RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
CTCFL-219ENST00000608720 ANKRD30BQ9BXX2 1392 aa20.28■□□□□ 0.84
CTCFL-219ENST00000608720 ARID3CA6NKF2 412 aa20.26■□□□□ 0.83
CTCFL-219ENST00000608720 ABCC5O15440 1437 aa20.25■□□□□ 0.83
CTCFL-219ENST00000608720 NCOA1Q15788 1441 aa20.25■□□□□ 0.83
CTCFL-219ENST00000608720 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
CTCFL-219ENST00000608720 KIAA0586Q9BVV6 1533 aa20.25■□□□□ 0.83
CTCFL-219ENST00000608720 FOXD1Q16676 465 aa20.25■□□□□ 0.83
CTCFL-219ENST00000608720 RPRD2Q5VT52 1461 aaKnown RBP20.24■□□□□ 0.83
CTCFL-219ENST00000608720 CCDC7Q96M83 1385 aa20.24■□□□□ 0.83
CTCFL-219ENST00000608720 DNMT1P26358 1616 aaKnown RBP20.21■□□□□ 0.83
CTCFL-219ENST00000608720 ERICH6BQ5W0A0 696 aa20.21■□□□□ 0.83
CTCFL-219ENST00000608720 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
CTCFL-219ENST00000608720 C11orf95C9JLR9 678 aaPredicted RBP20.2■□□□□ 0.82
CTCFL-219ENST00000608720 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
CTCFL-219ENST00000608720 FBLN2P98095 1184 aa20.19■□□□□ 0.82
CTCFL-219ENST00000608720 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
CTCFL-219ENST00000608720 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
CTCFL-219ENST00000608720 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
CTCFL-219ENST00000608720 NUP153P49790 1475 aaKnown RBP20.19■□□□□ 0.82
CTCFL-219ENST00000608720 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
CTCFL-219ENST00000608720 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
CTCFL-219ENST00000608720 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
CTCFL-219ENST00000608720 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
CTCFL-219ENST00000608720 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
CTCFL-219ENST00000608720 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.81
CTCFL-219ENST00000608720 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.81
CTCFL-219ENST00000608720 CCDC184Q52MB2 194 aa20.14■□□□□ 0.81
CTCFL-219ENST00000608720 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
CTCFL-219ENST00000608720 TROQ12816 1431 aaPredicted RBP20.12■□□□□ 0.81
CTCFL-219ENST00000608720 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
CTCFL-219ENST00000608720 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
CTCFL-219ENST00000608720 CFDP1Q9UEE9 299 aaPredicted RBP20.11■□□□□ 0.81
CTCFL-219ENST00000608720 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
CTCFL-219ENST00000608720 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
CTCFL-219ENST00000608720 PZPP20742 1482 aa20.08■□□□□ 0.81
CTCFL-219ENST00000608720 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.8
CTCFL-219ENST00000608720 IRX6P78412 446 aaPredicted RBP20.07■□□□□ 0.8
CTCFL-219ENST00000608720 PPP4R2Q9NY27 417 aa20.07■□□□□ 0.8
CTCFL-219ENST00000608720 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
CTCFL-219ENST00000608720 MSH5O43196 834 aa20.05■□□□□ 0.8
CTCFL-219ENST00000608720 KIAA1107Q9UPP5 1409 aa20.05■□□□□ 0.8
CTCFL-219ENST00000608720 ADGRL2O95490 1459 aa20.05■□□□□ 0.8
CTCFL-219ENST00000608720 GPATCH8Q9UKJ3 1502 aaKnown RBP20.05■□□□□ 0.8
CTCFL-219ENST00000608720 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.8
CTCFL-219ENST00000608720 MBD5Q9P267 1494 aa20.02■□□□□ 0.79
CTCFL-219ENST00000608720 ARID4BQ4LE39 1312 aaPredicted RBP20.01■□□□□ 0.79
CTCFL-219ENST00000608720 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
CTCFL-219ENST00000608720 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
CTCFL-219ENST00000608720 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
CTCFL-219ENST00000608720 PKD2Q13563 968 aa19.99■□□□□ 0.79
CTCFL-219ENST00000608720 ZNF777Q9ULD5 760 aaPredicted RBP19.99■□□□□ 0.79
CTCFL-219ENST00000608720 POLR1AO95602 1720 aaPredicted RBP19.99■□□□□ 0.79
CTCFL-219ENST00000608720 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
CTCFL-219ENST00000608720 ADGBQ8N7X0 1667 aa19.98■□□□□ 0.79
CTCFL-219ENST00000608720 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
CTCFL-219ENST00000608720 USP47Q96K76 1375 aa19.97■□□□□ 0.79
CTCFL-219ENST00000608720 ADCY10Q96PN6 1610 aa19.97■□□□□ 0.79
CTCFL-219ENST00000608720 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
CTCFL-219ENST00000608720 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
CTCFL-219ENST00000608720 ANKRD50Q9ULJ7 1429 aa19.95■□□□□ 0.78
CTCFL-219ENST00000608720 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
CTCFL-219ENST00000608720 JPH4Q96JJ6 628 aa19.93■□□□□ 0.78
CTCFL-219ENST00000608720 UHRF1BP1Q6BDS2 1440 aa19.93■□□□□ 0.78
CTCFL-219ENST00000608720 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
CTCFL-219ENST00000608720 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
CTCFL-219ENST00000608720 KIF14Q15058 1648 aa19.92■□□□□ 0.78
CTCFL-219ENST00000608720 CROCC2H7BZ55 1655 aa19.91■□□□□ 0.78
CTCFL-219ENST00000608720 ROCK2O75116 1388 aaKnown RBP19.91■□□□□ 0.78
CTCFL-219ENST00000608720 ZNF326Q5BKZ1 582 aaKnown RBP19.91■□□□□ 0.78
CTCFL-219ENST00000608720 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
CTCFL-219ENST00000608720 SHANK2Q9UPX8 1470 aa19.9■□□□□ 0.78
CTCFL-219ENST00000608720 ERICH6Q7L0X2 663 aa19.89■□□□□ 0.77
CTCFL-219ENST00000608720 NUP155O75694 1391 aa19.89■□□□□ 0.77
CTCFL-219ENST00000608720 NUP160Q12769 1436 aa19.89■□□□□ 0.77
CTCFL-219ENST00000608720 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
CTCFL-219ENST00000608720 CHD1O14646 1710 aa19.87■□□□□ 0.77
CTCFL-219ENST00000608720 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
CTCFL-219ENST00000608720 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
CTCFL-219ENST00000608720 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
CTCFL-219ENST00000608720 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
CTCFL-219ENST00000608720 KDM5CP41229 1560 aa19.86■□□□□ 0.77
CTCFL-219ENST00000608720 C9orf84Q5VXU9 1444 aa19.86■□□□□ 0.77
CTCFL-219ENST00000608720 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
CTCFL-219ENST00000608720 ABCC10Q5T3U5 1492 aa19.85■□□□□ 0.77
CTCFL-219ENST00000608720 BCORL1Q5H9F3 1711 aa19.85■□□□□ 0.77
CTCFL-219ENST00000608720 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
CTCFL-219ENST00000608720 ARHGEF12Q9NZN5 1544 aa19.85■□□□□ 0.77
CTCFL-219ENST00000608720 CARD11Q9BXL7 1154 aa19.84■□□□□ 0.77
CTCFL-219ENST00000608720 KDM5DQ9BY66 1539 aa19.83■□□□□ 0.76
CTCFL-219ENST00000608720 ATP10BO94823 1461 aa19.82■□□□□ 0.76
CTCFL-219ENST00000608720 ABCA8O94911 1581 aa19.82■□□□□ 0.76
CTCFL-219ENST00000608720 RNF123Q5XPI4 1314 aa19.81■□□□□ 0.76
CTCFL-219ENST00000608720 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
CTCFL-219ENST00000608720 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
CTCFL-219ENST00000608720 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
CTCFL-219ENST00000608720 KTN1Q86UP2 1357 aaKnown RBP19.79■□□□□ 0.76
CTCFL-219ENST00000608720 PTPRGP23470 1445 aa19.79■□□□□ 0.76
CTCFL-219ENST00000608720 CNGB1Q14028 1251 aaPredicted RBP19.78■□□□□ 0.76
CTCFL-219ENST00000608720 CDC42BPAQ5VT25 1732 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms