RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 ANKRD30BQ9BXX2 1392 aa24.18■■□□□ 1.46
DDX1-207ENST00000617198 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
DDX1-207ENST00000617198 ARID3CA6NKF2 412 aa24.17■■□□□ 1.46
DDX1-207ENST00000617198 C11orf95C9JLR9 678 aaPredicted RBP24.15■■□□□ 1.46
DDX1-207ENST00000617198 TEX14Q8IWB6 1497 aa24.14■■□□□ 1.45
DDX1-207ENST00000617198 ABCC5O15440 1437 aa24.14■■□□□ 1.45
DDX1-207ENST00000617198 PRKRIP1Q9H875 184 aaPredicted RBP24.13■■□□□ 1.45
DDX1-207ENST00000617198 CCDC184Q52MB2 194 aa24.12■■□□□ 1.45
DDX1-207ENST00000617198 ERICH6BQ5W0A0 696 aa24.12■■□□□ 1.45
DDX1-207ENST00000617198 NBPF8Q3BBV2 869 aa24.1■■□□□ 1.45
DDX1-207ENST00000617198 IRX6P78412 446 aaPredicted RBP24.1■■□□□ 1.45
DDX1-207ENST00000617198 KIAA0556O60303 1618 aa24.1■■□□□ 1.45
DDX1-207ENST00000617198 POLR1AO95602 1720 aaPredicted RBP24.09■■□□□ 1.45
DDX1-207ENST00000617198 MRC2Q9UBG0 1479 aa24.09■■□□□ 1.45
DDX1-207ENST00000617198 SPATA31E1Q6ZUB1 1445 aa24.07■■□□□ 1.44
DDX1-207ENST00000617198 NUP153P49790 1475 aaKnown RBP24.07■■□□□ 1.44
DDX1-207ENST00000617198 DISP1Q96F81 1524 aa24.07■■□□□ 1.44
DDX1-207ENST00000617198 KIAA0586Q9BVV6 1533 aa24.07■■□□□ 1.44
DDX1-207ENST00000617198 SLC4A1APQ9BWU0 796 aaKnown RBP24.07■■□□□ 1.44
DDX1-207ENST00000617198 CDK11AQ9UQ88 783 aaPredicted RBP24.06■■□□□ 1.44
DDX1-207ENST00000617198 ZNF644Q9H582 1327 aaPredicted RBP24.05■■□□□ 1.44
DDX1-207ENST00000617198 RAPGEF6Q8TEU7 1601 aa24.05■■□□□ 1.44
DDX1-207ENST00000617198 MRS2Q9HD23 443 aa24.05■■□□□ 1.44
DDX1-207ENST00000617198 KIF7Q2M1P5 1343 aa24.04■■□□□ 1.44
DDX1-207ENST00000617198 FAM9BQ8IZU0 186 aa24.03■■□□□ 1.44
DDX1-207ENST00000617198 ZBED9Q6R2W3 1325 aa24.03■■□□□ 1.44
DDX1-207ENST00000617198 PPP4R2Q9NY27 417 aa24.01■■□□□ 1.43
DDX1-207ENST00000617198 IFT140Q96RY7 1462 aa24■■□□□ 1.43
DDX1-207ENST00000617198 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
DDX1-207ENST00000617198 PZPP20742 1482 aa23.99■■□□□ 1.43
DDX1-207ENST00000617198 FANCIQ9NVI1 1328 aa23.98■■□□□ 1.43
DDX1-207ENST00000617198 CAMSAP2Q08AD1 1489 aa23.96■■□□□ 1.43
DDX1-207ENST00000617198 ADGBQ8N7X0 1667 aa23.95■■□□□ 1.43
DDX1-207ENST00000617198 TROQ12816 1431 aaPredicted RBP23.95■■□□□ 1.42
DDX1-207ENST00000617198 ITSN2Q9NZM3 1697 aa23.95■■□□□ 1.42
DDX1-207ENST00000617198 MSH5O43196 834 aa23.94■■□□□ 1.42
DDX1-207ENST00000617198 GRIN2AQ12879 1464 aa23.93■■□□□ 1.42
DDX1-207ENST00000617198 MBD5Q9P267 1494 aa23.93■■□□□ 1.42
DDX1-207ENST00000617198 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
DDX1-207ENST00000617198 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
DDX1-207ENST00000617198 KIAA1107Q9UPP5 1409 aa23.9■■□□□ 1.42
DDX1-207ENST00000617198 ADGRL2O95490 1459 aa23.9■■□□□ 1.42
DDX1-207ENST00000617198 GPATCH8Q9UKJ3 1502 aaKnown RBP23.88■■□□□ 1.41
DDX1-207ENST00000617198 CROCC2H7BZ55 1655 aa23.88■■□□□ 1.41
DDX1-207ENST00000617198 ADCY10Q96PN6 1610 aa23.87■■□□□ 1.41
DDX1-207ENST00000617198 DHX29Q7Z478 1369 aaKnown RBP23.86■■□□□ 1.41
DDX1-207ENST00000617198 KIF14Q15058 1648 aa23.86■■□□□ 1.41
DDX1-207ENST00000617198 USP47Q96K76 1375 aa23.85■■□□□ 1.41
DDX1-207ENST00000617198 BCORL1Q5H9F3 1711 aa23.84■■□□□ 1.41
DDX1-207ENST00000617198 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
DDX1-207ENST00000617198 ANKRD30AQ9BXX3 1397 aa23.82■■□□□ 1.4
DDX1-207ENST00000617198 ARID4BQ4LE39 1312 aaPredicted RBP23.82■■□□□ 1.4
DDX1-207ENST00000617198 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
DDX1-207ENST00000617198 B4GALNT3Q6L9W6 998 aa23.82■■□□□ 1.4
DDX1-207ENST00000617198 KDM5CP41229 1560 aa23.81■■□□□ 1.4
DDX1-207ENST00000617198 PKD2Q13563 968 aa23.81■■□□□ 1.4
DDX1-207ENST00000617198 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
DDX1-207ENST00000617198 ZNF777Q9ULD5 760 aaPredicted RBP23.8■■□□□ 1.4
DDX1-207ENST00000617198 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
DDX1-207ENST00000617198 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
DDX1-207ENST00000617198 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
DDX1-207ENST00000617198 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
DDX1-207ENST00000617198 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
DDX1-207ENST00000617198 ERICH6Q7L0X2 663 aa23.75■■□□□ 1.39
DDX1-207ENST00000617198 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
DDX1-207ENST00000617198 RALGAPBQ86X10 1494 aa23.74■■□□□ 1.39
DDX1-207ENST00000617198 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
DDX1-207ENST00000617198 NUDCQ9Y266 331 aa23.73■■□□□ 1.39
DDX1-207ENST00000617198 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
DDX1-207ENST00000617198 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
DDX1-207ENST00000617198 CHMP7Q8WUX9 453 aaPredicted RBP23.71■■□□□ 1.39
DDX1-207ENST00000617198 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
DDX1-207ENST00000617198 ARHGEF12Q9NZN5 1544 aa23.7■■□□□ 1.39
DDX1-207ENST00000617198 CDC42BPAQ5VT25 1732 aa23.7■■□□□ 1.38
DDX1-207ENST00000617198 CNGB1Q14028 1251 aaPredicted RBP23.7■■□□□ 1.38
DDX1-207ENST00000617198 RNF123Q5XPI4 1314 aa23.69■■□□□ 1.38
DDX1-207ENST00000617198 NUP155O75694 1391 aa23.69■■□□□ 1.38
DDX1-207ENST00000617198 C9orf84Q5VXU9 1444 aa23.68■■□□□ 1.38
DDX1-207ENST00000617198 KDM5DQ9BY66 1539 aa23.67■■□□□ 1.38
DDX1-207ENST00000617198 PNISRQ8TF01 805 aaKnown RBP23.66■■□□□ 1.38
DDX1-207ENST00000617198 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
DDX1-207ENST00000617198 ABCC10Q5T3U5 1492 aa23.65■■□□□ 1.38
DDX1-207ENST00000617198 PLEKHD1A6NEE1 506 aa23.65■■□□□ 1.38
DDX1-207ENST00000617198 JPH4Q96JJ6 628 aa23.64■■□□□ 1.38
DDX1-207ENST00000617198 KIF15Q9NS87 1388 aa23.64■■□□□ 1.37
DDX1-207ENST00000617198 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
DDX1-207ENST00000617198 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
DDX1-207ENST00000617198 NUP160Q12769 1436 aa23.63■■□□□ 1.37
DDX1-207ENST00000617198 ABCA8O94911 1581 aa23.62■■□□□ 1.37
DDX1-207ENST00000617198 TSPY4P0CV99 314 aa23.6■■□□□ 1.37
DDX1-207ENST00000617198 TSPY10P0CW01 314 aa23.6■■□□□ 1.37
DDX1-207ENST00000617198 FBLN2P98095 1184 aa23.59■■□□□ 1.37
DDX1-207ENST00000617198 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
DDX1-207ENST00000617198 ATP10BO94823 1461 aa23.59■■□□□ 1.37
DDX1-207ENST00000617198 PTPRGP23470 1445 aa23.59■■□□□ 1.37
DDX1-207ENST00000617198 LRPPRCP42704 1394 aaKnown RBP23.57■■□□□ 1.36
DDX1-207ENST00000617198 ST20-MTHFSA0A0A6YYL1 179 aa23.57■■□□□ 1.36
DDX1-207ENST00000617198 CCDC136Q96JN2 1154 aa23.57■■□□□ 1.36
DDX1-207ENST00000617198 BRD4O60885 1362 aaPredicted RBP23.56■■□□□ 1.36
DDX1-207ENST00000617198 KDM2AQ9Y2K7 1162 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms