RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 RICTORQ6R327 1708 aa22.5■■□□□ 1.19
TUBE1-211ENST00000605457 FRMPD1Q5SYB0 1578 aa22.5■■□□□ 1.19
TUBE1-211ENST00000605457 SUPT6HQ7KZ85 1726 aaKnown RBP22.5■■□□□ 1.19
TUBE1-211ENST00000605457 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
TUBE1-211ENST00000605457 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
TUBE1-211ENST00000605457 ADGRL1O94910 1474 aa22.46■■□□□ 1.19
TUBE1-211ENST00000605457 GPATCH8Q9UKJ3 1502 aaKnown RBP22.45■■□□□ 1.18
TUBE1-211ENST00000605457 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
TUBE1-211ENST00000605457 DENND4BO75064 1496 aaPredicted RBP22.44■■□□□ 1.18
TUBE1-211ENST00000605457 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
TUBE1-211ENST00000605457 CCNB3Q8WWL7 1395 aa22.41■■□□□ 1.18
TUBE1-211ENST00000605457 ABCC1P33527 1531 aa22.4■■□□□ 1.18
TUBE1-211ENST00000605457 RAPGEF3O95398 923 aa22.4■■□□□ 1.18
TUBE1-211ENST00000605457 SCAPERQ9BY12 1400 aa22.39■■□□□ 1.18
TUBE1-211ENST00000605457 SAMD9LQ8IVG5 1584 aa22.39■■□□□ 1.17
TUBE1-211ENST00000605457 ZMYM4Q5VZL5 1548 aa22.39■■□□□ 1.17
TUBE1-211ENST00000605457 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
TUBE1-211ENST00000605457 KANK4Q5T7N3 995 aaPredicted RBP22.38■■□□□ 1.17
TUBE1-211ENST00000605457 APLP2Q06481 763 aa22.35■■□□□ 1.17
TUBE1-211ENST00000605457 KDM5CP41229 1560 aa22.34■■□□□ 1.17
TUBE1-211ENST00000605457 ARHGEF12Q9NZN5 1544 aa22.34■■□□□ 1.17
TUBE1-211ENST00000605457 ZNF518AQ6AHZ1 1483 aa22.33■■□□□ 1.17
TUBE1-211ENST00000605457 ARHGEF40Q8TER5 1519 aa22.33■■□□□ 1.17
TUBE1-211ENST00000605457 SYCP2Q9BX26 1530 aa22.32■■□□□ 1.16
TUBE1-211ENST00000605457 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
TUBE1-211ENST00000605457 PLEKHH2Q8IVE3 1493 aa22.29■■□□□ 1.16
TUBE1-211ENST00000605457 HECW2Q9P2P5 1572 aa22.28■■□□□ 1.16
TUBE1-211ENST00000605457 MAGI2Q86UL8 1455 aa22.28■■□□□ 1.16
TUBE1-211ENST00000605457 ZFYVE16Q7Z3T8 1539 aa22.28■■□□□ 1.16
TUBE1-211ENST00000605457 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
TUBE1-211ENST00000605457 TRAPPC8Q9Y2L5 1435 aa22.28■■□□□ 1.16
TUBE1-211ENST00000605457 KIAA1107Q9UPP5 1409 aa22.27■■□□□ 1.16
TUBE1-211ENST00000605457 MYOM3Q5VTT5 1437 aa22.24■■□□□ 1.15
TUBE1-211ENST00000605457 YEATS2Q9ULM3 1422 aa22.24■■□□□ 1.15
TUBE1-211ENST00000605457 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
TUBE1-211ENST00000605457 CAMSAP2Q08AD1 1489 aa22.23■■□□□ 1.15
TUBE1-211ENST00000605457 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
TUBE1-211ENST00000605457 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
TUBE1-211ENST00000605457 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
TUBE1-211ENST00000605457 SIGLEC1Q9BZZ2 1709 aa22.21■■□□□ 1.15
TUBE1-211ENST00000605457 ABCA6Q8N139 1617 aa22.2■■□□□ 1.14
TUBE1-211ENST00000605457 MBD5Q9P267 1494 aa22.2■■□□□ 1.14
TUBE1-211ENST00000605457 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
TUBE1-211ENST00000605457 HNRNPMP52272 730 aaKnown RBP eCLIP22.19■■□□□ 1.14
TUBE1-211ENST00000605457 INO80Q9ULG1 1556 aaPredicted RBP22.19■■□□□ 1.14
TUBE1-211ENST00000605457 DIP2CQ9Y2E4 1556 aa22.19■■□□□ 1.14
TUBE1-211ENST00000605457 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
TUBE1-211ENST00000605457 ATP7AQ04656 1500 aa22.15■■□□□ 1.14
TUBE1-211ENST00000605457 ATP10AO60312 1499 aa22.14■■□□□ 1.14
TUBE1-211ENST00000605457 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.14
TUBE1-211ENST00000605457 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.13
TUBE1-211ENST00000605457 REREQ9P2R6 1566 aa22.14■■□□□ 1.13
TUBE1-211ENST00000605457 CCDC141Q6ZP82 1450 aa22.13■■□□□ 1.13
TUBE1-211ENST00000605457 C9orf84Q5VXU9 1444 aa22.13■■□□□ 1.13
TUBE1-211ENST00000605457 FGD6Q6ZV73 1430 aa22.12■■□□□ 1.13
TUBE1-211ENST00000605457 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
TUBE1-211ENST00000605457 SPAG9O60271 1321 aaKnown RBP22.1■■□□□ 1.13
TUBE1-211ENST00000605457 ADAMTSL3P82987 1691 aa22.1■■□□□ 1.13
TUBE1-211ENST00000605457 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
TUBE1-211ENST00000605457 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.13
TUBE1-211ENST00000605457 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
TUBE1-211ENST00000605457 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
TUBE1-211ENST00000605457 RTEL1-TNFRSF6BF6WH68 1400 aa22.06■■□□□ 1.12
TUBE1-211ENST00000605457 RSPH4AQ5TD94 716 aa22.06■■□□□ 1.12
TUBE1-211ENST00000605457 MAST1Q9Y2H9 1570 aa22.05■■□□□ 1.12
TUBE1-211ENST00000605457 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
TUBE1-211ENST00000605457 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
TUBE1-211ENST00000605457 DNMT1P26358 1616 aaKnown RBP22.04■■□□□ 1.12
TUBE1-211ENST00000605457 MADDQ8WXG6 1647 aa22.03■■□□□ 1.12
TUBE1-211ENST00000605457 AGLP35573 1532 aa22.03■■□□□ 1.12
TUBE1-211ENST00000605457 FER1L4A9Z1Z3 1794 aa22.01■■□□□ 1.11
TUBE1-211ENST00000605457 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
TUBE1-211ENST00000605457 A2MP01023 1474 aa21.99■■□□□ 1.11
TUBE1-211ENST00000605457 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
TUBE1-211ENST00000605457 RIMS1Q86UR5 1692 aaKnown RBP21.97■■□□□ 1.11
TUBE1-211ENST00000605457 ABCC5O15440 1437 aa21.97■■□□□ 1.11
TUBE1-211ENST00000605457 DAPK1P53355 1430 aa21.97■■□□□ 1.11
TUBE1-211ENST00000605457 TSPY4P0CV99 314 aa21.96■■□□□ 1.11
TUBE1-211ENST00000605457 TSPY10P0CW01 314 aa21.96■■□□□ 1.11
TUBE1-211ENST00000605457 MLECQ14165 292 aa21.92■■□□□ 1.1
TUBE1-211ENST00000605457 PTPRMP28827 1452 aa21.91■■□□□ 1.1
TUBE1-211ENST00000605457 DHX29Q7Z478 1369 aaKnown RBP21.9■■□□□ 1.1
TUBE1-211ENST00000605457 FAM50AQ14320 339 aaKnown RBP21.9■■□□□ 1.1
TUBE1-211ENST00000605457 EIF2AK4Q9P2K8 1649 aaKnown RBP21.87■■□□□ 1.09
TUBE1-211ENST00000605457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.86■■□□□ 1.09
TUBE1-211ENST00000605457 RRBP1Q9P2E9 1410 aaKnown RBP21.85■■□□□ 1.09
TUBE1-211ENST00000605457 DUOX2Q9NRD8 1548 aa21.85■■□□□ 1.09
TUBE1-211ENST00000605457 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
TUBE1-211ENST00000605457 MROH2AA6NES4 1674 aa21.83■■□□□ 1.09
TUBE1-211ENST00000605457 KIF15Q9NS87 1388 aa21.83■■□□□ 1.08
TUBE1-211ENST00000605457 RNF17Q9BXT8 1623 aaKnown RBP21.82■■□□□ 1.08
TUBE1-211ENST00000605457 C3P01024 1663 aa21.81■■□□□ 1.08
TUBE1-211ENST00000605457 CLTCQ00610 1675 aaKnown RBP21.81■■□□□ 1.08
TUBE1-211ENST00000605457 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
TUBE1-211ENST00000605457 NCOA1Q15788 1441 aa21.8■■□□□ 1.08
TUBE1-211ENST00000605457 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
TUBE1-211ENST00000605457 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
TUBE1-211ENST00000605457 ERBINQ96RT1 1412 aa21.78■■□□□ 1.08
TUBE1-211ENST00000605457 CNTLNQ9NXG0 1405 aa21.78■■□□□ 1.08
TUBE1-211ENST00000605457 KIF3BO15066 747 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms