RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 VPS8Q8N3P4 1428 aa8.93□□□□□ -0.98
PBX1-221ENST00000612123 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
PBX1-221ENST00000612123 WDR43Q15061 677 aaKnown RBP eCLIP8.93□□□□□ -0.98
PBX1-221ENST00000612123 RAD54L2Q9Y4B4 1467 aa8.93□□□□□ -0.98
PBX1-221ENST00000612123 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
PBX1-221ENST00000612123 WDR97A6NE52 1622 aa8.92□□□□□ -0.98
PBX1-221ENST00000612123 RSPH4AQ5TD94 716 aa8.92□□□□□ -0.98
PBX1-221ENST00000612123 THOC2Q8NI27 1593 aaKnown RBP8.92□□□□□ -0.98
PBX1-221ENST00000612123 MAGI1Q96QZ7 1491 aaPredicted RBP8.91□□□□□ -0.98
PBX1-221ENST00000612123 SNAPC4Q5SXM2 1469 aa8.91□□□□□ -0.98
PBX1-221ENST00000612123 NOP58Q9Y2X3 529 aaKnown RBP8.91□□□□□ -0.98
PBX1-221ENST00000612123 EFCAB2Q5VUJ9 269 aa8.91□□□□□ -0.98
PBX1-221ENST00000612123 PAXIP1Q6ZW49 1069 aaPredicted RBP8.91□□□□□ -0.98
PBX1-221ENST00000612123 POLA1P09884 1462 aaPredicted RBP8.91□□□□□ -0.98
PBX1-221ENST00000612123 ZBTB7CA1YPR0 619 aa8.91□□□□□ -0.98
PBX1-221ENST00000612123 SENP3Q9H4L4 574 aaPredicted RBP8.89□□□□□ -0.99
PBX1-221ENST00000612123 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
PBX1-221ENST00000612123 PDE4CQ08493 712 aa8.89□□□□□ -0.99
PBX1-221ENST00000612123 HNRNPUQ00839 825 aaKnown RBP eCLIP8.88□□□□□ -0.99
PBX1-221ENST00000612123 FOXD1Q16676 465 aa8.88□□□□□ -0.99
PBX1-221ENST00000612123 PLCD3Q8N3E9 789 aa8.88□□□□□ -0.99
PBX1-221ENST00000612123 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
PBX1-221ENST00000612123 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
PBX1-221ENST00000612123 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
PBX1-221ENST00000612123 ARHGAP35Q9NRY4 1499 aa8.87□□□□□ -0.99
PBX1-221ENST00000612123 JPH4Q96JJ6 628 aa8.86□□□□□ -0.99
PBX1-221ENST00000612123 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
PBX1-221ENST00000612123 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
PBX1-221ENST00000612123 RGS3P49796 1198 aa8.85□□□□□ -0.99
PBX1-221ENST00000612123 FAM9BQ8IZU0 186 aa8.85□□□□□ -0.99
PBX1-221ENST00000612123 CARD11Q9BXL7 1154 aa8.85□□□□□ -0.99
PBX1-221ENST00000612123 KNSTRNQ9Y448 316 aa8.84□□□□□ -0.99
PBX1-221ENST00000612123 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
PBX1-221ENST00000612123 NAP1L5Q96NT1 182 aaPredicted RBP8.84□□□□□ -0.99
PBX1-221ENST00000612123 CHMP4BQ9H444 224 aaKnown RBP8.84□□□□□ -0.99
PBX1-221ENST00000612123 CUX1P39880 1505 aa8.83□□□□□ -1
PBX1-221ENST00000612123 UPF2Q9HAU5 1272 aaKnown RBP8.83□□□□□ -1
PBX1-221ENST00000612123 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
PBX1-221ENST00000612123 ANKRD30AQ9BXX3 1397 aa8.82□□□□□ -1
PBX1-221ENST00000612123 CUL7Q14999 1698 aa8.82□□□□□ -1
PBX1-221ENST00000612123 ANP32AP39687 249 aaKnown RBP8.82□□□□□ -1
PBX1-221ENST00000612123 POGKQ9P215 609 aa8.82□□□□□ -1
PBX1-221ENST00000612123 CCDC18Q5T9S5 1454 aa8.82□□□□□ -1
PBX1-221ENST00000612123 SETD5Q9C0A6 1442 aa8.81□□□□□ -1
PBX1-221ENST00000612123 NUDCQ9Y266 331 aa8.81□□□□□ -1
PBX1-221ENST00000612123 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
PBX1-221ENST00000612123 VGLL3A8MV65 326 aa8.8□□□□□ -1
PBX1-221ENST00000612123 PTPRGP23470 1445 aa8.8□□□□□ -1
PBX1-221ENST00000612123 EIF4G3O43432 1585 aaKnown RBP8.8□□□□□ -1
PBX1-221ENST00000612123 PNNQ9H307 717 aaKnown RBP8.79□□□□□ -1
PBX1-221ENST00000612123 KLHL34Q8N239 644 aa8.79□□□□□ -1
PBX1-221ENST00000612123 TMF1P82094 1093 aa8.78□□□□□ -1
PBX1-221ENST00000612123 PRG4Q92954 1404 aaPredicted RBP8.78□□□□□ -1
PBX1-221ENST00000612123 MYH16Q9H6N6 1097 aa8.78□□□□□ -1
PBX1-221ENST00000612123 PRDM10Q9NQV6 1147 aa8.77□□□□□ -1
PBX1-221ENST00000612123 DHX37Q8IY37 1157 aaKnown RBP8.77□□□□□ -1.01
PBX1-221ENST00000612123 PRXQ9BXM0 1461 aa8.77□□□□□ -1.01
PBX1-221ENST00000612123 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
PBX1-221ENST00000612123 A0A0G2JS52 829 aa8.77□□□□□ -1.01
PBX1-221ENST00000612123 NCBP3Q53F19 620 aaKnown RBP8.77□□□□□ -1.01
PBX1-221ENST00000612123 FAM69CQ0P6D2 419 aa8.76□□□□□ -1.01
PBX1-221ENST00000612123 TPRNQ4KMQ1 711 aa8.76□□□□□ -1.01
PBX1-221ENST00000612123 GRIN2AQ12879 1464 aa8.76□□□□□ -1.01
PBX1-221ENST00000612123 DCAF11Q8TEB1 546 aa8.76□□□□□ -1.01
PBX1-221ENST00000612123 FRAT1Q92837 279 aaPredicted RBP8.75□□□□□ -1.01
PBX1-221ENST00000612123 ZHX1Q9UKY1 873 aaPredicted RBP8.75□□□□□ -1.01
PBX1-221ENST00000612123 SPAG9O60271 1321 aaKnown RBP8.75□□□□□ -1.01
PBX1-221ENST00000612123 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
PBX1-221ENST00000612123 GGT6Q6P531 493 aa8.74□□□□□ -1.01
PBX1-221ENST00000612123 AAMPQ13685 434 aa8.74□□□□□ -1.01
PBX1-221ENST00000612123 PKD2Q13563 968 aa8.74□□□□□ -1.01
PBX1-221ENST00000612123 FGD1P98174 961 aa8.74□□□□□ -1.01
PBX1-221ENST00000612123 MAPK8IP3Q9UPT6 1336 aa8.73□□□□□ -1.01
PBX1-221ENST00000612123 PDIA4P13667 645 aaKnown RBP8.73□□□□□ -1.01
PBX1-221ENST00000612123 NUP155O75694 1391 aa8.73□□□□□ -1.01
PBX1-221ENST00000612123 MS4A1P11836 297 aa8.72□□□□□ -1.01
PBX1-221ENST00000612123 FHOD3Q2V2M9 1422 aa8.72□□□□□ -1.01
PBX1-221ENST00000612123 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
PBX1-221ENST00000612123 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
PBX1-221ENST00000612123 IGF1RP08069 1367 aa8.71□□□□□ -1.01
PBX1-221ENST00000612123 FANCIQ9NVI1 1328 aa8.71□□□□□ -1.02
PBX1-221ENST00000612123 MPHOSPH9Q99550 1183 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 TAOK2Q9UL54 1235 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 HSP90AA2PQ14568 343 aaPredicted RBP8.7□□□□□ -1.02
PBX1-221ENST00000612123 PBRM1Q86U86 1689 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 KIAA0586Q9BVV6 1533 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 KIF3BO15066 747 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 MLECQ14165 292 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 CHMP4AQ9BY43 222 aa8.7□□□□□ -1.02
PBX1-221ENST00000612123 GZF1Q9H116 711 aaPredicted RBP8.7□□□□□ -1.02
PBX1-221ENST00000612123 EIF3AQ14152 1382 aaKnown RBP8.69□□□□□ -1.02
PBX1-221ENST00000612123 ERICH6BQ5W0A0 696 aa8.69□□□□□ -1.02
PBX1-221ENST00000612123 RRAGDQ9NQL2 400 aaPredicted RBP8.68□□□□□ -1.02
PBX1-221ENST00000612123 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
PBX1-221ENST00000612123 EID1Q9Y6B2 187 aa8.68□□□□□ -1.02
PBX1-221ENST00000612123 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
PBX1-221ENST00000612123 STAC3Q96MF2 364 aa8.68□□□□□ -1.02
PBX1-221ENST00000612123 E9PSI1 815 aa8.68□□□□□ -1.02
PBX1-221ENST00000612123 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
PBX1-221ENST00000612123 ZBTB9Q96C00 473 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms