RNA–Protein interactions for RNA: ENST00000618035.4

RCC1L-205, Transcript of RCC1 like, humanhuman

TSL 1 (best) BASIC

Gene RCC1L, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-205ENST00000618035 PREX2Q70Z35 1606 aa42.7■■■■■ 4.43
RCC1L-205ENST00000618035 CDC42BPAQ5VT25 1732 aa42.7■■■■■ 4.43
RCC1L-205ENST00000618035 SCAPERQ9BY12 1400 aa42.69■■■■■ 4.42
RCC1L-205ENST00000618035 VPS8Q8N3P4 1428 aa42.68■■■■■ 4.42
RCC1L-205ENST00000618035 ZMYM4Q5VZL5 1548 aa42.62■■■■■ 4.41
RCC1L-205ENST00000618035 POGZQ7Z3K3 1410 aa42.61■■■■■ 4.41
RCC1L-205ENST00000618035 MTUS2Q5JR59 1369 aa42.61■■■■■ 4.41
RCC1L-205ENST00000618035 GPATCH8Q9UKJ3 1502 aaKnown RBP42.56■■■■■ 4.4
RCC1L-205ENST00000618035 EHBP1L1Q8N3D4 1523 aa42.56■■■■■ 4.4
RCC1L-205ENST00000618035 ARHGEF40Q8TER5 1519 aa42.55■■■■■ 4.4
RCC1L-205ENST00000618035 TIAM1Q13009 1591 aa42.53■■■■■ 4.4
RCC1L-205ENST00000618035 YEATS2Q9ULM3 1422 aa42.5■■■■■ 4.39
RCC1L-205ENST00000618035 ARHGEF12Q9NZN5 1544 aa42.5■■■■■ 4.39
RCC1L-205ENST00000618035 ABCC1P33527 1531 aa42.49■■■■■ 4.39
RCC1L-205ENST00000618035 MAGI2Q86UL8 1455 aa42.46■■■■■ 4.39
RCC1L-205ENST00000618035 ZFYVE16Q7Z3T8 1539 aa42.46■■■■■ 4.39
RCC1L-205ENST00000618035 KDM5CP41229 1560 aa42.44■■■■■ 4.38
RCC1L-205ENST00000618035 ZNF518AQ6AHZ1 1483 aa42.44■■■■■ 4.38
RCC1L-205ENST00000618035 SAMD9LQ8IVG5 1584 aa42.44■■■■■ 4.38
RCC1L-205ENST00000618035 AFAP1Q8N556 730 aa42.44■■■■■ 4.38
RCC1L-205ENST00000618035 ITSN2Q9NZM3 1697 aa42.44■■■■■ 4.38
RCC1L-205ENST00000618035 CCNB3Q8WWL7 1395 aa42.43■■■■■ 4.38
RCC1L-205ENST00000618035 SIGLEC1Q9BZZ2 1709 aa42.42■■■■■ 4.38
RCC1L-205ENST00000618035 TRAPPC8Q9Y2L5 1435 aa42.4■■■■■ 4.38
RCC1L-205ENST00000618035 ZNF777Q9ULD5 760 aaPredicted RBP42.36■■■■■ 4.37
RCC1L-205ENST00000618035 MAP3K1Q13233 1512 aa42.35■■■■■ 4.37
RCC1L-205ENST00000618035 SUPT6HQ7KZ85 1726 aaKnown RBP42.34■■■■■ 4.37
RCC1L-205ENST00000618035 LRRC9Q6ZRR7 1453 aa42.34■■■■■ 4.37
RCC1L-205ENST00000618035 CFDP1Q9UEE9 299 aaPredicted RBP42.34■■■■■ 4.37
RCC1L-205ENST00000618035 NCOA2Q15596 1464 aa42.33■■■■■ 4.37
RCC1L-205ENST00000618035 BCORL1Q5H9F3 1711 aa42.32■■■■■ 4.36
RCC1L-205ENST00000618035 ADAMTSL3P82987 1691 aa42.31■■■■■ 4.36
RCC1L-205ENST00000618035 KANK4Q5T7N3 995 aaPredicted RBP42.3■■■■■ 4.36
RCC1L-205ENST00000618035 SYCP2Q9BX26 1530 aa42.3■■■■■ 4.36
RCC1L-205ENST00000618035 HECW2Q9P2P5 1572 aa42.29■■■■■ 4.36
RCC1L-205ENST00000618035 MLH3Q9UHC1 1453 aa42.26■■■■■ 4.36
RCC1L-205ENST00000618035 ARID4BQ4LE39 1312 aaPredicted RBP42.26■■■■■ 4.36
RCC1L-205ENST00000618035 ATP10AO60312 1499 aa42.25■■■■■ 4.35
RCC1L-205ENST00000618035 HNRNPMP52272 730 aaKnown RBP eCLIP42.24■■■■■ 4.352e-10■■■□□ 19.1
RCC1L-205ENST00000618035 KIAA1107Q9UPP5 1409 aa42.23■■■■■ 4.35
RCC1L-205ENST00000618035 ZNF644Q9H582 1327 aaPredicted RBP42.22■■■■■ 4.35
RCC1L-205ENST00000618035 DIP2CQ9Y2E4 1556 aa42.21■■■■■ 4.35
RCC1L-205ENST00000618035 KIDINS220Q9ULH0 1771 aa42.2■■■■■ 4.35
RCC1L-205ENST00000618035 ABCA6Q8N139 1617 aa42.2■■■■■ 4.35
RCC1L-205ENST00000618035 PLEKHH2Q8IVE3 1493 aa42.19■■■■■ 4.34
RCC1L-205ENST00000618035 C9orf84Q5VXU9 1444 aa42.19■■■■■ 4.34
RCC1L-205ENST00000618035 MADDQ8WXG6 1647 aa42.16■■■■■ 4.34
RCC1L-205ENST00000618035 MYT1LQ9UL68 1186 aa42.12■■■■■ 4.33
RCC1L-205ENST00000618035 MBD5Q9P267 1494 aa42.11■■■■■ 4.33
RCC1L-205ENST00000618035 REREQ9P2R6 1566 aa42.08■■■■■ 4.33
RCC1L-205ENST00000618035 PTPRMP28827 1452 aa42.07■■■■■ 4.32
RCC1L-205ENST00000618035 CAMSAP2Q08AD1 1489 aa42.04■■■■■ 4.32
RCC1L-205ENST00000618035 INO80Q9ULG1 1556 aaPredicted RBP42.04■■■■■ 4.32
RCC1L-205ENST00000618035 SPAG9O60271 1321 aaKnown RBP42.03■■■■■ 4.32
RCC1L-205ENST00000618035 RIMS1Q86UR5 1692 aaKnown RBP42.02■■■■■ 4.32
RCC1L-205ENST00000618035 ATP7AQ04656 1500 aa42.01■■■■■ 4.32
RCC1L-205ENST00000618035 APLP2Q06481 763 aa42.01■■■■■ 4.32
RCC1L-205ENST00000618035 MLECQ14165 292 aa42.01■■■■■ 4.32
RCC1L-205ENST00000618035 FER1L4A9Z1Z3 1794 aa41.94■■■■■ 4.3
RCC1L-205ENST00000618035 MYOM3Q5VTT5 1437 aa41.94■■■■■ 4.3
RCC1L-205ENST00000618035 AGLP35573 1532 aa41.94■■■■■ 4.3
RCC1L-205ENST00000618035 CCDC141Q6ZP82 1450 aa41.88■■■■■ 4.29
RCC1L-205ENST00000618035 MIA2Q96PC5 1412 aa41.87■■■■■ 4.29
RCC1L-205ENST00000618035 ARHGEF5Q12774 1597 aa41.86■■■■■ 4.29
RCC1L-205ENST00000618035 RTEL1-TNFRSF6BF6WH68 1400 aa41.84■■■■■ 4.29
RCC1L-205ENST00000618035 PLXNC1O60486 1568 aa41.84■■■■■ 4.29
RCC1L-205ENST00000618035 RSPH4AQ5TD94 716 aa41.8■■■■■ 4.28
RCC1L-205ENST00000618035 ADGBQ8N7X0 1667 aa41.8■■■■■ 4.28
RCC1L-205ENST00000618035 A2MP01023 1474 aa41.8■■■■■ 4.28
RCC1L-205ENST00000618035 PTPN23Q9H3S7 1636 aa41.71■■■■■ 4.27
RCC1L-205ENST00000618035 PLPPR3Q6T4P5 718 aa41.69■■■■■ 4.27
RCC1L-205ENST00000618035 FGD6Q6ZV73 1430 aa41.68■■■■■ 4.26
RCC1L-205ENST00000618035 MAST1Q9Y2H9 1570 aa41.66■■■■■ 4.26
RCC1L-205ENST00000618035 TSPY4P0CV99 314 aa41.64■■■■■ 4.26
RCC1L-205ENST00000618035 TSPY10P0CW01 314 aa41.64■■■■■ 4.26
RCC1L-205ENST00000618035 CEBPAP49715 358 aaPredicted RBP41.64■■■■■ 4.26
RCC1L-205ENST00000618035 DHX29Q7Z478 1369 aaKnown RBP41.64■■■■■ 4.26
RCC1L-205ENST00000618035 TCOF1Q13428 1488 aaKnown RBP41.63■■■■■ 4.25
RCC1L-205ENST00000618035 LMTK3Q96Q04 1460 aa41.59■■■■■ 4.25
RCC1L-205ENST00000618035 C3P01024 1663 aa41.59■■■■■ 4.25
RCC1L-205ENST00000618035 ABCC5O15440 1437 aa41.56■■■■■ 4.24
RCC1L-205ENST00000618035 CROCC2H7BZ55 1655 aa41.55■■■■■ 4.24
RCC1L-205ENST00000618035 GGT6Q6P531 493 aa41.52■■■■■ 4.24
RCC1L-205ENST00000618035 DNMT1P26358 1616 aaKnown RBP41.51■■■■■ 4.24
RCC1L-205ENST00000618035 CNTLNQ9NXG0 1405 aa41.51■■■■■ 4.24
RCC1L-205ENST00000618035 ESF1Q9H501 851 aaKnown RBP41.5■■■■■ 4.23
RCC1L-205ENST00000618035 MROH2AA6NES4 1674 aa41.49■■■■■ 4.23
RCC1L-205ENST00000618035 CLTCQ00610 1675 aaKnown RBP41.49■■■■■ 4.23
RCC1L-205ENST00000618035 DAPK1P53355 1430 aa41.48■■■■■ 4.23
RCC1L-205ENST00000618035 SHANK2Q9UPX8 1470 aa41.46■■■■■ 4.23
RCC1L-205ENST00000618035 KIF3BO15066 747 aa41.45■■■■■ 4.23
RCC1L-205ENST00000618035 PPARGC1BQ86YN6 1023 aaKnown RBP41.44■■■■■ 4.22
RCC1L-205ENST00000618035 ZMYM3Q14202 1370 aa41.42■■■■■ 4.22
RCC1L-205ENST00000618035 PREX1Q8TCU6 1659 aa41.42■■■■■ 4.22
RCC1L-205ENST00000618035 SETD1BQ9UPS6 1966 aaKnown RBP41.4■■■■■ 4.22
RCC1L-205ENST00000618035 PPP6R1Q9UPN7 881 aa41.38■■■■■ 4.22
RCC1L-205ENST00000618035 HSPA2P54652 639 aa41.35■■■■■ 4.21
RCC1L-205ENST00000618035 DUOX2Q9NRD8 1548 aa41.33■■■■■ 4.21
RCC1L-205ENST00000618035 EIF2AK4Q9P2K8 1649 aaKnown RBP41.33■■■■■ 4.21
RCC1L-205ENST00000618035 FAM50AQ14320 339 aaKnown RBP41.32■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms