RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.67□□□□□ -0.86
RNU6-88P-201ENST00000606801 G3V3G9 751 aa9.66□□□□□ -0.86
RNU6-88P-201ENST00000606801 C3orf67Q6ZVT6 689 aa9.64□□□□□ -0.87
RNU6-88P-201ENST00000606801 MICALL2Q8IY33 904 aa9.64□□□□□ -0.87
RNU6-88P-201ENST00000606801 SLAIN1Q8ND83 568 aa9.64□□□□□ -0.87
RNU6-88P-201ENST00000606801 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
RNU6-88P-201ENST00000606801 NCKAP5LQ9HCH0 1330 aa9.51□□□□□ -0.89
RNU6-88P-201ENST00000606801 SNPHO15079 494 aa9.49□□□□□ -0.89
RNU6-88P-201ENST00000606801 KIF3CO14782 793 aa9.48□□□□□ -0.89
RNU6-88P-201ENST00000606801 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
RNU6-88P-201ENST00000606801 BCANQ96GW7 911 aa9.47□□□□□ -0.89
RNU6-88P-201ENST00000606801 CRISPLD2Q9H0B8 497 aa9.47□□□□□ -0.89
RNU6-88P-201ENST00000606801 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
RNU6-88P-201ENST00000606801 C2orf72A6NCS6 295 aa9.45□□□□□ -0.9
RNU6-88P-201ENST00000606801 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
RNU6-88P-201ENST00000606801 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
RNU6-88P-201ENST00000606801 ST18O60284 1047 aa9.42□□□□□ -0.9
RNU6-88P-201ENST00000606801 PDE4AP27815 886 aa9.42□□□□□ -0.9
RNU6-88P-201ENST00000606801 MFSD10Q14728 455 aa9.42□□□□□ -0.9
RNU6-88P-201ENST00000606801 KCNV2Q8TDN2 545 aa9.42□□□□□ -0.9
RNU6-88P-201ENST00000606801 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
RNU6-88P-201ENST00000606801 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
RNU6-88P-201ENST00000606801 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
RNU6-88P-201ENST00000606801 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
RNU6-88P-201ENST00000606801 FOXK1P85037 733 aa9.37□□□□□ -0.91
RNU6-88P-201ENST00000606801 DSG2Q14126 1118 aa9.35□□□□□ -0.91
RNU6-88P-201ENST00000606801 E2F4Q16254 413 aa9.35□□□□□ -0.91
RNU6-88P-201ENST00000606801 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
RNU6-88P-201ENST00000606801 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
RNU6-88P-201ENST00000606801 CAMK2BQ13554 666 aa9.34□□□□□ -0.91
RNU6-88P-201ENST00000606801 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
RNU6-88P-201ENST00000606801 POTEMA6NI47 508 aa9.33□□□□□ -0.92
RNU6-88P-201ENST00000606801 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
RNU6-88P-201ENST00000606801 POTEGQ6S5H5 508 aa9.33□□□□□ -0.92
RNU6-88P-201ENST00000606801 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
RNU6-88P-201ENST00000606801 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
RNU6-88P-201ENST00000606801 SLC34A2O95436 690 aa9.32□□□□□ -0.92
RNU6-88P-201ENST00000606801 HOXB1P14653 301 aaPredicted RBP9.32□□□□□ -0.92
RNU6-88P-201ENST00000606801 NBR1Q14596 966 aa9.31□□□□□ -0.92
RNU6-88P-201ENST00000606801 PPP1R15BQ5SWA1 713 aa9.31□□□□□ -0.92
RNU6-88P-201ENST00000606801 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
RNU6-88P-201ENST00000606801 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
RNU6-88P-201ENST00000606801 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
RNU6-88P-201ENST00000606801 EMILIN3Q9NT22 766 aa9.28□□□□□ -0.92
RNU6-88P-201ENST00000606801 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
RNU6-88P-201ENST00000606801 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
RNU6-88P-201ENST00000606801 EMP3P54852 163 aa9.27□□□□□ -0.93
RNU6-88P-201ENST00000606801 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
RNU6-88P-201ENST00000606801 PTCD2Q8WV60 388 aaKnown RBP9.26□□□□□ -0.93
RNU6-88P-201ENST00000606801 PCDHGA4Q9Y5G9 962 aa9.26□□□□□ -0.93
RNU6-88P-201ENST00000606801 KHSRPQ92945 711 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU6-88P-201ENST00000606801 FAM205CA6NFA0 338 aa9.22□□□□□ -0.93
RNU6-88P-201ENST00000606801 SEMA3EO15041 775 aa9.22□□□□□ -0.93
RNU6-88P-201ENST00000606801 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
RNU6-88P-201ENST00000606801 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
RNU6-88P-201ENST00000606801 TBC1D12O60347 775 aa9.2□□□□□ -0.94
RNU6-88P-201ENST00000606801 NUDT7P0C024 238 aa9.2□□□□□ -0.94
RNU6-88P-201ENST00000606801 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
RNU6-88P-201ENST00000606801 HS3ST6Q96QI5 342 aa9.2□□□□□ -0.94
RNU6-88P-201ENST00000606801 ERBB3P21860 1342 aa9.2□□□□□ -0.94
RNU6-88P-201ENST00000606801 KDM4FA0A1W2PPD8 638 aa9.19□□□□□ -0.94
RNU6-88P-201ENST00000606801 TESPA1A2RU30 521 aaPredicted RBP9.19□□□□□ -0.94
RNU6-88P-201ENST00000606801 DPYSL4O14531 572 aa9.19□□□□□ -0.94
RNU6-88P-201ENST00000606801 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
RNU6-88P-201ENST00000606801 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
RNU6-88P-201ENST00000606801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU6-88P-201ENST00000606801 CDAN1Q8IWY9 1227 aa9.18□□□□□ -0.94
RNU6-88P-201ENST00000606801 UPF1Q92900 1129 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU6-88P-201ENST00000606801 ZNF316A6NFI3 1004 aaPredicted RBP9.17□□□□□ -0.94
RNU6-88P-201ENST00000606801 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
RNU6-88P-201ENST00000606801 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
RNU6-88P-201ENST00000606801 MLLT3P42568 568 aaPredicted RBP9.13□□□□□ -0.95
RNU6-88P-201ENST00000606801 MAP3K9P80192 1104 aa9.13□□□□□ -0.95
RNU6-88P-201ENST00000606801 PDIA6Q15084 440 aa9.13□□□□□ -0.95
RNU6-88P-201ENST00000606801 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
RNU6-88P-201ENST00000606801 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
RNU6-88P-201ENST00000606801 EVI5O60447 810 aa9.1□□□□□ -0.95
RNU6-88P-201ENST00000606801 ZNF687Q8N1G0 1237 aa9.1□□□□□ -0.95
RNU6-88P-201ENST00000606801 ANO8Q9HCE9 1232 aaPredicted RBP9.1□□□□□ -0.95
RNU6-88P-201ENST00000606801 PSDA5PKW4 1024 aaPredicted RBP9.08□□□□□ -0.96
RNU6-88P-201ENST00000606801 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
RNU6-88P-201ENST00000606801 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
RNU6-88P-201ENST00000606801 PTGER2P43116 358 aa9.04□□□□□ -0.96
RNU6-88P-201ENST00000606801 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
RNU6-88P-201ENST00000606801 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
RNU6-88P-201ENST00000606801 FOSBP53539 338 aa9.02□□□□□ -0.97
RNU6-88P-201ENST00000606801 SMYD5Q6GMV2 418 aa9.02□□□□□ -0.97
RNU6-88P-201ENST00000606801 POTEEQ6S8J3 1075 aa9.02□□□□□ -0.97
RNU6-88P-201ENST00000606801 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
RNU6-88P-201ENST00000606801 PRIM1P49642 420 aaKnown RBP9.01□□□□□ -0.97
RNU6-88P-201ENST00000606801 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
RNU6-88P-201ENST00000606801 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
RNU6-88P-201ENST00000606801 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
RNU6-88P-201ENST00000606801 OSBPP22059 807 aa9□□□□□ -0.97
RNU6-88P-201ENST00000606801 DDX12PQ92771 950 aa9□□□□□ -0.97
RNU6-88P-201ENST00000606801 TULP1O00294 542 aaPredicted RBP8.99□□□□□ -0.97
RNU6-88P-201ENST00000606801 PBX2P40425 430 aa8.99□□□□□ -0.97
RNU6-88P-201ENST00000606801 ARHGAP33O14559 1287 aa8.97□□□□□ -0.97
RNU6-88P-201ENST00000606801 PHF14O94880 888 aa8.97□□□□□ -0.97
RNU6-88P-201ENST00000606801 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms