RNA–Protein interactions for RNA: ENST00000613146.4

ACACA-228, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 3,974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-228ENST00000613146 RAPGEF6Q8TEU7 1601 aa10.88□□□□□ -0.67
ACACA-228ENST00000613146 ATP10BO94823 1461 aa10.88□□□□□ -0.67
ACACA-228ENST00000613146 CHD1O14646 1710 aa10.87□□□□□ -0.67
ACACA-228ENST00000613146 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
ACACA-228ENST00000613146 KIF14Q15058 1648 aa10.86□□□□□ -0.67
ACACA-228ENST00000613146 RGL3Q3MIN7 710 aa10.86□□□□□ -0.67
ACACA-228ENST00000613146 KDM6BO15054 1643 aa10.86□□□□□ -0.67
ACACA-228ENST00000613146 TROQ12816 1431 aaPredicted RBP10.86□□□□□ -0.67
ACACA-228ENST00000613146 PKD2Q13563 968 aa10.85□□□□□ -0.67
ACACA-228ENST00000613146 L3MBTL2Q969R5 705 aa10.85□□□□□ -0.67
ACACA-228ENST00000613146 CLSPNQ9HAW4 1339 aa10.85□□□□□ -0.67
ACACA-228ENST00000613146 SENP3-EIF4A1A0A087X0R7 540 aa10.84□□□□□ -0.67
ACACA-228ENST00000613146 ABCC5O15440 1437 aa10.84□□□□□ -0.67
ACACA-228ENST00000613146 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
ACACA-228ENST00000613146 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
ACACA-228ENST00000613146 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
ACACA-228ENST00000613146 AFAP1Q8N556 730 aa10.83□□□□□ -0.68
ACACA-228ENST00000613146 DAPK1P53355 1430 aa10.83□□□□□ -0.68
ACACA-228ENST00000613146 OSCARQ8IYS5 282 aa10.82□□□□□ -0.68
ACACA-228ENST00000613146 GPATCH8Q9UKJ3 1502 aaKnown RBP10.82□□□□□ -0.68
ACACA-228ENST00000613146 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
ACACA-228ENST00000613146 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
ACACA-228ENST00000613146 NUP155O75694 1391 aa10.8□□□□□ -0.68
ACACA-228ENST00000613146 CAMSAP2Q08AD1 1489 aa10.79□□□□□ -0.68
ACACA-228ENST00000613146 ACIN1Q9UKV3 1341 aaKnown RBP10.78□□□□□ -0.68
ACACA-228ENST00000613146 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
ACACA-228ENST00000613146 CENPBP07199 599 aaPredicted RBP10.78□□□□□ -0.68
ACACA-228ENST00000613146 NBPF8Q3BBV2 869 aa10.77□□□□□ -0.68
ACACA-228ENST00000613146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.68
ACACA-228ENST00000613146 MIA2Q96PC5 1412 aa10.77□□□□□ -0.69
ACACA-228ENST00000613146 HSPA5P11021 654 aaKnown RBP10.76□□□□□ -0.69
ACACA-228ENST00000613146 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
ACACA-228ENST00000613146 ANKRD30AQ9BXX3 1397 aa10.75□□□□□ -0.69
ACACA-228ENST00000613146 DCAF11Q8TEB1 546 aa10.74□□□□□ -0.69
ACACA-228ENST00000613146 NCOA1Q15788 1441 aa10.74□□□□□ -0.69
ACACA-228ENST00000613146 ARHGAP5Q13017 1502 aa10.73□□□□□ -0.69
ACACA-228ENST00000613146 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
ACACA-228ENST00000613146 ANKRD50Q9ULJ7 1429 aa10.73□□□□□ -0.69
ACACA-228ENST00000613146 ABCA8O94911 1581 aa10.73□□□□□ -0.69
ACACA-228ENST00000613146 EFCAB2Q5VUJ9 269 aa10.73□□□□□ -0.69
ACACA-228ENST00000613146 TCOF1Q13428 1488 aaKnown RBP10.72□□□□□ -0.69
ACACA-228ENST00000613146 C9orf84Q5VXU9 1444 aa10.72□□□□□ -0.69
ACACA-228ENST00000613146 C11orf95C9JLR9 678 aaPredicted RBP10.72□□□□□ -0.69
ACACA-228ENST00000613146 DENND4BO75064 1496 aaPredicted RBP10.71□□□□□ -0.69
ACACA-228ENST00000613146 AKNAQ7Z591 1439 aa10.71□□□□□ -0.7
ACACA-228ENST00000613146 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
ACACA-228ENST00000613146 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.71e-9■□□□□ 9.6
ACACA-228ENST00000613146 KIF3BO15066 747 aa10.69□□□□□ -0.7
ACACA-228ENST00000613146 GGT6Q6P531 493 aa10.68□□□□□ -0.7
ACACA-228ENST00000613146 ANP32CO43423 234 aa10.68□□□□□ -0.7
ACACA-228ENST00000613146 RAPGEF3O95398 923 aa10.68□□□□□ -0.7
ACACA-228ENST00000613146 ABCC10Q5T3U5 1492 aa10.68□□□□□ -0.7
ACACA-228ENST00000613146 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
ACACA-228ENST00000613146 PLPPR3Q6T4P5 718 aa10.67□□□□□ -0.7
ACACA-228ENST00000613146 ANKRD30BQ9BXX2 1392 aa10.67□□□□□ -0.7
ACACA-228ENST00000613146 SYCP2Q9BX26 1530 aa10.67□□□□□ -0.7
ACACA-228ENST00000613146 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
ACACA-228ENST00000613146 CDC42BPAQ5VT25 1732 aa10.66□□□□□ -0.7
ACACA-228ENST00000613146 TTC37Q6PGP7 1564 aa10.66□□□□□ -0.7
ACACA-228ENST00000613146 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
ACACA-228ENST00000613146 TRAPPC8Q9Y2L5 1435 aa10.65□□□□□ -0.7
ACACA-228ENST00000613146 WASHC2AQ641Q2 1341 aa10.65□□□□□ -0.7
ACACA-228ENST00000613146 CARD11Q9BXL7 1154 aa10.65□□□□□ -0.71
ACACA-228ENST00000613146 PLEKHH2Q8IVE3 1493 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.64□□□□□ -0.71
ACACA-228ENST00000613146 ROCK1Q13464 1354 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 BCANQ96GW7 911 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 ABCC2Q92887 1545 aa10.64□□□□□ -0.71
ACACA-228ENST00000613146 FAM9BQ8IZU0 186 aa10.63□□□□□ -0.71
ACACA-228ENST00000613146 PZPP20742 1482 aa10.62□□□□□ -0.71
ACACA-228ENST00000613146 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
ACACA-228ENST00000613146 ARHGEF12Q9NZN5 1544 aa10.62□□□□□ -0.71
ACACA-228ENST00000613146 MLECQ14165 292 aa10.62□□□□□ -0.71
ACACA-228ENST00000613146 MBD5Q9P267 1494 aa10.62□□□□□ -0.71
ACACA-228ENST00000613146 SAMD9LQ8IVG5 1584 aa10.61□□□□□ -0.71
ACACA-228ENST00000613146 ASXL2Q76L83 1435 aa10.6□□□□□ -0.71
ACACA-228ENST00000613146 ST20-MTHFSA0A0A6YYL1 179 aa10.6□□□□□ -0.71
ACACA-228ENST00000613146 CDC42BPBQ9Y5S2 1711 aa10.6□□□□□ -0.71
ACACA-228ENST00000613146 MYT1Q01538 1121 aa10.6□□□□□ -0.71
ACACA-228ENST00000613146 CCDC141Q6ZP82 1450 aa10.6□□□□□ -0.71
ACACA-228ENST00000613146 ITSN2Q9NZM3 1697 aa10.6□□□□□ -0.71
ACACA-228ENST00000613146 ZCCHC11Q5TAX3 1644 aaKnown RBP10.59□□□□□ -0.71
ACACA-228ENST00000613146 CLASP1Q7Z460 1538 aa10.59□□□□□ -0.71
ACACA-228ENST00000613146 KIAA1107Q9UPP5 1409 aa10.59□□□□□ -0.71
ACACA-228ENST00000613146 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
ACACA-228ENST00000613146 GCC2Q8IWJ2 1684 aa10.58□□□□□ -0.72
ACACA-228ENST00000613146 PLCH2O75038 1416 aa10.58□□□□□ -0.72
ACACA-228ENST00000613146 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
ACACA-228ENST00000613146 CFAP65Q6ZU64 1925 aaKnown RBP10.57□□□□□ -0.72
ACACA-228ENST00000613146 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
ACACA-228ENST00000613146 SHROOM2Q13796 1616 aa10.57□□□□□ -0.72
ACACA-228ENST00000613146 HNRNPUQ00839 825 aaKnown RBP eCLIP10.56□□□□□ -0.72
ACACA-228ENST00000613146 KIF7Q2M1P5 1343 aa10.56□□□□□ -0.72
ACACA-228ENST00000613146 FANCAO15360 1455 aa10.56□□□□□ -0.72
ACACA-228ENST00000613146 RPRD2Q5VT52 1461 aaKnown RBP10.56□□□□□ -0.72
ACACA-228ENST00000613146 IRX6P78412 446 aaPredicted RBP10.55□□□□□ -0.72
ACACA-228ENST00000613146 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms