RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 CDK11AQ9UQ88 783 aaPredicted RBP29.86■■■□□ 2.37
CCDC12-213ENST00000605875 PCF11O94913 1555 aaKnown RBP29.85■■■□□ 2.37
CCDC12-213ENST00000605875 SIGLEC1Q9BZZ2 1709 aa29.82■■■□□ 2.36
CCDC12-213ENST00000605875 MYO5CQ9NQX4 1742 aa29.82■■■□□ 2.36
CCDC12-213ENST00000605875 EFCAB2Q5VUJ9 269 aa29.82■■■□□ 2.36
CCDC12-213ENST00000605875 LMTK3Q96Q04 1460 aa29.81■■■□□ 2.36
CCDC12-213ENST00000605875 PLPPR3Q6T4P5 718 aa29.79■■■□□ 2.36
CCDC12-213ENST00000605875 MLECQ14165 292 aa29.78■■■□□ 2.36
CCDC12-213ENST00000605875 KIF14Q15058 1648 aa29.78■■■□□ 2.36
CCDC12-213ENST00000605875 TROQ12816 1431 aaPredicted RBP29.75■■■□□ 2.35
CCDC12-213ENST00000605875 FBXO41Q8TF61 875 aa29.73■■■□□ 2.35
CCDC12-213ENST00000605875 ATP10AO60312 1499 aa29.73■■■□□ 2.35
CCDC12-213ENST00000605875 CLIP1P30622 1438 aa29.72■■■□□ 2.35
CCDC12-213ENST00000605875 LRRIQ1Q96JM4 1722 aa29.72■■■□□ 2.35
CCDC12-213ENST00000605875 FER1L4A9Z1Z3 1794 aa29.71■■■□□ 2.35
CCDC12-213ENST00000605875 ARHGAP5Q13017 1502 aa29.7■■■□□ 2.34
CCDC12-213ENST00000605875 C9orf84Q5VXU9 1444 aa29.69■■■□□ 2.34
CCDC12-213ENST00000605875 HSPA2P54652 639 aa29.68■■■□□ 2.34
CCDC12-213ENST00000605875 ZNF518AQ6AHZ1 1483 aa29.67■■■□□ 2.34
CCDC12-213ENST00000605875 AFAP1Q8N556 730 aa29.64■■■□□ 2.34
CCDC12-213ENST00000605875 ARHGEF12Q9NZN5 1544 aa29.63■■■□□ 2.33
CCDC12-213ENST00000605875 MYT1LQ9UL68 1186 aa29.62■■■□□ 2.33
CCDC12-213ENST00000605875 KDM5CP41229 1560 aa29.6■■■□□ 2.33
CCDC12-213ENST00000605875 CDC42BPBQ9Y5S2 1711 aa29.6■■■□□ 2.33
CCDC12-213ENST00000605875 CASKIN1Q8WXD9 1431 aa29.59■■■□□ 2.33
CCDC12-213ENST00000605875 CCDC18Q5T9S5 1454 aa29.58■■■□□ 2.33
CCDC12-213ENST00000605875 PREX2Q70Z35 1606 aa29.53■■■□□ 2.32
CCDC12-213ENST00000605875 CEBPAP49715 358 aaPredicted RBP29.53■■■□□ 2.32
CCDC12-213ENST00000605875 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
CCDC12-213ENST00000605875 MLH3Q9UHC1 1453 aa29.49■■■□□ 2.31
CCDC12-213ENST00000605875 PREX1Q8TCU6 1659 aa29.49■■■□□ 2.31
CCDC12-213ENST00000605875 TRAPPC8Q9Y2L5 1435 aa29.48■■■□□ 2.31
CCDC12-213ENST00000605875 ABCC1P33527 1531 aa29.48■■■□□ 2.31
CCDC12-213ENST00000605875 REREQ9P2R6 1566 aa29.47■■■□□ 2.31
CCDC12-213ENST00000605875 ABCA6Q8N139 1617 aa29.47■■■□□ 2.31
CCDC12-213ENST00000605875 ITSN2Q9NZM3 1697 aa29.47■■■□□ 2.31
CCDC12-213ENST00000605875 FYCO1Q9BQS8 1478 aa29.46■■■□□ 2.31
CCDC12-213ENST00000605875 CDC42BPAQ5VT25 1732 aa29.45■■■□□ 2.3
CCDC12-213ENST00000605875 SETD1BQ9UPS6 1966 aaKnown RBP29.4■■■□□ 2.3
CCDC12-213ENST00000605875 AGLP35573 1532 aa29.39■■■□□ 2.3
CCDC12-213ENST00000605875 CERKQ8TCT0 537 aa29.38■■■□□ 2.29
CCDC12-213ENST00000605875 ZNF777Q9ULD5 760 aaPredicted RBP29.38■■■□□ 2.29
CCDC12-213ENST00000605875 KIDINS220Q9ULH0 1771 aa29.38■■■□□ 2.29
CCDC12-213ENST00000605875 UHRF1BP1Q6BDS2 1440 aa29.37■■■□□ 2.29
CCDC12-213ENST00000605875 ESF1Q9H501 851 aaKnown RBP29.37■■■□□ 2.29
CCDC12-213ENST00000605875 C3P01024 1663 aa29.34■■■□□ 2.29
CCDC12-213ENST00000605875 SAMD9LQ8IVG5 1584 aa29.32■■■□□ 2.28
CCDC12-213ENST00000605875 GPATCH8Q9UKJ3 1502 aaKnown RBP29.32■■■□□ 2.28
CCDC12-213ENST00000605875 DMRT2Q9Y5R5 561 aa29.31■■■□□ 2.28
CCDC12-213ENST00000605875 STRCQ7RTU9 1775 aa29.31■■■□□ 2.28
CCDC12-213ENST00000605875 CEP162Q5TB80 1403 aa29.29■■■□□ 2.28
CCDC12-213ENST00000605875 HNRNPMP52272 730 aaKnown RBP eCLIP29.29■■■□□ 2.283e-6■■□□□ 12.2
CCDC12-213ENST00000605875 SYCP2Q9BX26 1530 aa29.29■■■□□ 2.28
CCDC12-213ENST00000605875 SPAG9O60271 1321 aaKnown RBP29.27■■■□□ 2.28
CCDC12-213ENST00000605875 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.27
CCDC12-213ENST00000605875 CFDP1Q9UEE9 299 aaPredicted RBP29.25■■■□□ 2.27
CCDC12-213ENST00000605875 CCNB3Q8WWL7 1395 aa29.24■■■□□ 2.27
CCDC12-213ENST00000605875 MTUS2Q5JR59 1369 aa29.22■■■□□ 2.27
CCDC12-213ENST00000605875 KIAA1107Q9UPP5 1409 aa29.21■■■□□ 2.27
CCDC12-213ENST00000605875 PLEKHH2Q8IVE3 1493 aa29.21■■■□□ 2.27
CCDC12-213ENST00000605875 SUPT6HQ7KZ85 1726 aaKnown RBP29.2■■■□□ 2.27
CCDC12-213ENST00000605875 ATP7AQ04656 1500 aa29.19■■■□□ 2.26
CCDC12-213ENST00000605875 MROH2AA6NES4 1674 aa29.16■■■□□ 2.26
CCDC12-213ENST00000605875 PTPRTO14522 1441 aa29.15■■■□□ 2.26
CCDC12-213ENST00000605875 INO80Q9ULG1 1556 aaPredicted RBP29.14■■■□□ 2.26
CCDC12-213ENST00000605875 ZMYM3Q14202 1370 aa29.13■■■□□ 2.25
CCDC12-213ENST00000605875 A2MP01023 1474 aa29.12■■■□□ 2.25
CCDC12-213ENST00000605875 NPATQ14207 1427 aa29.11■■■□□ 2.25
CCDC12-213ENST00000605875 PLXNC1O60486 1568 aa29.1■■■□□ 2.25
CCDC12-213ENST00000605875 TIAM1Q13009 1591 aa29.09■■■□□ 2.25
CCDC12-213ENST00000605875 CLTCQ00610 1675 aaKnown RBP29.09■■■□□ 2.25
CCDC12-213ENST00000605875 ZNF644Q9H582 1327 aaPredicted RBP29.08■■■□□ 2.25
CCDC12-213ENST00000605875 NCOA1Q15788 1441 aa29.08■■■□□ 2.25
CCDC12-213ENST00000605875 EHBP1L1Q8N3D4 1523 aa29.08■■■□□ 2.25
CCDC12-213ENST00000605875 LOC105371045A0A1W2PR82 267 aa29.07■■■□□ 2.24
CCDC12-213ENST00000605875 GGT6Q6P531 493 aa29.07■■■□□ 2.24
CCDC12-213ENST00000605875 ADGBQ8N7X0 1667 aa29.04■■■□□ 2.24
CCDC12-213ENST00000605875 CAMSAP1Q5T5Y3 1602 aa29.04■■■□□ 2.24
CCDC12-213ENST00000605875 MBD5Q9P267 1494 aa29.02■■■□□ 2.24
CCDC12-213ENST00000605875 PPP6R1Q9UPN7 881 aa28.99■■■□□ 2.23
CCDC12-213ENST00000605875 LTBP4Q8N2S1 1624 aa28.98■■■□□ 2.23
CCDC12-213ENST00000605875 RTEL1-TNFRSF6BF6WH68 1400 aa28.97■■■□□ 2.23
CCDC12-213ENST00000605875 PTPRKQ15262 1439 aa28.97■■■□□ 2.23
CCDC12-213ENST00000605875 MYO3AQ8NEV4 1616 aa28.96■■■□□ 2.23
CCDC12-213ENST00000605875 NCKAP5LQ9HCH0 1330 aa28.95■■■□□ 2.23
CCDC12-213ENST00000605875 VPS8Q8N3P4 1428 aa28.94■■■□□ 2.22
CCDC12-213ENST00000605875 ZNF142P52746 1687 aaPredicted RBP28.94■■■□□ 2.22
CCDC12-213ENST00000605875 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
CCDC12-213ENST00000605875 CEP170BQ9Y4F5 1589 aaPredicted RBP28.91■■■□□ 2.22
CCDC12-213ENST00000605875 NCOA2Q15596 1464 aa28.91■■■□□ 2.22
CCDC12-213ENST00000605875 PKD2Q13563 968 aa28.89■■■□□ 2.22
CCDC12-213ENST00000605875 IQSEC2Q5JU85 1478 aa28.89■■■□□ 2.22
CCDC12-213ENST00000605875 PLA2R1Q13018 1463 aa28.88■■■□□ 2.21
CCDC12-213ENST00000605875 CCDC141Q6ZP82 1450 aa28.88■■■□□ 2.21
CCDC12-213ENST00000605875 CAMSAP2Q08AD1 1489 aa28.87■■■□□ 2.21
CCDC12-213ENST00000605875 KIF3BO15066 747 aa28.86■■■□□ 2.21
CCDC12-213ENST00000605875 RSPH4AQ5TD94 716 aa28.86■■■□□ 2.21
CCDC12-213ENST00000605875 ZNF335Q9H4Z2 1342 aaPredicted RBP28.84■■■□□ 2.21
CCDC12-213ENST00000605875 TCOF1Q13428 1488 aaKnown RBP28.84■■■□□ 2.21
CCDC12-213ENST00000605875 A2ML1A8K2U0 1454 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms