RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 PLB1Q6P1J6 1458 aa23.93■■□□□ 1.42
SEMA3B-213ENST00000618865 DAPK1P53355 1430 aa23.92■■□□□ 1.42
SEMA3B-213ENST00000618865 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
SEMA3B-213ENST00000618865 ABCC5O15440 1437 aa23.9■■□□□ 1.42
SEMA3B-213ENST00000618865 DNMT1P26358 1616 aaKnown RBP23.89■■□□□ 1.41
SEMA3B-213ENST00000618865 FOXD1Q16676 465 aa23.89■■□□□ 1.41
SEMA3B-213ENST00000618865 MPHOSPH9Q99550 1183 aa23.87■■□□□ 1.41
SEMA3B-213ENST00000618865 KIF14Q15058 1648 aa23.84■■□□□ 1.41
SEMA3B-213ENST00000618865 NUP160Q12769 1436 aa23.84■■□□□ 1.41
SEMA3B-213ENST00000618865 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
SEMA3B-213ENST00000618865 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
SEMA3B-213ENST00000618865 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.41
SEMA3B-213ENST00000618865 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
SEMA3B-213ENST00000618865 CAMSAP2Q08AD1 1489 aa23.78■■□□□ 1.4
SEMA3B-213ENST00000618865 GPATCH8Q9UKJ3 1502 aaKnown RBP23.77■■□□□ 1.4
SEMA3B-213ENST00000618865 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
SEMA3B-213ENST00000618865 ADCY10Q96PN6 1610 aa23.75■■□□□ 1.39
SEMA3B-213ENST00000618865 CFDP1Q9UEE9 299 aaPredicted RBP23.75■■□□□ 1.39
SEMA3B-213ENST00000618865 ITSN2Q9NZM3 1697 aa23.74■■□□□ 1.39
SEMA3B-213ENST00000618865 L3MBTL2Q969R5 705 aa23.74■■□□□ 1.39
SEMA3B-213ENST00000618865 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
SEMA3B-213ENST00000618865 SUPT16HQ9Y5B9 1047 aaKnown RBP23.73■■□□□ 1.39
SEMA3B-213ENST00000618865 ANP32CO43423 234 aa23.72■■□□□ 1.39
SEMA3B-213ENST00000618865 ANKRD30BQ9BXX2 1392 aa23.71■■□□□ 1.39
SEMA3B-213ENST00000618865 HSPA5P11021 654 aaKnown RBP23.71■■□□□ 1.39
SEMA3B-213ENST00000618865 ABCA8O94911 1581 aa23.7■■□□□ 1.38
SEMA3B-213ENST00000618865 ADGBQ8N7X0 1667 aa23.68■■□□□ 1.38
SEMA3B-213ENST00000618865 SLC4A1APQ9BWU0 796 aaKnown RBP23.67■■□□□ 1.38
SEMA3B-213ENST00000618865 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
SEMA3B-213ENST00000618865 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
SEMA3B-213ENST00000618865 CCER2I3L3R5 266 aa23.66■■□□□ 1.38
SEMA3B-213ENST00000618865 RPRD2Q5VT52 1461 aaKnown RBP23.66■■□□□ 1.38
SEMA3B-213ENST00000618865 ATP10BO94823 1461 aa23.66■■□□□ 1.38
SEMA3B-213ENST00000618865 CDC42BPAQ5VT25 1732 aa23.66■■□□□ 1.38
SEMA3B-213ENST00000618865 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
SEMA3B-213ENST00000618865 PZPP20742 1482 aa23.65■■□□□ 1.38
SEMA3B-213ENST00000618865 TEX14Q8IWB6 1497 aa23.64■■□□□ 1.37
SEMA3B-213ENST00000618865 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
SEMA3B-213ENST00000618865 ABCC10Q5T3U5 1492 aa23.61■■□□□ 1.37
SEMA3B-213ENST00000618865 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
SEMA3B-213ENST00000618865 ADGRL2O95490 1459 aa23.6■■□□□ 1.37
SEMA3B-213ENST00000618865 EIF4G2P78344 907 aaKnown RBP eCLIP23.6■■□□□ 1.37
SEMA3B-213ENST00000618865 C11orf95C9JLR9 678 aaPredicted RBP23.58■■□□□ 1.36
SEMA3B-213ENST00000618865 CHD1O14646 1710 aa23.54■■□□□ 1.36
SEMA3B-213ENST00000618865 ANKRD30AQ9BXX3 1397 aa23.53■■□□□ 1.36
SEMA3B-213ENST00000618865 PTPRGP23470 1445 aa23.51■■□□□ 1.35
SEMA3B-213ENST00000618865 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
SEMA3B-213ENST00000618865 PKD2Q13563 968 aa23.49■■□□□ 1.35
SEMA3B-213ENST00000618865 C9orf84Q5VXU9 1444 aa23.49■■□□□ 1.35
SEMA3B-213ENST00000618865 KIAA1107Q9UPP5 1409 aa23.49■■□□□ 1.35
SEMA3B-213ENST00000618865 HNRNPMP52272 730 aaKnown RBP eCLIP23.47■■□□□ 1.35
SEMA3B-213ENST00000618865 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
SEMA3B-213ENST00000618865 CNTLNQ9NXG0 1405 aa23.46■■□□□ 1.35
SEMA3B-213ENST00000618865 SPATA31E1Q6ZUB1 1445 aa23.45■■□□□ 1.34
SEMA3B-213ENST00000618865 SHANK2Q9UPX8 1470 aa23.45■■□□□ 1.34
SEMA3B-213ENST00000618865 CDC42BPBQ9Y5S2 1711 aa23.44■■□□□ 1.34
SEMA3B-213ENST00000618865 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
SEMA3B-213ENST00000618865 BCANQ96GW7 911 aa23.42■■□□□ 1.34
SEMA3B-213ENST00000618865 DAXXQ9UER7 740 aaPredicted RBP23.42■■□□□ 1.34
SEMA3B-213ENST00000618865 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
SEMA3B-213ENST00000618865 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
SEMA3B-213ENST00000618865 FKBP8Q14318 412 aa23.41■■□□□ 1.34
SEMA3B-213ENST00000618865 CCDC184Q52MB2 194 aa23.41■■□□□ 1.34
SEMA3B-213ENST00000618865 NUP155O75694 1391 aa23.41■■□□□ 1.34
SEMA3B-213ENST00000618865 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
SEMA3B-213ENST00000618865 TSPY4P0CV99 314 aa23.39■■□□□ 1.33
SEMA3B-213ENST00000618865 TSPY10P0CW01 314 aa23.39■■□□□ 1.33
SEMA3B-213ENST00000618865 KIF7Q2M1P5 1343 aa23.38■■□□□ 1.33
SEMA3B-213ENST00000618865 POLR1AO95602 1720 aaPredicted RBP23.38■■□□□ 1.33
SEMA3B-213ENST00000618865 PREX2Q70Z35 1606 aa23.38■■□□□ 1.33
SEMA3B-213ENST00000618865 SHROOM2Q13796 1616 aa23.38■■□□□ 1.33
SEMA3B-213ENST00000618865 KIF15Q9NS87 1388 aa23.37■■□□□ 1.33
SEMA3B-213ENST00000618865 ARHGEF5Q12774 1597 aa23.37■■□□□ 1.33
SEMA3B-213ENST00000618865 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
SEMA3B-213ENST00000618865 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
SEMA3B-213ENST00000618865 BCORL1Q5H9F3 1711 aa23.33■■□□□ 1.33
SEMA3B-213ENST00000618865 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.32
SEMA3B-213ENST00000618865 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
SEMA3B-213ENST00000618865 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
SEMA3B-213ENST00000618865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.32
SEMA3B-213ENST00000618865 SYCP2Q9BX26 1530 aa23.29■■□□□ 1.32
SEMA3B-213ENST00000618865 USP47Q96K76 1375 aa23.29■■□□□ 1.32
SEMA3B-213ENST00000618865 KDM5CP41229 1560 aa23.27■■□□□ 1.32
SEMA3B-213ENST00000618865 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
SEMA3B-213ENST00000618865 ABCC2Q92887 1545 aa23.25■■□□□ 1.31
SEMA3B-213ENST00000618865 EIF5BO60841 1220 aaKnown RBP23.25■■□□□ 1.31
SEMA3B-213ENST00000618865 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
SEMA3B-213ENST00000618865 UHRF1BP1Q6BDS2 1440 aa23.23■■□□□ 1.31
SEMA3B-213ENST00000618865 TSHZ2Q9NRE2 1034 aa23.23■■□□□ 1.31
SEMA3B-213ENST00000618865 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
SEMA3B-213ENST00000618865 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
SEMA3B-213ENST00000618865 NEFLP07196 543 aa23.22■■□□□ 1.31
SEMA3B-213ENST00000618865 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
SEMA3B-213ENST00000618865 RALGAPBQ86X10 1494 aa23.21■■□□□ 1.31
SEMA3B-213ENST00000618865 FAM9BQ8IZU0 186 aa23.2■■□□□ 1.3
SEMA3B-213ENST00000618865 MRS2Q9HD23 443 aa23.2■■□□□ 1.3
SEMA3B-213ENST00000618865 CNGB1Q14028 1251 aaPredicted RBP23.19■■□□□ 1.3
SEMA3B-213ENST00000618865 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
SEMA3B-213ENST00000618865 DHX29Q7Z478 1369 aaKnown RBP23.18■■□□□ 1.3
SEMA3B-213ENST00000618865 DCAF11Q8TEB1 546 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms