RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 FANCAO15360 1455 aa7.04□□□□□ -1.28
SYCP1-210ENST00000618516 ADRA2BP18089 450 aa7.04□□□□□ -1.28
SYCP1-210ENST00000618516 ESF1Q9H501 851 aaKnown RBP7.04□□□□□ -1.28
SYCP1-210ENST00000618516 HECW1Q76N89 1606 aa7.04□□□□□ -1.28
SYCP1-210ENST00000618516 UHRF1BP1LA0JNW5 1464 aa7.04□□□□□ -1.28
SYCP1-210ENST00000618516 TSPY4P0CV99 314 aa7.03□□□□□ -1.28
SYCP1-210ENST00000618516 TSPY10P0CW01 314 aa7.03□□□□□ -1.28
SYCP1-210ENST00000618516 LRRIQ1Q96JM4 1722 aa7.03□□□□□ -1.28
SYCP1-210ENST00000618516 CCDC18Q5T9S5 1454 aa7.03□□□□□ -1.28
SYCP1-210ENST00000618516 FYCO1Q9BQS8 1478 aa7.02□□□□□ -1.29
SYCP1-210ENST00000618516 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
SYCP1-210ENST00000618516 SPAG9O60271 1321 aaKnown RBP7.02□□□□□ -1.29
SYCP1-210ENST00000618516 TTC37Q6PGP7 1564 aa7.02□□□□□ -1.29
SYCP1-210ENST00000618516 ADGRL1O94910 1474 aa7.02□□□□□ -1.29
SYCP1-210ENST00000618516 PHLDB1Q86UU1 1377 aa7.01□□□□□ -1.29
SYCP1-210ENST00000618516 KDM6BO15054 1643 aa7.01□□□□□ -1.29
SYCP1-210ENST00000618516 CACNB1Q02641 598 aaPredicted RBP7.01□□□□□ -1.29
SYCP1-210ENST00000618516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.01□□□□□ -1.29
SYCP1-210ENST00000618516 AKNAQ7Z591 1439 aa7.01□□□□□ -1.29
SYCP1-210ENST00000618516 KIF13AQ9H1H9 1805 aa7.01□□□□□ -1.29
SYCP1-210ENST00000618516 KIF3BO15066 747 aa7.01□□□□□ -1.29
SYCP1-210ENST00000618516 YEATS2Q9ULM3 1422 aa7□□□□□ -1.29
SYCP1-210ENST00000618516 NCOA2Q15596 1464 aa7□□□□□ -1.29
SYCP1-210ENST00000618516 TRAPPC8Q9Y2L5 1435 aa6.99□□□□□ -1.29
SYCP1-210ENST00000618516 HSPA2P54652 639 aa6.99□□□□□ -1.29
SYCP1-210ENST00000618516 LRRC9Q6ZRR7 1453 aa6.99□□□□□ -1.29
SYCP1-210ENST00000618516 TRIM52Q96A61 297 aa6.98□□□□□ -1.29
SYCP1-210ENST00000618516 KDM4FA0A1W2PPD8 638 aa6.98□□□□□ -1.29
SYCP1-210ENST00000618516 TEX14Q8IWB6 1497 aa6.98□□□□□ -1.29
SYCP1-210ENST00000618516 PLCH2O75038 1416 aa6.98□□□□□ -1.29
SYCP1-210ENST00000618516 DENND4BO75064 1496 aaPredicted RBP6.98□□□□□ -1.29
SYCP1-210ENST00000618516 GPATCH8Q9UKJ3 1502 aaKnown RBP6.97□□□□□ -1.29
SYCP1-210ENST00000618516 CHGAP10645 457 aaKnown RBP6.97□□□□□ -1.29
SYCP1-210ENST00000618516 PCGF6Q9BYE7 350 aa6.96□□□□□ -1.29
SYCP1-210ENST00000618516 TIAM1Q13009 1591 aa6.96□□□□□ -1.3
SYCP1-210ENST00000618516 SYCP2Q9BX26 1530 aa6.96□□□□□ -1.3
SYCP1-210ENST00000618516 ARHGEF12Q9NZN5 1544 aa6.95□□□□□ -1.3
SYCP1-210ENST00000618516 NUTM2DQ5VT03 806 aaPredicted RBP6.94□□□□□ -1.3
SYCP1-210ENST00000618516 DMRT2Q9Y5R5 561 aa6.94□□□□□ -1.3
SYCP1-210ENST00000618516 WASHC2CQ9Y4E1 1318 aa6.94□□□□□ -1.3
SYCP1-210ENST00000618516 FBXO31Q5XUX0 539 aaPredicted RBP6.94□□□□□ -1.3
SYCP1-210ENST00000618516 BCANQ96GW7 911 aa6.93□□□□□ -1.3
SYCP1-210ENST00000618516 MYOM3Q5VTT5 1437 aa6.92□□□□□ -1.3
SYCP1-210ENST00000618516 EHBP1L1Q8N3D4 1523 aa6.92□□□□□ -1.3
SYCP1-210ENST00000618516 CAMSAP2Q08AD1 1489 aa6.92□□□□□ -1.3
SYCP1-210ENST00000618516 STAG3Q9UJ98 1225 aa6.92□□□□□ -1.3
SYCP1-210ENST00000618516 ABCA9Q8IUA7 1624 aa6.91□□□□□ -1.3
SYCP1-210ENST00000618516 MAP3K4Q9Y6R4 1608 aa6.91□□□□□ -1.3
SYCP1-210ENST00000618516 FGD6Q6ZV73 1430 aa6.91□□□□□ -1.3
SYCP1-210ENST00000618516 PPRC1Q5VV67 1664 aaKnown RBP6.91□□□□□ -1.3
SYCP1-210ENST00000618516 POGZQ7Z3K3 1410 aa6.9□□□□□ -1.3
SYCP1-210ENST00000618516 SUPT6HQ7KZ85 1726 aaKnown RBP6.9□□□□□ -1.31
SYCP1-210ENST00000618516 MYO5CQ9NQX4 1742 aa6.9□□□□□ -1.31
SYCP1-210ENST00000618516 KIF15Q9NS87 1388 aa6.89□□□□□ -1.31
SYCP1-210ENST00000618516 ZNF518AQ6AHZ1 1483 aa6.89□□□□□ -1.31
SYCP1-210ENST00000618516 CFAP43Q8NDM7 1665 aa6.89□□□□□ -1.31
SYCP1-210ENST00000618516 NEO1Q92859 1461 aa6.89□□□□□ -1.31
SYCP1-210ENST00000618516 GLI2P10070 1586 aa6.89□□□□□ -1.31
SYCP1-210ENST00000618516 SAMD9LQ8IVG5 1584 aa6.89□□□□□ -1.31
SYCP1-210ENST00000618516 CDC42BPBQ9Y5S2 1711 aa6.88□□□□□ -1.31
SYCP1-210ENST00000618516 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
SYCP1-210ENST00000618516 CDC42BPAQ5VT25 1732 aa6.88□□□□□ -1.31
SYCP1-210ENST00000618516 RGL3Q3MIN7 710 aa6.87□□□□□ -1.31
SYCP1-210ENST00000618516 CFAP65Q6ZU64 1925 aaKnown RBP6.87□□□□□ -1.31
SYCP1-210ENST00000618516 RBM33Q96EV2 1170 aaKnown RBP6.87□□□□□ -1.31
SYCP1-210ENST00000618516 PTPRKQ15262 1439 aa6.87□□□□□ -1.31
SYCP1-210ENST00000618516 ZFYVE16Q7Z3T8 1539 aa6.86□□□□□ -1.31
SYCP1-210ENST00000618516 PLEKHH2Q8IVE3 1493 aa6.86□□□□□ -1.31
SYCP1-210ENST00000618516 ABCC5O15440 1437 aa6.86□□□□□ -1.31
SYCP1-210ENST00000618516 CCDC141Q6ZP82 1450 aa6.86□□□□□ -1.31
SYCP1-210ENST00000618516 ZNF326Q5BKZ1 582 aaKnown RBP6.86□□□□□ -1.31
SYCP1-210ENST00000618516 SLC4A1APQ9BWU0 796 aaKnown RBP6.86□□□□□ -1.31
SYCP1-210ENST00000618516 ANKRD30AQ9BXX3 1397 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 PREX2Q70Z35 1606 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 NEUROD1Q13562 356 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 ABCC1P33527 1531 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 MBD5Q9P267 1494 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 DAPK1P53355 1430 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 NUP155O75694 1391 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 ARAP3Q8WWN8 1544 aa6.85□□□□□ -1.31
SYCP1-210ENST00000618516 PTPN23Q9H3S7 1636 aa6.84□□□□□ -1.31
SYCP1-210ENST00000618516 SCAF1Q9H7N4 1312 aaKnown RBP6.84□□□□□ -1.31
SYCP1-210ENST00000618516 ATP10AO60312 1499 aa6.84□□□□□ -1.31
SYCP1-210ENST00000618516 A2MP01023 1474 aa6.84□□□□□ -1.31
SYCP1-210ENST00000618516 FRMPD1Q5SYB0 1578 aa6.83□□□□□ -1.32
SYCP1-210ENST00000618516 RSPH4AQ5TD94 716 aa6.83□□□□□ -1.32
SYCP1-210ENST00000618516 ATP7AQ04656 1500 aa6.83□□□□□ -1.32
SYCP1-210ENST00000618516 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
SYCP1-210ENST00000618516 PKD2Q13563 968 aa6.82□□□□□ -1.32
SYCP1-210ENST00000618516 KDM2AQ9Y2K7 1162 aa6.82□□□□□ -1.32
SYCP1-210ENST00000618516 SRCAPQ6ZRS2 3230 aa6.82□□□□□ -1.32
SYCP1-210ENST00000618516 ZMYM3Q14202 1370 aa6.82□□□□□ -1.32
SYCP1-210ENST00000618516 ANKRD50Q9ULJ7 1429 aa6.82□□□□□ -1.32
SYCP1-210ENST00000618516 PPP1R15AO75807 674 aaPredicted RBP6.82□□□□□ -1.32
SYCP1-210ENST00000618516 DHX29Q7Z478 1369 aaKnown RBP6.81□□□□□ -1.32
SYCP1-210ENST00000618516 SIGLEC1Q9BZZ2 1709 aa6.81□□□□□ -1.32
SYCP1-210ENST00000618516 MIA2Q96PC5 1412 aa6.81□□□□□ -1.32
SYCP1-210ENST00000618516 KIAA1107Q9UPP5 1409 aa6.81□□□□□ -1.32
SYCP1-210ENST00000618516 NCKAP5LQ9HCH0 1330 aa6.81□□□□□ -1.32
SYCP1-210ENST00000618516 HECW2Q9P2P5 1572 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms