aa38.45■■■■□ 3.75
ATXN3-252ENST00000620536 CFDP1Q9UEE9 299 aaPredicted RBP38.43■■■■□ 3.74
ATXN3-252ENST00000620536 LMTK3Q96Q04 1460 aa38.41■■■■□ 3.74
ATXN3-252ENST00000620536 SAMD9LQ8IVG5 1584 aa38.4■■■■□ 3.74
ATXN3-252ENST00000620536 ABCA6Q8N139 1617 aa38.4■■■■□ 3.74
ATXN3-252ENST00000620536 REREQ9P2R6 1566 aa38.4■■■■□ 3.74
ATXN3-252ENST00000620536 HNRNPMP52272 730 aaKnown RBP eCLIP38.37■■■■□ 3.73
ATXN3-252ENST00000620536 SYCP2Q9BX26 1530 aa38.35■■■■□ 3.73
ATXN3-252ENST00000620536 PLEKHH2Q8IVE3 1493 aa38.34■■■■□ 3.73
ATXN3-252ENST00000620536 EHBP1L1Q8N3D4 1523 aa38.33■■■■□ 3.73
ATXN3-252ENST00000620536 LOC105371045A0A1W2PR82 267 aa38.33■■■■□ 3.73
ATXN3-252ENST00000620536 ILDR1Q86SU0 546 aaPredicted RBP38.33■■■■□ 3.73
ATXN3-252ENST00000620536 KIDINS220Q9ULH0 1771 aa38.31■■■■□ 3.72
ATXN3-252ENST00000620536 KIAA1107Q9UPP5 1409 aa38.31■■■■□ 3.72
ATXN3-252ENST00000620536 SPAG9O60271 1321 aaKnown RBP38.31■■■■□ 3.72
ATXN3-252ENST00000620536 AGLP35573 1532 aa38.29■■■■□ 3.72
ATXN3-252ENST00000620536 CEBPAP49715 358 aaPredicted RBP38.27■■■■□ 3.72
ATXN3-252ENST00000620536 ESF1Q9H501 851 aaKnown RBP38.27■■■■□ 3.72
ATXN3-252ENST00000620536 HSPA2P54652 639 aa38.26■■■■□ 3.72
ATXN3-252ENST00000620536 TIAM1Q13009 1591 aa38.23■■■■□ 3.71
ATXN3-252ENST00000620536 ATP7AQ04656 1500 aa38.17■■■■□ 3.7
ATXN3-252ENST00000620536 ZNF644Q9H582 1327 aaPredicted RBP38.17■■■■□ 3.7
ATXN3-252ENST00000620536 VPS8Q8N3P4 1428 aa38.14■■■■□ 3.7
ATXN3-252ENST00000620536 INO80Q9ULG1 1556 aaPredicted RBP38.12■■■■□ 3.69
ATXN3-252ENST00000620536 PREX1Q8TCU6 1659 aa38.11■■■■□ 3.69
ATXN3-252ENST00000620536 NCOA2Q15596 1464 aa38.11■■■■□ 3.69
ATXN3-252ENST00000620536 SUPT6HQ7KZ85 1726 aaKnown RBP38.11■■■■□ 3.69
ATXN3-252ENST00000620536 CNTLNQ9NXG0 1405 aa38.08■■■■□ 3.69
ATXN3-252ENST00000620536 A2MP01023 1474 aa38.07■■■■□ 3.68
ATXN3-252ENST00000620536 MBD5Q9P267 1494 aa38.07■■■■□ 3.68
ATXN3-252ENST00000620536 UHRF1BP1Q6BDS2 1440 aa38.05■■■■□ 3.68
ATXN3-252ENST00000620536 C3P01024 1663 aa38.04■■■■□ 3.68
ATXN3-252ENST00000620536 PLXNC1O60486 1568 aa38■■■■□ 3.67
ATXN3-252ENST00000620536 LRRC9Q6ZRR7 1453 aa37.99■■■■□ 3.67
ATXN3-252ENST00000620536 RTEL1-TNFRSF6BF6WH68 1400 aa37.98■■■■□ 3.67
ATXN3-252ENST00000620536 CAMSAP2Q08AD1 1489 aa37.96■■■■□ 3.67
ATXN3-252ENST00000620536 ADGBQ8N7X0 1667 aa37.96■■■■□ 3.67
ATXN3-252ENST00000620536 RSPH4AQ5TD94 716 aa37.96■■■■□ 3.67
ATXN3-252ENST00000620536 GGT6Q6P531 493 aa37.95■■■■□ 3.67
ATXN3-252ENST00000620536 SETD1BQ9UPS6 1966 aaKnown RBP37.95■■■■□ 3.67
ATXN3-252ENST00000620536 CCDC141Q6ZP82 1450 aa37.93■■■■□ 3.66
ATXN3-252ENST00000620536 FBXO41Q8TF61 875 aa37.93■■■■□ 3.66
ATXN3-252ENST00000620536 ZMYM3Q14202 1370 aa37.93■■■■□ 3.66
ATXN3-252ENST00000620536 MROH2AA6NES4 1674 aa37.91■■■■□ 3.66
ATXN3-252ENST00000620536 MAP3K1Q13233 1512 aa37.91■■■■□ 3.66
ATXN3-252ENST00000620536 KANK4Q5T7N3 995 aaPredicted RBP37.88■■■■□ 3.65
ATXN3-252ENST00000620536 PPP6R1Q9UPN7 881 aa37.87■■■■□ 3.65
ATXN3-252ENST00000620536 DMRT2Q9Y5R5 561 aa37.87■■■■□ 3.65
ATXN3-252ENST00000620536 DHX29Q7Z478 1369 aaKnown RBP37.86■■■■□ 3.65
ATXN3-252ENST00000620536 NPATQ14207 1427 aa37.86■■■■□ 3.65
ATXN3-252ENST00000620536 CLTCQ00610 1675 aaKnown RBP37.84■■■■□ 3.65
ATXN3-252ENST00000620536 TSPY4P0CV99 314 aa37.83■■■■□ 3.65
ATXN3-252ENST00000620536 TSPY10P0CW01 314 aa37.83■■■■□ 3.65
ATXN3-252ENST00000620536 APLP2Q06481 763 aa37.8■■■■□ 3.64
ATXN3-252ENST00000620536 ARHGEF5Q12774 1597 aa37.8■■■■□ 3.64
ATXN3-252ENST00000620536 STRCQ7RTU9 1775 aa37.77■■■■□ 3.64
ATXN3-252ENST00000620536 KIF3BO15066 747 aa37.76■■■■□ 3.64
ATXN3-252ENST00000620536 MYOM3Q5VTT5 1437 aa37.72■■■■□ 3.63
ATXN3-252ENST00000620536 MIA2Q96PC5 1412 aa37.72■■■■□ 3.63
ATXN3-252ENST00000620536 CERKQ8TCT0 537 aa37.72■■■■□ 3.63
ATXN3-252ENST00000620536 PTPRKQ15262 1439 aa37.7■■■■□ 3.63
ATXN3-252ENST00000620536 PTPRTO14522 1441 aa37.65■■■■□ 3.62
ATXN3-252ENST00000620536 NCOA1Q15788 1441 aa37.63■■■■□ 3.61
ATXN3-252ENST00000620536 WASHC2CQ9Y4E1 1318 aa37.61■■■■□ 3.61
ATXN3-252ENST00000620536 CAMSAP1Q5T5Y3 1602 aa37.61■■■■□ 3.61
ATXN3-252ENST00000620536 MYO3AQ8NEV4 1616 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms