RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 BCORL1Q5H9F3 1711 aa14.44□□□□□ -0.1
TARDBP-222ENST00000620505 CFAP74Q9C0B2 1584 aa14.44□□□□□ -0.1
TARDBP-222ENST00000620505 ARHGEF40Q8TER5 1519 aa14.44□□□□□ -0.1
TARDBP-222ENST00000620505 FMN1Q68DA7 1419 aa14.42□□□□□ -0.1
TARDBP-222ENST00000620505 YEATS2Q9ULM3 1422 aa14.42□□□□□ -0.1
TARDBP-222ENST00000620505 HECW1Q76N89 1606 aa14.42□□□□□ -0.1
TARDBP-222ENST00000620505 MLECQ14165 292 aa14.42□□□□□ -0.1
TARDBP-222ENST00000620505 SCAPERQ9BY12 1400 aa14.41□□□□□ -0.1
TARDBP-222ENST00000620505 PLCH2O75038 1416 aa14.41□□□□□ -0.1
TARDBP-222ENST00000620505 RIMS1Q86UR5 1692 aaKnown RBP14.4□□□□□ -0.1
TARDBP-222ENST00000620505 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
TARDBP-222ENST00000620505 KIF14Q15058 1648 aa14.39□□□□□ -0.11
TARDBP-222ENST00000620505 SIGLEC1Q9BZZ2 1709 aa14.38□□□□□ -0.11
TARDBP-222ENST00000620505 ZMYM4Q5VZL5 1548 aa14.38□□□□□ -0.11
TARDBP-222ENST00000620505 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
TARDBP-222ENST00000620505 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
TARDBP-222ENST00000620505 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
TARDBP-222ENST00000620505 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
TARDBP-222ENST00000620505 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
TARDBP-222ENST00000620505 TROQ12816 1431 aaPredicted RBP14.35□□□□□ -0.11
TARDBP-222ENST00000620505 MYT1LQ9UL68 1186 aa14.35□□□□□ -0.11
TARDBP-222ENST00000620505 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
TARDBP-222ENST00000620505 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
TARDBP-222ENST00000620505 HSPA2P54652 639 aa14.34□□□□□ -0.11
TARDBP-222ENST00000620505 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
TARDBP-222ENST00000620505 ARHGAP5Q13017 1502 aa14.34□□□□□ -0.11
TARDBP-222ENST00000620505 MAGI2Q86UL8 1455 aa14.33□□□□□ -0.12
TARDBP-222ENST00000620505 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.12
TARDBP-222ENST00000620505 CLIP1P30622 1438 aa14.32□□□□□ -0.12
TARDBP-222ENST00000620505 AFAP1Q8N556 730 aa14.32□□□□□ -0.12
TARDBP-222ENST00000620505 ATP10AO60312 1499 aa14.31□□□□□ -0.12
TARDBP-222ENST00000620505 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
TARDBP-222ENST00000620505 FER1L4A9Z1Z3 1794 aa14.28□□□□□ -0.12
TARDBP-222ENST00000620505 CEBPAP49715 358 aaPredicted RBP14.28□□□□□ -0.12
TARDBP-222ENST00000620505 CASKIN1Q8WXD9 1431 aa14.28□□□□□ -0.12
TARDBP-222ENST00000620505 ZNF518AQ6AHZ1 1483 aa14.27□□□□□ -0.12
TARDBP-222ENST00000620505 CDC42BPBQ9Y5S2 1711 aa14.26□□□□□ -0.13
TARDBP-222ENST00000620505 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
TARDBP-222ENST00000620505 ARHGEF12Q9NZN5 1544 aa14.25□□□□□ -0.13
TARDBP-222ENST00000620505 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
TARDBP-222ENST00000620505 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
TARDBP-222ENST00000620505 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
TARDBP-222ENST00000620505 KDM5CP41229 1560 aa14.23□□□□□ -0.13
TARDBP-222ENST00000620505 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
TARDBP-222ENST00000620505 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
TARDBP-222ENST00000620505 ABCC1P33527 1531 aa14.21□□□□□ -0.13
TARDBP-222ENST00000620505 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
TARDBP-222ENST00000620505 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
TARDBP-222ENST00000620505 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
TARDBP-222ENST00000620505 CDC42BPAQ5VT25 1732 aa14.19□□□□□ -0.14
TARDBP-222ENST00000620505 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
TARDBP-222ENST00000620505 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.14
TARDBP-222ENST00000620505 ESF1Q9H501 851 aaKnown RBP14.17□□□□□ -0.14
TARDBP-222ENST00000620505 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-222ENST00000620505 PREX1Q8TCU6 1659 aa14.16□□□□□ -0.14
TARDBP-222ENST00000620505 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
TARDBP-222ENST00000620505 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
TARDBP-222ENST00000620505 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
TARDBP-222ENST00000620505 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
TARDBP-222ENST00000620505 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
TARDBP-222ENST00000620505 CFDP1Q9UEE9 299 aaPredicted RBP14.13□□□□□ -0.15
TARDBP-222ENST00000620505 UHRF1BP1Q6BDS2 1440 aa14.13□□□□□ -0.15
TARDBP-222ENST00000620505 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
TARDBP-222ENST00000620505 AGLP35573 1532 aa14.12□□□□□ -0.15
TARDBP-222ENST00000620505 C3P01024 1663 aa14.12□□□□□ -0.15
TARDBP-222ENST00000620505 CERKQ8TCT0 537 aa14.12□□□□□ -0.15
TARDBP-222ENST00000620505 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
TARDBP-222ENST00000620505 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
TARDBP-222ENST00000620505 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
TARDBP-222ENST00000620505 SUPT6HQ7KZ85 1726 aaKnown RBP14.08□□□□□ -0.16
TARDBP-222ENST00000620505 C1QBPQ07021 282 aaKnown RBP14.08□□□□□ -0.16
TARDBP-222ENST00000620505 STRCQ7RTU9 1775 aa14.07□□□□□ -0.16
TARDBP-222ENST00000620505 ATP7AQ04656 1500 aa14.07□□□□□ -0.16
TARDBP-222ENST00000620505 CEP162Q5TB80 1403 aa14.06□□□□□ -0.16
TARDBP-222ENST00000620505 GGT6Q6P531 493 aa14.05□□□□□ -0.16
TARDBP-222ENST00000620505 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
TARDBP-222ENST00000620505 KIAA1107Q9UPP5 1409 aa14.05□□□□□ -0.16
TARDBP-222ENST00000620505 PLEKHH2Q8IVE3 1493 aa14.05□□□□□ -0.16
TARDBP-222ENST00000620505 TIAM1Q13009 1591 aa14.05□□□□□ -0.16
TARDBP-222ENST00000620505 A2MP01023 1474 aa14.04□□□□□ -0.16
TARDBP-222ENST00000620505 EHBP1L1Q8N3D4 1523 aa14.04□□□□□ -0.16
TARDBP-222ENST00000620505 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
TARDBP-222ENST00000620505 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
TARDBP-222ENST00000620505 CLTCQ00610 1675 aaKnown RBP14.02□□□□□ -0.16
TARDBP-222ENST00000620505 SETD1BQ9UPS6 1966 aaKnown RBP14.02□□□□□ -0.17
TARDBP-222ENST00000620505 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
TARDBP-222ENST00000620505 PLXNC1O60486 1568 aa14□□□□□ -0.17
TARDBP-222ENST00000620505 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
TARDBP-222ENST00000620505 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
TARDBP-222ENST00000620505 PTPRTO14522 1441 aa13.98□□□□□ -0.17
TARDBP-222ENST00000620505 CAMSAP1Q5T5Y3 1602 aa13.98□□□□□ -0.17
TARDBP-222ENST00000620505 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
TARDBP-222ENST00000620505 NCOA2Q15596 1464 aa13.98□□□□□ -0.17
TARDBP-222ENST00000620505 NPATQ14207 1427 aa13.98□□□□□ -0.17
TARDBP-222ENST00000620505 NCOA1Q15788 1441 aa13.98□□□□□ -0.17
TARDBP-222ENST00000620505 PPP4R3CPQ6ZMV5 832 aa13.97□□□□□ -0.17
TARDBP-222ENST00000620505 ADGBQ8N7X0 1667 aa13.97□□□□□ -0.17
TARDBP-222ENST00000620505 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
TARDBP-222ENST00000620505 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
TARDBP-222ENST00000620505 MYO3AQ8NEV4 1616 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms