RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 KIF3CO14782 793 aa7.79□□□□□ -1.16
HMGN2P28-201ENST00000606102 POTEB3A0JP26 581 aa7.78□□□□□ -1.16
HMGN2P28-201ENST00000606102 POTEBQ6S5H4 581 aa7.78□□□□□ -1.16
HMGN2P28-201ENST00000606102 C2orf72A6NCS6 295 aa7.76□□□□□ -1.17
HMGN2P28-201ENST00000606102 CDAN1Q8IWY9 1227 aa7.76□□□□□ -1.17
HMGN2P28-201ENST00000606102 EMP3P54852 163 aa7.74□□□□□ -1.17
HMGN2P28-201ENST00000606102 HOXB1P14653 301 aaPredicted RBP7.73□□□□□ -1.17
HMGN2P28-201ENST00000606102 DOK7Q18PE1 504 aa7.73□□□□□ -1.17
HMGN2P28-201ENST00000606102 PLSCR2Q9NRY7 297 aa7.73□□□□□ -1.17
HMGN2P28-201ENST00000606102 PCDH10Q9P2E7 1040 aa7.73□□□□□ -1.17
HMGN2P28-201ENST00000606102 DCAF8L2P0C7V8 631 aa7.72□□□□□ -1.17
HMGN2P28-201ENST00000606102 FAM205CA6NFA0 338 aa7.71□□□□□ -1.18
HMGN2P28-201ENST00000606102 GTPBP6O43824 516 aaPredicted RBP7.71□□□□□ -1.18
HMGN2P28-201ENST00000606102 GPR153Q6NV75 609 aa7.71□□□□□ -1.18
HMGN2P28-201ENST00000606102 ZNF710Q8N1W2 664 aa7.71□□□□□ -1.18
HMGN2P28-201ENST00000606102 HS3ST6Q96QI5 342 aa7.71□□□□□ -1.18
HMGN2P28-201ENST00000606102 KHSRPQ92945 711 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGN2P28-201ENST00000606102 ARSIQ5FYB1 569 aa7.68□□□□□ -1.18
HMGN2P28-201ENST00000606102 BCANQ96GW7 911 aa7.68□□□□□ -1.18
HMGN2P28-201ENST00000606102 TMC2Q8TDI7 906 aa7.67□□□□□ -1.18
HMGN2P28-201ENST00000606102 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
HMGN2P28-201ENST00000606102 KRTAP3-2Q9BYR7 98 aa7.67□□□□□ -1.18
HMGN2P28-201ENST00000606102 ZSWIM6Q9HCJ5 1215 aa7.67□□□□□ -1.18
HMGN2P28-201ENST00000606102 RIMBP2O15034 1052 aa7.66□□□□□ -1.18
HMGN2P28-201ENST00000606102 GPHNQ9NQX3 736 aaPredicted RBP7.64□□□□□ -1.19
HMGN2P28-201ENST00000606102 ERBB3P21860 1342 aa7.63□□□□□ -1.19
HMGN2P28-201ENST00000606102 DSG2Q14126 1118 aa7.63□□□□□ -1.19
HMGN2P28-201ENST00000606102 NCKAP5LQ9HCH0 1330 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 SLC34A2O95436 690 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 FOXK1P85037 733 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 PLCB2Q00722 1185 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 VARS2Q5ST30 1063 aaKnown RBP7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 PLPP6Q8IY26 295 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 CRISPLD2Q9H0B8 497 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 PCDHGA4Q9Y5G9 962 aa7.62□□□□□ -1.19
HMGN2P28-201ENST00000606102 RYDENQ9NUL5 291 aaKnown RBP7.61□□□□□ -1.19
HMGN2P28-201ENST00000606102 NUDT7P0C024 238 aa7.6□□□□□ -1.19
HMGN2P28-201ENST00000606102 CADPS2Q86UW7 1296 aa7.6□□□□□ -1.19
HMGN2P28-201ENST00000606102 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
HMGN2P28-201ENST00000606102 ZNF316A6NFI3 1004 aaPredicted RBP7.58□□□□□ -1.2
HMGN2P28-201ENST00000606102 SPNS2Q8IVW8 549 aa7.58□□□□□ -1.2
HMGN2P28-201ENST00000606102 PTCD2Q8WV60 388 aaKnown RBP7.56□□□□□ -1.2
HMGN2P28-201ENST00000606102 BBXQ8WY36 941 aaPredicted RBP7.56□□□□□ -1.2
HMGN2P28-201ENST00000606102 LHX6Q9UPM6 363 aa7.56□□□□□ -1.2
HMGN2P28-201ENST00000606102 PPP1R15BQ5SWA1 713 aa7.55□□□□□ -1.2
HMGN2P28-201ENST00000606102 ZNF687Q8N1G0 1237 aa7.55□□□□□ -1.2
HMGN2P28-201ENST00000606102 POTEEQ6S8J3 1075 aa7.54□□□□□ -1.2
HMGN2P28-201ENST00000606102 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
HMGN2P28-201ENST00000606102 MMRN1Q13201 1228 aa7.53□□□□□ -1.2
HMGN2P28-201ENST00000606102 OXER1Q8TDS5 423 aa7.53□□□□□ -1.2
HMGN2P28-201ENST00000606102 PDE4AP27815 886 aa7.52□□□□□ -1.21
HMGN2P28-201ENST00000606102 MFSD10Q14728 455 aa7.52□□□□□ -1.21
HMGN2P28-201ENST00000606102 UPF1Q92900 1129 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGN2P28-201ENST00000606102 LARP6Q9BRS8 491 aaKnown RBP7.52□□□□□ -1.21
HMGN2P28-201ENST00000606102 DDX27Q96GQ7 796 aaKnown RBP7.49□□□□□ -1.21
HMGN2P28-201ENST00000606102 EMILIN3Q9NT22 766 aa7.48□□□□□ -1.21
HMGN2P28-201ENST00000606102 ERICH6Q7L0X2 663 aa7.47□□□□□ -1.21
HMGN2P28-201ENST00000606102 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
HMGN2P28-201ENST00000606102 AXIN2Q9Y2T1 843 aa7.47□□□□□ -1.21
HMGN2P28-201ENST00000606102 SPRYD3Q8NCJ5 442 aa7.46□□□□□ -1.22
HMGN2P28-201ENST00000606102 PAXIP1Q6ZW49 1069 aaPredicted RBP7.45□□□□□ -1.22
HMGN2P28-201ENST00000606102 TBC1D12O60347 775 aa7.44□□□□□ -1.22
HMGN2P28-201ENST00000606102 LSM11P83369 360 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGN2P28-201ENST00000606102 CFAP44Q96MT7 982 aa7.44□□□□□ -1.22
HMGN2P28-201ENST00000606102 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
HMGN2P28-201ENST00000606102 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.43□□□□□ -1.22
HMGN2P28-201ENST00000606102 CAMK2BQ13554 666 aa7.42□□□□□ -1.22
HMGN2P28-201ENST00000606102 ANKRD13DQ6ZTN6 518 aa7.42□□□□□ -1.22
HMGN2P28-201ENST00000606102 EVI5O60447 810 aa7.41□□□□□ -1.22
HMGN2P28-201ENST00000606102 PBX2P40425 430 aa7.41□□□□□ -1.22
HMGN2P28-201ENST00000606102 PSEN2P49810 448 aa7.41□□□□□ -1.22
HMGN2P28-201ENST00000606102 DMRTA1Q5VZB9 504 aa7.41□□□□□ -1.22
HMGN2P28-201ENST00000606102 ANO8Q9HCE9 1232 aaPredicted RBP7.41□□□□□ -1.22
HMGN2P28-201ENST00000606102 PSDA5PKW4 1024 aaPredicted RBP7.4□□□□□ -1.22
HMGN2P28-201ENST00000606102 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
HMGN2P28-201ENST00000606102 PRKCSHP14314 528 aaPredicted RBP7.39□□□□□ -1.23
HMGN2P28-201ENST00000606102 FOSBP53539 338 aa7.39□□□□□ -1.23
HMGN2P28-201ENST00000606102 PPP4R3BQ5MIZ7 849 aa7.39□□□□□ -1.23
HMGN2P28-201ENST00000606102 ZNF454Q8N9F8 522 aa7.38□□□□□ -1.23
HMGN2P28-201ENST00000606102 ARXQ96QS3 562 aa7.38□□□□□ -1.23
HMGN2P28-201ENST00000606102 DPYSL4O14531 572 aa7.37□□□□□ -1.23
HMGN2P28-201ENST00000606102 MAP3K9P80192 1104 aa7.37□□□□□ -1.23
HMGN2P28-201ENST00000606102 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
HMGN2P28-201ENST00000606102 RNF166Q96A37 237 aaPredicted RBP7.36□□□□□ -1.23
HMGN2P28-201ENST00000606102 KCNK17Q96T54 332 aa7.36□□□□□ -1.23
HMGN2P28-201ENST00000606102 MYT1LQ9UL68 1186 aa7.36□□□□□ -1.23
HMGN2P28-201ENST00000606102 ADGRD1Q6QNK2 874 aa7.35□□□□□ -1.23
HMGN2P28-201ENST00000606102 JPH4Q96JJ6 628 aa7.35□□□□□ -1.23
HMGN2P28-201ENST00000606102 ADAM33Q9BZ11 813 aa7.35□□□□□ -1.23
HMGN2P28-201ENST00000606102 BCL2L12Q9HB09 334 aa7.34□□□□□ -1.23
HMGN2P28-201ENST00000606102 TSHZ2Q9NRE2 1034 aa7.34□□□□□ -1.23
HMGN2P28-201ENST00000606102 HRO43593 1189 aa7.33□□□□□ -1.24
HMGN2P28-201ENST00000606102 PCDHGA10Q9Y5H3 936 aa7.33□□□□□ -1.24
HMGN2P28-201ENST00000606102 ZDHHC16Q969W1 377 aa7.32□□□□□ -1.24
HMGN2P28-201ENST00000606102 PTGER2P43116 358 aa7.31□□□□□ -1.24
HMGN2P28-201ENST00000606102 TK2O00142 265 aa7.3□□□□□ -1.24
HMGN2P28-201ENST00000606102 VPS9D1Q9Y2B5 631 aa7.29□□□□□ -1.24
HMGN2P28-201ENST00000606102 PHF14O94880 888 aa7.28□□□□□ -1.24
HMGN2P28-201ENST00000606102 COL9A1P20849 921 aa7.28□□□□□ -1.24
HMGN2P28-201ENST00000606102 PTPREP23469 700 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms