RNA–Protein interactions for RNA: ENST00000615949.6

ZNF248-209, Transcript of zinc finger protein 248, humanhuman

TSL 5 BASIC

Gene ZNF248, Length 518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-209ENST00000615949 MAP3K13O43283 966 aa10.36□□□□□ -0.75
ZNF248-209ENST00000615949 IFNL1Q8IU54 200 aa10.36□□□□□ -0.75
ZNF248-209ENST00000615949 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
ZNF248-209ENST00000615949 ABCA10Q8WWZ4 1543 aa10.35□□□□□ -0.75
ZNF248-209ENST00000615949 NLRP6P59044 892 aa10.35□□□□□ -0.75
ZNF248-209ENST00000615949 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
ZNF248-209ENST00000615949 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
ZNF248-209ENST00000615949 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
ZNF248-209ENST00000615949 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
ZNF248-209ENST00000615949 FAM9AQ8IZU1 332 aaPredicted RBP10.34□□□□□ -0.75
ZNF248-209ENST00000615949 CUX2O14529 1486 aa10.34□□□□□ -0.75
ZNF248-209ENST00000615949 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
ZNF248-209ENST00000615949 TARBP1Q13395 1621 aaKnown RBP10.31□□□□□ -0.76
ZNF248-209ENST00000615949 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
ZNF248-209ENST00000615949 CABP2Q9NPB3 220 aa10.3□□□□□ -0.76
ZNF248-209ENST00000615949 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
ZNF248-209ENST00000615949 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
ZNF248-209ENST00000615949 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
ZNF248-209ENST00000615949 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
ZNF248-209ENST00000615949 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
ZNF248-209ENST00000615949 GAPVD1Q14C86 1478 aa10.28□□□□□ -0.76
ZNF248-209ENST00000615949 IGF1RP08069 1367 aa10.26□□□□□ -0.77
ZNF248-209ENST00000615949 AQRO60306 1485 aaKnown RBP eCLIP10.24□□□□□ -0.77
ZNF248-209ENST00000615949 GRIN2BQ13224 1484 aa10.24□□□□□ -0.77
ZNF248-209ENST00000615949 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
ZNF248-209ENST00000615949 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
ZNF248-209ENST00000615949 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
ZNF248-209ENST00000615949 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
ZNF248-209ENST00000615949 CLCN6P51797 869 aa10.22□□□□□ -0.77
ZNF248-209ENST00000615949 CARMIL1Q5VZK9 1371 aa10.22□□□□□ -0.77
ZNF248-209ENST00000615949 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.77
ZNF248-209ENST00000615949 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
ZNF248-209ENST00000615949 PHF12Q96QT6 1004 aa10.21□□□□□ -0.77
ZNF248-209ENST00000615949 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
ZNF248-209ENST00000615949 EIF4G3O43432 1585 aaKnown RBP10.21□□□□□ -0.78
ZNF248-209ENST00000615949 CUL7Q14999 1698 aa10.2□□□□□ -0.78
ZNF248-209ENST00000615949 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
ZNF248-209ENST00000615949 PRXQ9BXM0 1461 aa10.2□□□□□ -0.78
ZNF248-209ENST00000615949 KIF21BO75037 1637 aa10.19□□□□□ -0.78
ZNF248-209ENST00000615949 GOLGA3Q08378 1498 aa10.19□□□□□ -0.78
ZNF248-209ENST00000615949 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
ZNF248-209ENST00000615949 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
ZNF248-209ENST00000615949 RAPGEF2Q9Y4G8 1499 aa10.18□□□□□ -0.78
ZNF248-209ENST00000615949 FHAD1B1AJZ9 1412 aa10.18□□□□□ -0.78
ZNF248-209ENST00000615949 LOC105371045A0A1W2PR82 267 aa10.18□□□□□ -0.78
ZNF248-209ENST00000615949 UBTFP17480 764 aaKnown RBP10.18□□□□□ -0.78
ZNF248-209ENST00000615949 CADPS2Q86UW7 1296 aa10.18□□□□□ -0.78
ZNF248-209ENST00000615949 MAGI1Q96QZ7 1491 aaPredicted RBP10.17□□□□□ -0.78
ZNF248-209ENST00000615949 PDE4AP27815 886 aa10.17□□□□□ -0.78
ZNF248-209ENST00000615949 TIE1P35590 1138 aa10.16□□□□□ -0.78
ZNF248-209ENST00000615949 PPP1R37O75864 691 aa10.15□□□□□ -0.78
ZNF248-209ENST00000615949 E2F4Q16254 413 aa10.15□□□□□ -0.78
ZNF248-209ENST00000615949 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
ZNF248-209ENST00000615949 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
ZNF248-209ENST00000615949 SNAPC4Q5SXM2 1469 aa10.15□□□□□ -0.78
ZNF248-209ENST00000615949 SYNJ2O15056 1496 aa10.13□□□□□ -0.79
ZNF248-209ENST00000615949 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
ZNF248-209ENST00000615949 MS4A3Q96HJ5 214 aa10.13□□□□□ -0.79
ZNF248-209ENST00000615949 ADAMTS12P58397 1594 aa10.13□□□□□ -0.79
ZNF248-209ENST00000615949 TNIKQ9UKE5 1360 aa10.13□□□□□ -0.79
ZNF248-209ENST00000615949 GRIN2AQ12879 1464 aa10.09□□□□□ -0.79
ZNF248-209ENST00000615949 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
ZNF248-209ENST00000615949 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
ZNF248-209ENST00000615949 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
ZNF248-209ENST00000615949 SMYD5Q6GMV2 418 aa10.05□□□□□ -0.8
ZNF248-209ENST00000615949 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
ZNF248-209ENST00000615949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■□□ 14.8
ZNF248-209ENST00000615949 KIAA0586Q9BVV6 1533 aa10.04□□□□□ -0.8
ZNF248-209ENST00000615949 MFSD10Q14728 455 aa10.04□□□□□ -0.8
ZNF248-209ENST00000615949 HAX1O00165 279 aa10.03□□□□□ -0.8
ZNF248-209ENST00000615949 NUP160Q12769 1436 aa10.03□□□□□ -0.8
ZNF248-209ENST00000615949 CRISPLD2Q9H0B8 497 aa10.03□□□□□ -0.8
ZNF248-209ENST00000615949 CEP162Q5TB80 1403 aa10.02□□□□□ -0.81
ZNF248-209ENST00000615949 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
ZNF248-209ENST00000615949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
ZNF248-209ENST00000615949 CTTNBP2Q8WZ74 1663 aa10.02□□□□□ -0.81
ZNF248-209ENST00000615949 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
ZNF248-209ENST00000615949 CLIP1P30622 1438 aa10.01□□□□□ -0.81
ZNF248-209ENST00000615949 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
ZNF248-209ENST00000615949 BMP2KQ9NSY1 1161 aaPredicted RBP10.01□□□□□ -0.81
ZNF248-209ENST00000615949 TRPC6Q9Y210 931 aa10.01□□□□□ -0.81
ZNF248-209ENST00000615949 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
ZNF248-209ENST00000615949 CHD1O14646 1710 aa10.01□□□□□ -0.81
ZNF248-209ENST00000615949 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
ZNF248-209ENST00000615949 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
ZNF248-209ENST00000615949 IQGAP2Q13576 1575 aa10□□□□□ -0.81
ZNF248-209ENST00000615949 CEP170Q5SW79 1584 aa9.99□□□□□ -0.81
ZNF248-209ENST00000615949 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
ZNF248-209ENST00000615949 G3V3G9 751 aa9.97□□□□□ -0.81
ZNF248-209ENST00000615949 IER5LQ5T953 404 aa9.97□□□□□ -0.81
ZNF248-209ENST00000615949 EFCAB5A4FU69 1503 aa9.97□□□□□ -0.81
ZNF248-209ENST00000615949 TESPA1A2RU30 521 aaPredicted RBP9.96□□□□□ -0.82
ZNF248-209ENST00000615949 CAMK2BQ13554 666 aa9.96□□□□□ -0.82
ZNF248-209ENST00000615949 GPHNQ9NQX3 736 aaPredicted RBP9.96□□□□□ -0.82
ZNF248-209ENST00000615949 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.82
ZNF248-209ENST00000615949 UGGT2Q9NYU1 1516 aa9.96□□□□□ -0.82
ZNF248-209ENST00000615949 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
ZNF248-209ENST00000615949 ARHGAP35Q9NRY4 1499 aa9.94□□□□□ -0.82
ZNF248-209ENST00000615949 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
ZNF248-209ENST00000615949 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms