RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 MAGI2Q86UL8 1455 aa39.79■■■■□ 3.96
SNX5-219ENST00000606602 POGZQ7Z3K3 1410 aa39.78■■■■□ 3.96
SNX5-219ENST00000606602 CLIP1P30622 1438 aa39.76■■■■□ 3.96
SNX5-219ENST00000606602 KIF14Q15058 1648 aa39.76■■■■□ 3.95
SNX5-219ENST00000606602 MYO5CQ9NQX4 1742 aa39.73■■■■□ 3.95
SNX5-219ENST00000606602 CASKIN1Q8WXD9 1431 aa39.67■■■■□ 3.94
SNX5-219ENST00000606602 LRRIQ1Q96JM4 1722 aa39.66■■■■□ 3.94
SNX5-219ENST00000606602 ARHGAP5Q13017 1502 aa39.65■■■■□ 3.94
SNX5-219ENST00000606602 RIMS1Q86UR5 1692 aaKnown RBP39.64■■■■□ 3.94
SNX5-219ENST00000606602 MLECQ14165 292 aa39.64■■■■□ 3.94
SNX5-219ENST00000606602 PCF11O94913 1555 aaKnown RBP39.63■■■■□ 3.94
SNX5-219ENST00000606602 CCDC18Q5T9S5 1454 aa39.62■■■■□ 3.93
SNX5-219ENST00000606602 SIGLEC1Q9BZZ2 1709 aa39.61■■■■□ 3.93
SNX5-219ENST00000606602 PLPPR3Q6T4P5 718 aa39.6■■■■□ 3.93
SNX5-219ENST00000606602 ATP10AO60312 1499 aa39.59■■■■□ 3.93
SNX5-219ENST00000606602 ZNF518AQ6AHZ1 1483 aa39.57■■■■□ 3.93
SNX5-219ENST00000606602 AFAP1Q8N556 730 aa39.57■■■■□ 3.93
SNX5-219ENST00000606602 C9orf84Q5VXU9 1444 aa39.54■■■■□ 3.92
SNX5-219ENST00000606602 LMTK3Q96Q04 1460 aa39.52■■■■□ 3.92
SNX5-219ENST00000606602 MYT1LQ9UL68 1186 aa39.52■■■■□ 3.92
SNX5-219ENST00000606602 FYCO1Q9BQS8 1478 aa39.5■■■■□ 3.91
SNX5-219ENST00000606602 KDM5CP41229 1560 aa39.46■■■■□ 3.91
SNX5-219ENST00000606602 CDC42BPBQ9Y5S2 1711 aa39.45■■■■□ 3.91
SNX5-219ENST00000606602 PREX2Q70Z35 1606 aa39.43■■■■□ 3.9
SNX5-219ENST00000606602 ARHGEF12Q9NZN5 1544 aa39.4■■■■□ 3.9
SNX5-219ENST00000606602 FER1L4A9Z1Z3 1794 aa39.4■■■■□ 3.9
SNX5-219ENST00000606602 HSPA2P54652 639 aa39.39■■■■□ 3.9
SNX5-219ENST00000606602 TRAPPC8Q9Y2L5 1435 aa39.37■■■■□ 3.89
SNX5-219ENST00000606602 ABCC1P33527 1531 aa39.36■■■■□ 3.89
SNX5-219ENST00000606602 MLH3Q9UHC1 1453 aa39.35■■■■□ 3.89
SNX5-219ENST00000606602 DIP2CQ9Y2E4 1556 aa39.33■■■■□ 3.89
SNX5-219ENST00000606602 ZNF777Q9ULD5 760 aaPredicted RBP39.31■■■■□ 3.88
SNX5-219ENST00000606602 CEBPAP49715 358 aaPredicted RBP39.29■■■■□ 3.88
SNX5-219ENST00000606602 CDC42BPAQ5VT25 1732 aa39.28■■■■□ 3.88
SNX5-219ENST00000606602 ITSN2Q9NZM3 1697 aa39.26■■■■□ 3.88
SNX5-219ENST00000606602 ABCA6Q8N139 1617 aa39.26■■■■□ 3.88
SNX5-219ENST00000606602 REREQ9P2R6 1566 aa39.25■■■■□ 3.87
SNX5-219ENST00000606602 GPATCH8Q9UKJ3 1502 aaKnown RBP39.24■■■■□ 3.87
SNX5-219ENST00000606602 FBXO41Q8TF61 875 aa39.22■■■■□ 3.87
SNX5-219ENST00000606602 MTUS2Q5JR59 1369 aa39.18■■■■□ 3.86
SNX5-219ENST00000606602 SAMD9LQ8IVG5 1584 aa39.16■■■■□ 3.86
SNX5-219ENST00000606602 AGLP35573 1532 aa39.16■■■■□ 3.86
SNX5-219ENST00000606602 HNRNPMP52272 730 aaKnown RBP eCLIP39.16■■■■□ 3.86
SNX5-219ENST00000606602 CFDP1Q9UEE9 299 aaPredicted RBP39.16■■■■□ 3.86
SNX5-219ENST00000606602 CCNB3Q8WWL7 1395 aa39.16■■■■□ 3.86
SNX5-219ENST00000606602 ESF1Q9H501 851 aaKnown RBP39.14■■■■□ 3.86
SNX5-219ENST00000606602 SYCP2Q9BX26 1530 aa39.14■■■■□ 3.86
SNX5-219ENST00000606602 KIDINS220Q9ULH0 1771 aa39.13■■■■□ 3.86
SNX5-219ENST00000606602 SPAG9O60271 1321 aaKnown RBP39.12■■■■□ 3.85
SNX5-219ENST00000606602 CEP162Q5TB80 1403 aa39.08■■■■□ 3.85
SNX5-219ENST00000606602 PREX1Q8TCU6 1659 aa39.08■■■■□ 3.85
SNX5-219ENST00000606602 KIAA1107Q9UPP5 1409 aa39.06■■■■□ 3.84
SNX5-219ENST00000606602 PLEKHH2Q8IVE3 1493 aa39.06■■■■□ 3.84
SNX5-219ENST00000606602 UHRF1BP1Q6BDS2 1440 aa39.04■■■■□ 3.84
SNX5-219ENST00000606602 EHBP1L1Q8N3D4 1523 aa38.97■■■■□ 3.83
SNX5-219ENST00000606602 CNTLNQ9NXG0 1405 aa38.97■■■■□ 3.83
SNX5-219ENST00000606602 ATP7AQ04656 1500 aa38.96■■■■□ 3.83
SNX5-219ENST00000606602 C3P01024 1663 aa38.96■■■■□ 3.83
SNX5-219ENST00000606602 ZNF644Q9H582 1327 aaPredicted RBP38.94■■■■□ 3.82
SNX5-219ENST00000606602 TIAM1Q13009 1591 aa38.92■■■■□ 3.82
SNX5-219ENST00000606602 INO80Q9ULG1 1556 aaPredicted RBP38.9■■■■□ 3.82
SNX5-219ENST00000606602 SETD1BQ9UPS6 1966 aaKnown RBP38.9■■■■□ 3.82
SNX5-219ENST00000606602 DMRT2Q9Y5R5 561 aa38.89■■■■□ 3.82
SNX5-219ENST00000606602 A2MP01023 1474 aa38.88■■■■□ 3.81
SNX5-219ENST00000606602 CERKQ8TCT0 537 aa38.88■■■■□ 3.81
SNX5-219ENST00000606602 SUPT6HQ7KZ85 1726 aaKnown RBP38.86■■■■□ 3.81
SNX5-219ENST00000606602 MBD5Q9P267 1494 aa38.82■■■■□ 3.81
SNX5-219ENST00000606602 PLXNC1O60486 1568 aa38.82■■■■□ 3.8
SNX5-219ENST00000606602 ZMYM3Q14202 1370 aa38.82■■■■□ 3.8
SNX5-219ENST00000606602 GGT6Q6P531 493 aa38.8■■■■□ 3.8
SNX5-219ENST00000606602 STRCQ7RTU9 1775 aa38.8■■■■□ 3.8
SNX5-219ENST00000606602 LOC105371045A0A1W2PR82 267 aa38.78■■■■□ 3.8
SNX5-219ENST00000606602 MROH2AA6NES4 1674 aa38.76■■■■□ 3.8
SNX5-219ENST00000606602 NPATQ14207 1427 aa38.76■■■■□ 3.8
SNX5-219ENST00000606602 NCOA2Q15596 1464 aa38.76■■■■□ 3.8
SNX5-219ENST00000606602 RTEL1-TNFRSF6BF6WH68 1400 aa38.72■■■■□ 3.79
SNX5-219ENST00000606602 ADGBQ8N7X0 1667 aa38.7■■■■□ 3.79
SNX5-219ENST00000606602 CLTCQ00610 1675 aaKnown RBP38.68■■■■□ 3.78
SNX5-219ENST00000606602 PTPRTO14522 1441 aa38.68■■■■□ 3.78
SNX5-219ENST00000606602 PPP6R1Q9UPN7 881 aa38.67■■■■□ 3.78
SNX5-219ENST00000606602 VPS8Q8N3P4 1428 aa38.66■■■■□ 3.78
SNX5-219ENST00000606602 CAMSAP2Q08AD1 1489 aa38.66■■■■□ 3.78
SNX5-219ENST00000606602 DHX29Q7Z478 1369 aaKnown RBP38.65■■■■□ 3.78
SNX5-219ENST00000606602 CCDC141Q6ZP82 1450 aa38.65■■■■□ 3.78
SNX5-219ENST00000606602 RSPH4AQ5TD94 716 aa38.64■■■■□ 3.78
SNX5-219ENST00000606602 NCOA1Q15788 1441 aa38.63■■■■□ 3.78
SNX5-219ENST00000606602 PTPRKQ15262 1439 aa38.61■■■■□ 3.77
SNX5-219ENST00000606602 LRRC9Q6ZRR7 1453 aa38.58■■■■□ 3.77
SNX5-219ENST00000606602 CAMSAP1Q5T5Y3 1602 aa38.56■■■■□ 3.76
SNX5-219ENST00000606602 KIF3BO15066 747 aa38.56■■■■□ 3.76
SNX5-219ENST00000606602 TSPY4P0CV99 314 aa38.52■■■■□ 3.76
SNX5-219ENST00000606602 TSPY10P0CW01 314 aa38.52■■■■□ 3.76
SNX5-219ENST00000606602 NCKAP5LQ9HCH0 1330 aa38.5■■■■□ 3.75
SNX5-219ENST00000606602 MYO3AQ8NEV4 1616 aa38.49■■■■□ 3.75
SNX5-219ENST00000606602 KANK4Q5T7N3 995 aaPredicted RBP38.48■■■■□ 3.75
SNX5-219ENST00000606602 ARHGEF5Q12774 1597 aa38.48■■■■□ 3.75
SNX5-219ENST00000606602 CEP170BQ9Y4F5 1589 aaPredicted RBP38.45■■■■□ 3.75
SNX5-219ENST00000606602 MAP3K1Q13233 1512 aa38.43■■■■□ 3.74
SNX5-219ENST00000606602 ZNF142P52746 1687 aaPredicted RBP38.43■■■■□ 3.74
SNX5-219ENST00000606602 WASHC2CQ9Y4E1 1318 aa38.41■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms