RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 C2orf72A6NCS6 295 aa12.86□□□□□ -0.35
CSNK1A1-211ENST00000606826 POTEMA6NI47 508 aa12.85□□□□□ -0.35
CSNK1A1-211ENST00000606826 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
CSNK1A1-211ENST00000606826 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CSNK1A1-211ENST00000606826 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
CSNK1A1-211ENST00000606826 DOK7Q18PE1 504 aa12.84□□□□□ -0.35
CSNK1A1-211ENST00000606826 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
CSNK1A1-211ENST00000606826 HOXB3P14651 431 aaPredicted RBP12.81□□□□□ -0.36
CSNK1A1-211ENST00000606826 KIF3CO14782 793 aa12.8□□□□□ -0.36
CSNK1A1-211ENST00000606826 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.37
CSNK1A1-211ENST00000606826 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
CSNK1A1-211ENST00000606826 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
CSNK1A1-211ENST00000606826 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
CSNK1A1-211ENST00000606826 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
CSNK1A1-211ENST00000606826 EMP3P54852 163 aa12.73□□□□□ -0.37
CSNK1A1-211ENST00000606826 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
CSNK1A1-211ENST00000606826 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
CSNK1A1-211ENST00000606826 PDE4AP27815 886 aa12.69□□□□□ -0.38
CSNK1A1-211ENST00000606826 FOXK1P85037 733 aa12.69□□□□□ -0.38
CSNK1A1-211ENST00000606826 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
CSNK1A1-211ENST00000606826 DSG2Q14126 1118 aa12.68□□□□□ -0.38
CSNK1A1-211ENST00000606826 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
CSNK1A1-211ENST00000606826 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
CSNK1A1-211ENST00000606826 FAM205CA6NFA0 338 aa12.65□□□□□ -0.38
CSNK1A1-211ENST00000606826 ARSIQ5FYB1 569 aa12.65□□□□□ -0.38
CSNK1A1-211ENST00000606826 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
CSNK1A1-211ENST00000606826 GPR153Q6NV75 609 aa12.64□□□□□ -0.39
CSNK1A1-211ENST00000606826 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
CSNK1A1-211ENST00000606826 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
CSNK1A1-211ENST00000606826 ERBB3P21860 1342 aa12.62□□□□□ -0.39
CSNK1A1-211ENST00000606826 SLC34A2O95436 690 aa12.61□□□□□ -0.39
CSNK1A1-211ENST00000606826 KHSRPQ92945 711 aaKnown RBP eCLIP12.61□□□□□ -0.395e-9■□□□□ 11.3
CSNK1A1-211ENST00000606826 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
CSNK1A1-211ENST00000606826 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
CSNK1A1-211ENST00000606826 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
CSNK1A1-211ENST00000606826 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
CSNK1A1-211ENST00000606826 PCDH10Q9P2E7 1040 aa12.58□□□□□ -0.4
CSNK1A1-211ENST00000606826 NUDT7P0C024 238 aa12.57□□□□□ -0.4
CSNK1A1-211ENST00000606826 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSNK1A1-211ENST00000606826 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
CSNK1A1-211ENST00000606826 TBC1D12O60347 775 aa12.54□□□□□ -0.4
CSNK1A1-211ENST00000606826 MFSD10Q14728 455 aa12.54□□□□□ -0.4
CSNK1A1-211ENST00000606826 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
CSNK1A1-211ENST00000606826 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
CSNK1A1-211ENST00000606826 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
CSNK1A1-211ENST00000606826 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
CSNK1A1-211ENST00000606826 OXER1Q8TDS5 423 aa12.48□□□□□ -0.41
CSNK1A1-211ENST00000606826 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
CSNK1A1-211ENST00000606826 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
CSNK1A1-211ENST00000606826 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
CSNK1A1-211ENST00000606826 WDR70Q9NW82 654 aa12.43□□□□□ -0.42
CSNK1A1-211ENST00000606826 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
CSNK1A1-211ENST00000606826 EMILIN3Q9NT22 766 aa12.42□□□□□ -0.42
CSNK1A1-211ENST00000606826 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
CSNK1A1-211ENST00000606826 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
CSNK1A1-211ENST00000606826 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
CSNK1A1-211ENST00000606826 KDM4FA0A1W2PPD8 638 aa12.38□□□□□ -0.43
CSNK1A1-211ENST00000606826 EVI5O60447 810 aa12.37□□□□□ -0.43
CSNK1A1-211ENST00000606826 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
CSNK1A1-211ENST00000606826 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
CSNK1A1-211ENST00000606826 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
CSNK1A1-211ENST00000606826 DPYSL4O14531 572 aa12.34□□□□□ -0.43
CSNK1A1-211ENST00000606826 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
CSNK1A1-211ENST00000606826 E2F4Q16254 413 aa12.33□□□□□ -0.44
CSNK1A1-211ENST00000606826 ZNF454Q8N9F8 522 aa12.32□□□□□ -0.44
CSNK1A1-211ENST00000606826 PBX2P40425 430 aa12.29□□□□□ -0.44
CSNK1A1-211ENST00000606826 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
CSNK1A1-211ENST00000606826 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
CSNK1A1-211ENST00000606826 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
CSNK1A1-211ENST00000606826 SPNS2Q8IVW8 549 aa12.26□□□□□ -0.45
CSNK1A1-211ENST00000606826 FOSBP53539 338 aa12.25□□□□□ -0.45
CSNK1A1-211ENST00000606826 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
CSNK1A1-211ENST00000606826 JPH4Q96JJ6 628 aa12.25□□□□□ -0.45
CSNK1A1-211ENST00000606826 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
CSNK1A1-211ENST00000606826 LSM11P83369 360 aaKnown RBP eCLIP12.24□□□□□ -0.45
CSNK1A1-211ENST00000606826 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
CSNK1A1-211ENST00000606826 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
CSNK1A1-211ENST00000606826 KCNK17Q96T54 332 aa12.21□□□□□ -0.45
CSNK1A1-211ENST00000606826 PSEN2P49810 448 aa12.2□□□□□ -0.46
CSNK1A1-211ENST00000606826 PDIA6Q15084 440 aa12.2□□□□□ -0.46
CSNK1A1-211ENST00000606826 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
CSNK1A1-211ENST00000606826 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
CSNK1A1-211ENST00000606826 PCDHGA10Q9Y5H3 936 aa12.18□□□□□ -0.46
CSNK1A1-211ENST00000606826 PHF14O94880 888 aa12.17□□□□□ -0.46
CSNK1A1-211ENST00000606826 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
CSNK1A1-211ENST00000606826 DDX12PQ92771 950 aa12.17□□□□□ -0.46
CSNK1A1-211ENST00000606826 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
CSNK1A1-211ENST00000606826 PTPREP23469 700 aa12.16□□□□□ -0.46
CSNK1A1-211ENST00000606826 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
CSNK1A1-211ENST00000606826 ADAM33Q9BZ11 813 aa12.16□□□□□ -0.46
CSNK1A1-211ENST00000606826 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
CSNK1A1-211ENST00000606826 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
CSNK1A1-211ENST00000606826 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
CSNK1A1-211ENST00000606826 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
CSNK1A1-211ENST00000606826 EPAS1Q99814 870 aa12.13□□□□□ -0.47
CSNK1A1-211ENST00000606826 NBR1Q14596 966 aa12.12□□□□□ -0.47
CSNK1A1-211ENST00000606826 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
CSNK1A1-211ENST00000606826 PTGER2P43116 358 aa12.11□□□□□ -0.47
CSNK1A1-211ENST00000606826 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
CSNK1A1-211ENST00000606826 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms