RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 VASPP50552 380 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P24-202ENST00000615653 KHSRPQ92945 711 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMGB1P24-202ENST00000615653 POTEEQ6S8J3 1075 aa9.58□□□□□ -0.88
HMGB1P24-202ENST00000615653 SOX12O15370 315 aa9.53□□□□□ -0.88
HMGB1P24-202ENST00000615653 MS4A4AQ96JQ5 239 aa9.53□□□□□ -0.88
HMGB1P24-202ENST00000615653 CIZ1Q9ULV3 898 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P24-202ENST00000615653 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
HMGB1P24-202ENST00000615653 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
HMGB1P24-202ENST00000615653 RGS20O76081 388 aa9.48□□□□□ -0.89
HMGB1P24-202ENST00000615653 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
HMGB1P24-202ENST00000615653 NUDT7P0C024 238 aa9.47□□□□□ -0.89
HMGB1P24-202ENST00000615653 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
HMGB1P24-202ENST00000615653 PHF8Q9UPP1 1060 aa9.44□□□□□ -0.9
HMGB1P24-202ENST00000615653 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
HMGB1P24-202ENST00000615653 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P24-202ENST00000615653 TK2O00142 265 aa9.42□□□□□ -0.9
HMGB1P24-202ENST00000615653 HRO43593 1189 aa9.42□□□□□ -0.9
HMGB1P24-202ENST00000615653 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
HMGB1P24-202ENST00000615653 KIF3CO14782 793 aa9.4□□□□□ -0.9
HMGB1P24-202ENST00000615653 SLC34A2O95436 690 aa9.4□□□□□ -0.9
HMGB1P24-202ENST00000615653 IFFO2Q5TF58 517 aa9.39□□□□□ -0.91
HMGB1P24-202ENST00000615653 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
HMGB1P24-202ENST00000615653 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P24-202ENST00000615653 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
HMGB1P24-202ENST00000615653 PSDA5PKW4 1024 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P24-202ENST00000615653 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
HMGB1P24-202ENST00000615653 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
HMGB1P24-202ENST00000615653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P24-202ENST00000615653 NLRP6P59044 892 aa9.32□□□□□ -0.92
HMGB1P24-202ENST00000615653 ZFP91Q96JP5 570 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P24-202ENST00000615653 FBXO22Q8NEZ5 403 aa9.31□□□□□ -0.92
HMGB1P24-202ENST00000615653 PSEN2P49810 448 aa9.3□□□□□ -0.92
HMGB1P24-202ENST00000615653 A0A0G2JS52 829 aa9.29□□□□□ -0.92
HMGB1P24-202ENST00000615653 KDM4FA0A1W2PPD8 638 aa9.29□□□□□ -0.92
HMGB1P24-202ENST00000615653 RIOK3O14730 519 aaKnown RBP9.29□□□□□ -0.92
HMGB1P24-202ENST00000615653 VGFO15240 615 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P24-202ENST00000615653 STAC3Q96MF2 364 aa9.27□□□□□ -0.93
HMGB1P24-202ENST00000615653 RNF25Q96BH1 459 aaPredicted RBP9.26□□□□□ -0.93
HMGB1P24-202ENST00000615653 PTPN5P54829 565 aa9.25□□□□□ -0.93
HMGB1P24-202ENST00000615653 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
HMGB1P24-202ENST00000615653 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
HMGB1P24-202ENST00000615653 MFRPQ9BY79 579 aa9.19□□□□□ -0.94
HMGB1P24-202ENST00000615653 PTCD2Q8WV60 388 aaKnown RBP9.18□□□□□ -0.94
HMGB1P24-202ENST00000615653 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
HMGB1P24-202ENST00000615653 THSD4Q6ZMP0 1018 aa9.17□□□□□ -0.94
HMGB1P24-202ENST00000615653 Q6ZNB5 142 aa9.17□□□□□ -0.94
HMGB1P24-202ENST00000615653 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
HMGB1P24-202ENST00000615653 KCNK17Q96T54 332 aa9.13□□□□□ -0.95
HMGB1P24-202ENST00000615653 SLC4A5Q9BY07 1137 aa9.13□□□□□ -0.95
HMGB1P24-202ENST00000615653 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
HMGB1P24-202ENST00000615653 BHMG1C9JSJ3 638 aaPredicted RBP9.11□□□□□ -0.95
HMGB1P24-202ENST00000615653 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
HMGB1P24-202ENST00000615653 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
HMGB1P24-202ENST00000615653 WNT2BQ93097 391 aa9.06□□□□□ -0.96
HMGB1P24-202ENST00000615653 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
HMGB1P24-202ENST00000615653 ITGBL1O95965 494 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P24-202ENST00000615653 LCE2BO14633 110 aa9.04□□□□□ -0.96
HMGB1P24-202ENST00000615653 TBC1D12O60347 775 aa9.04□□□□□ -0.96
HMGB1P24-202ENST00000615653 FOXK1P85037 733 aa9.03□□□□□ -0.96
HMGB1P24-202ENST00000615653 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
HMGB1P24-202ENST00000615653 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
HMGB1P24-202ENST00000615653 PLPP6Q8IY26 295 aa9.02□□□□□ -0.97
HMGB1P24-202ENST00000615653 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
HMGB1P24-202ENST00000615653 TRAF7Q6Q0C0 670 aa9□□□□□ -0.97
HMGB1P24-202ENST00000615653 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
HMGB1P24-202ENST00000615653 STK25O00506 426 aa8.97□□□□□ -0.97
HMGB1P24-202ENST00000615653 PPP1R37O75864 691 aa8.97□□□□□ -0.97
HMGB1P24-202ENST00000615653 ZNF454Q8N9F8 522 aa8.96□□□□□ -0.98
HMGB1P24-202ENST00000615653 PTPREP23469 700 aa8.95□□□□□ -0.98
HMGB1P24-202ENST00000615653 NBPF3Q9H094 633 aa8.95□□□□□ -0.98
HMGB1P24-202ENST00000615653 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P24-202ENST00000615653 DSG2Q14126 1118 aa8.93□□□□□ -0.98
HMGB1P24-202ENST00000615653 GFRA3O60609 400 aa8.92□□□□□ -0.98
HMGB1P24-202ENST00000615653 FOSBP53539 338 aa8.92□□□□□ -0.98
HMGB1P24-202ENST00000615653 OXER1Q8TDS5 423 aa8.92□□□□□ -0.98
HMGB1P24-202ENST00000615653 KCNC4Q03721 635 aa8.89□□□□□ -0.99
HMGB1P24-202ENST00000615653 NYAP1Q6ZVC0 841 aa8.89□□□□□ -0.99
HMGB1P24-202ENST00000615653 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
HMGB1P24-202ENST00000615653 SOWAHBA6NEL2 793 aa8.84□□□□□ -0.99
HMGB1P24-202ENST00000615653 NRG2O14511 850 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P24-202ENST00000615653 BCAMP50895 628 aa8.84□□□□□ -0.99
HMGB1P24-202ENST00000615653 ANO8Q9HCE9 1232 aaPredicted RBP8.84□□□□□ -0.99
HMGB1P24-202ENST00000615653 RABGEF1Q9UJ41 708 aa8.84□□□□□ -0.99
HMGB1P24-202ENST00000615653 ZNF787Q6DD87 383 aa8.83□□□□□ -1
HMGB1P24-202ENST00000615653 ZDHHC16Q969W1 377 aa8.83□□□□□ -1
HMGB1P24-202ENST00000615653 JPH4Q96JJ6 628 aa8.83□□□□□ -1
HMGB1P24-202ENST00000615653 ADAM33Q9BZ11 813 aa8.83□□□□□ -1
HMGB1P24-202ENST00000615653 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
HMGB1P24-202ENST00000615653 LAPTM4BQ86VI4 370 aa8.81□□□□□ -1
HMGB1P24-202ENST00000615653 ZNF775Q96BV0 537 aaPredicted RBP8.81□□□□□ -1
HMGB1P24-202ENST00000615653 WBP1LQ9NX94 342 aa8.8□□□□□ -1
HMGB1P24-202ENST00000615653 PPP1R3GB7ZBB8 358 aa8.77□□□□□ -1.01
HMGB1P24-202ENST00000615653 PROX2Q3B8N5 592 aa8.76□□□□□ -1.01
HMGB1P24-202ENST00000615653 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
HMGB1P24-202ENST00000615653 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
HMGB1P24-202ENST00000615653 EVI5O60447 810 aa8.72□□□□□ -1.01
HMGB1P24-202ENST00000615653 ECM2O94769 699 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P24-202ENST00000615653 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P24-202ENST00000615653 COL9A1P20849 921 aa8.71□□□□□ -1.02
HMGB1P24-202ENST00000615653 ONECUT3O60422 494 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms