RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
CUX2P1-201ENST00000606426 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
CUX2P1-201ENST00000606426 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
CUX2P1-201ENST00000606426 TSPOAP1O95153 1857 aa11.6□□□□□ -0.55
CUX2P1-201ENST00000606426 PREX2Q70Z35 1606 aa11.58□□□□□ -0.56
CUX2P1-201ENST00000606426 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
CUX2P1-201ENST00000606426 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
CUX2P1-201ENST00000606426 MIA2Q96PC5 1412 aa11.57□□□□□ -0.56
CUX2P1-201ENST00000606426 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
CUX2P1-201ENST00000606426 KDM6BO15054 1643 aa11.57□□□□□ -0.56
CUX2P1-201ENST00000606426 MYOM3Q5VTT5 1437 aa11.56□□□□□ -0.56
CUX2P1-201ENST00000606426 DENND4BO75064 1496 aaPredicted RBP11.56□□□□□ -0.56
CUX2P1-201ENST00000606426 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
CUX2P1-201ENST00000606426 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
CUX2P1-201ENST00000606426 RSPH4AQ5TD94 716 aa11.55□□□□□ -0.56
CUX2P1-201ENST00000606426 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
CUX2P1-201ENST00000606426 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
CUX2P1-201ENST00000606426 CDC42BPBQ9Y5S2 1711 aa11.53□□□□□ -0.56
CUX2P1-201ENST00000606426 ZNF518AQ6AHZ1 1483 aa11.52□□□□□ -0.56
CUX2P1-201ENST00000606426 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.57
CUX2P1-201ENST00000606426 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
CUX2P1-201ENST00000606426 ABCC1P33527 1531 aa11.51□□□□□ -0.57
CUX2P1-201ENST00000606426 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
CUX2P1-201ENST00000606426 FGD6Q6ZV73 1430 aa11.5□□□□□ -0.57
CUX2P1-201ENST00000606426 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
CUX2P1-201ENST00000606426 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
CUX2P1-201ENST00000606426 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
CUX2P1-201ENST00000606426 TSPY4P0CV99 314 aa11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 TSPY10P0CW01 314 aa11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 HNRNPMP52272 730 aaKnown RBP eCLIP11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 AFAP1Q8N556 730 aa11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 ZNF644Q9H582 1327 aaPredicted RBP11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 SYCP2Q9BX26 1530 aa11.48□□□□□ -0.57
CUX2P1-201ENST00000606426 ZMYM4Q5VZL5 1548 aa11.47□□□□□ -0.57
CUX2P1-201ENST00000606426 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
CUX2P1-201ENST00000606426 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
CUX2P1-201ENST00000606426 MBD5Q9P267 1494 aa11.47□□□□□ -0.57
CUX2P1-201ENST00000606426 CCDC141Q6ZP82 1450 aa11.46□□□□□ -0.57
CUX2P1-201ENST00000606426 TRAPPC8Q9Y2L5 1435 aa11.46□□□□□ -0.57
CUX2P1-201ENST00000606426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.57
CUX2P1-201ENST00000606426 SPAG9O60271 1321 aaKnown RBP11.46□□□□□ -0.57
CUX2P1-201ENST00000606426 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
CUX2P1-201ENST00000606426 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.58
CUX2P1-201ENST00000606426 KDM5CP41229 1560 aa11.45□□□□□ -0.58
CUX2P1-201ENST00000606426 MLH3Q9UHC1 1453 aa11.45□□□□□ -0.58
CUX2P1-201ENST00000606426 RICTORQ6R327 1708 aa11.45□□□□□ -0.58
CUX2P1-201ENST00000606426 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
CUX2P1-201ENST00000606426 FRMPD1Q5SYB0 1578 aa11.45□□□□□ -0.58
CUX2P1-201ENST00000606426 RTEL1-TNFRSF6BF6WH68 1400 aa11.44□□□□□ -0.58
CUX2P1-201ENST00000606426 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
CUX2P1-201ENST00000606426 ZFYVE16Q7Z3T8 1539 aa11.43□□□□□ -0.58
CUX2P1-201ENST00000606426 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
CUX2P1-201ENST00000606426 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
CUX2P1-201ENST00000606426 SHANK2Q9UPX8 1470 aa11.41□□□□□ -0.58
CUX2P1-201ENST00000606426 ARHGEF40Q8TER5 1519 aa11.4□□□□□ -0.58
CUX2P1-201ENST00000606426 ATP10AO60312 1499 aa11.4□□□□□ -0.58
CUX2P1-201ENST00000606426 ABCC5O15440 1437 aa11.4□□□□□ -0.58
CUX2P1-201ENST00000606426 DAPK1P53355 1430 aa11.4□□□□□ -0.58
CUX2P1-201ENST00000606426 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
CUX2P1-201ENST00000606426 YEATS2Q9ULM3 1422 aa11.39□□□□□ -0.59
CUX2P1-201ENST00000606426 ATP7AQ04656 1500 aa11.39□□□□□ -0.59
CUX2P1-201ENST00000606426 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
CUX2P1-201ENST00000606426 DNMT1P26358 1616 aaKnown RBP11.38□□□□□ -0.59
CUX2P1-201ENST00000606426 INO80Q9ULG1 1556 aaPredicted RBP11.37□□□□□ -0.59
CUX2P1-201ENST00000606426 ANKRD30AQ9BXX3 1397 aa11.37□□□□□ -0.59
CUX2P1-201ENST00000606426 REREQ9P2R6 1566 aa11.37□□□□□ -0.59
CUX2P1-201ENST00000606426 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
CUX2P1-201ENST00000606426 KIDINS220Q9ULH0 1771 aa11.36□□□□□ -0.59
CUX2P1-201ENST00000606426 DHX29Q7Z478 1369 aaKnown RBP11.35□□□□□ -0.59
CUX2P1-201ENST00000606426 A2MP01023 1474 aa11.35□□□□□ -0.59
CUX2P1-201ENST00000606426 DIP2CQ9Y2E4 1556 aa11.35□□□□□ -0.59
CUX2P1-201ENST00000606426 ADGRL2O95490 1459 aa11.34□□□□□ -0.59
CUX2P1-201ENST00000606426 ROCK1Q13464 1354 aa11.34□□□□□ -0.59
CUX2P1-201ENST00000606426 ABCA6Q8N139 1617 aa11.34□□□□□ -0.59
CUX2P1-201ENST00000606426 AGLP35573 1532 aa11.34□□□□□ -0.59
CUX2P1-201ENST00000606426 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
CUX2P1-201ENST00000606426 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
CUX2P1-201ENST00000606426 NCOA1Q15788 1441 aa11.33□□□□□ -0.6
CUX2P1-201ENST00000606426 CROCC2H7BZ55 1655 aa11.33□□□□□ -0.6
CUX2P1-201ENST00000606426 KIF15Q9NS87 1388 aa11.32□□□□□ -0.6
CUX2P1-201ENST00000606426 ITGAEP38570 1179 aa11.32□□□□□ -0.6
CUX2P1-201ENST00000606426 RRP7BPQ9NSQ0 103 aa11.32□□□□□ -0.6
CUX2P1-201ENST00000606426 ADGBQ8N7X0 1667 aa11.32□□□□□ -0.6
CUX2P1-201ENST00000606426 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
CUX2P1-201ENST00000606426 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
CUX2P1-201ENST00000606426 ERBINQ96RT1 1412 aa11.3□□□□□ -0.6
CUX2P1-201ENST00000606426 PTPRKQ15262 1439 aa11.29□□□□□ -0.6
CUX2P1-201ENST00000606426 KIF3BO15066 747 aa11.28□□□□□ -0.6
CUX2P1-201ENST00000606426 ESF1Q9H501 851 aaKnown RBP11.28□□□□□ -0.6
CUX2P1-201ENST00000606426 ANKRD50Q9ULJ7 1429 aa11.27□□□□□ -0.6
CUX2P1-201ENST00000606426 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
CUX2P1-201ENST00000606426 MLECQ14165 292 aa11.26□□□□□ -0.61
CUX2P1-201ENST00000606426 GGT6Q6P531 493 aa11.26□□□□□ -0.61
CUX2P1-201ENST00000606426 EIF2AK4Q9P2K8 1649 aaKnown RBP11.26□□□□□ -0.61
CUX2P1-201ENST00000606426 CNTLNQ9NXG0 1405 aa11.26□□□□□ -0.61
CUX2P1-201ENST00000606426 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
CUX2P1-201ENST00000606426 BCORL1Q5H9F3 1711 aa11.25□□□□□ -0.61
CUX2P1-201ENST00000606426 HFM1A2PYH4 1435 aa11.25□□□□□ -0.61
CUX2P1-201ENST00000606426 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms