RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PDS5BQ9NTI5 1447 aa9.11□□□□□ -0.95
SYNPO2-206ENST00000610556 NCOA2Q15596 1464 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 ABCA5Q8WWZ7 1642 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 ERICH6BQ5W0A0 696 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 KIF7Q2M1P5 1343 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 ST20-MTHFSA0A0A6YYL1 179 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 DEKP35659 375 aaKnown RBP9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 NBPF8Q3BBV2 869 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
SYNPO2-206ENST00000610556 CCDC7Q96M83 1385 aa9.08□□□□□ -0.96
SYNPO2-206ENST00000610556 GAPVD1Q14C86 1478 aa9.08□□□□□ -0.96
SYNPO2-206ENST00000610556 HNRNPMP52272 730 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYNPO2-206ENST00000610556 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
SYNPO2-206ENST00000610556 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
SYNPO2-206ENST00000610556 KNSTRNQ9Y448 316 aa9.07□□□□□ -0.96
SYNPO2-206ENST00000610556 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
SYNPO2-206ENST00000610556 FYCO1Q9BQS8 1478 aa9.07□□□□□ -0.96
SYNPO2-206ENST00000610556 RCAN3Q9UKA8 241 aa9.07□□□□□ -0.96
SYNPO2-206ENST00000610556 HFM1A2PYH4 1435 aa9.06□□□□□ -0.96
SYNPO2-206ENST00000610556 RGS3P49796 1198 aa9.06□□□□□ -0.96
SYNPO2-206ENST00000610556 POLA1P09884 1462 aaPredicted RBP9.06□□□□□ -0.96
SYNPO2-206ENST00000610556 NAIPQ13075 1403 aa9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 NEUROD2Q15784 382 aa9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 USP47Q96K76 1375 aa9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 NEFMP07197 916 aa9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 ROCK2O75116 1388 aaKnown RBP9.05□□□□□ -0.96
SYNPO2-206ENST00000610556 AQRO60306 1485 aaKnown RBP eCLIP9.04□□□□□ -0.96
SYNPO2-206ENST00000610556 ARXQ96QS3 562 aa9.04□□□□□ -0.96
SYNPO2-206ENST00000610556 PCF11O94913 1555 aaKnown RBP9.04□□□□□ -0.96
SYNPO2-206ENST00000610556 ANKRD30AQ9BXX3 1397 aa9.04□□□□□ -0.96
SYNPO2-206ENST00000610556 CNTLNQ9NXG0 1405 aa9.04□□□□□ -0.96
SYNPO2-206ENST00000610556 FANCIQ9NVI1 1328 aa9.04□□□□□ -0.96
SYNPO2-206ENST00000610556 PLIN1O60240 522 aa9.03□□□□□ -0.96
SYNPO2-206ENST00000610556 TNNT2P45379 298 aaPredicted RBP9.03□□□□□ -0.96
SYNPO2-206ENST00000610556 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
SYNPO2-206ENST00000610556 EXOC6Q8TAG9 804 aa9.03□□□□□ -0.96
SYNPO2-206ENST00000610556 JPH4Q96JJ6 628 aa9.03□□□□□ -0.96
SYNPO2-206ENST00000610556 MSH5O43196 834 aa9.02□□□□□ -0.97
SYNPO2-206ENST00000610556 TMF1P82094 1093 aa9.02□□□□□ -0.97
SYNPO2-206ENST00000610556 PTPRKQ15262 1439 aa9.02□□□□□ -0.97
SYNPO2-206ENST00000610556 KTN1Q86UP2 1357 aaKnown RBP9.02□□□□□ -0.97
SYNPO2-206ENST00000610556 RALBP1Q15311 655 aa9.01□□□□□ -0.97
SYNPO2-206ENST00000610556 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
SYNPO2-206ENST00000610556 NLRP13Q86W25 1043 aa9□□□□□ -0.97
SYNPO2-206ENST00000610556 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
SYNPO2-206ENST00000610556 EIF5BO60841 1220 aaKnown RBP9□□□□□ -0.97
SYNPO2-206ENST00000610556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.99□□□□□ -0.97
SYNPO2-206ENST00000610556 FRAT1Q92837 279 aaPredicted RBP8.99□□□□□ -0.97
SYNPO2-206ENST00000610556 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
SYNPO2-206ENST00000610556 MAP3K1Q13233 1512 aa8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 ABCA10Q8WWZ4 1543 aa8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 MYBBP1AQ9BQG0 1328 aaKnown RBP8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 PANK3Q9H999 370 aa8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 EFCAB5A4FU69 1503 aa8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 DDRGK1Q96HY6 314 aa8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 KIF15Q9NS87 1388 aa8.98□□□□□ -0.97
SYNPO2-206ENST00000610556 RRP1P56182 461 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-206ENST00000610556 UPF2Q9HAU5 1272 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-206ENST00000610556 CARMIL2Q6F5E8 1435 aa8.97□□□□□ -0.97
SYNPO2-206ENST00000610556 PAK3O75914 559 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-206ENST00000610556 TCERG1O14776 1098 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-206ENST00000610556 CCDC146Q8IYE0 955 aa8.97□□□□□ -0.97
SYNPO2-206ENST00000610556 CDCA8Q53HL2 280 aa8.96□□□□□ -0.97
SYNPO2-206ENST00000610556 PPM1GO15355 546 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-206ENST00000610556 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.98
SYNPO2-206ENST00000610556 CDK13Q14004 1512 aaKnown RBP8.96□□□□□ -0.98
SYNPO2-206ENST00000610556 PDE4AP27815 886 aa8.95□□□□□ -0.98
SYNPO2-206ENST00000610556 SLC4A3P48751 1232 aa8.95□□□□□ -0.98
SYNPO2-206ENST00000610556 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
SYNPO2-206ENST00000610556 PNISRQ8TF01 805 aaKnown RBP8.94□□□□□ -0.98
SYNPO2-206ENST00000610556 CRBNQ96SW2 442 aa8.94□□□□□ -0.98
SYNPO2-206ENST00000610556 NBPF1Q3BBV0 1214 aa8.94□□□□□ -0.98
SYNPO2-206ENST00000610556 PRG4Q92954 1404 aaPredicted RBP8.94□□□□□ -0.98
SYNPO2-206ENST00000610556 ANKRD50Q9ULJ7 1429 aa8.93□□□□□ -0.98
SYNPO2-206ENST00000610556 EHBP1L1Q8N3D4 1523 aa8.93□□□□□ -0.98
SYNPO2-206ENST00000610556 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
SYNPO2-206ENST00000610556 EIF4G3O43432 1585 aaKnown RBP8.92□□□□□ -0.98
SYNPO2-206ENST00000610556 PDE3BQ13370 1112 aa8.92□□□□□ -0.98
SYNPO2-206ENST00000610556 CCDC144AA2RUR9 1427 aa8.92□□□□□ -0.98
SYNPO2-206ENST00000610556 MIA2Q96PC5 1412 aa8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 EPRSP07814 1512 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 SAFB2Q14151 953 aaKnown RBP eCLIP8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 STAG3Q9UJ98 1225 aa8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 DAPK1P53355 1430 aa8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 NPM1P06748 294 aaKnown RBP eCLIP8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 HSP90AA1P07900 732 aaKnown RBP8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 PTPN23Q9H3S7 1636 aa8.91□□□□□ -0.98
SYNPO2-206ENST00000610556 CUL7Q14999 1698 aa8.9□□□□□ -0.98
SYNPO2-206ENST00000610556 CTTNBP2Q8WZ74 1663 aa8.89□□□□□ -0.99
SYNPO2-206ENST00000610556 SKAP1Q86WV1 359 aa8.89□□□□□ -0.99
SYNPO2-206ENST00000610556 SUPT6HQ7KZ85 1726 aaKnown RBP8.89□□□□□ -0.99
SYNPO2-206ENST00000610556 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
SYNPO2-206ENST00000610556 LRRIQ1Q96JM4 1722 aa8.89□□□□□ -0.99
SYNPO2-206ENST00000610556 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 EFCAB2Q5VUJ9 269 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 MORC1Q86VD1 984 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms