RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
FOCAD-213ENST00000604254 CFAP74Q9C0B2 1584 aa9.51□□□□□ -0.89
FOCAD-213ENST00000604254 TTC37Q6PGP7 1564 aa9.5□□□□□ -0.89
FOCAD-213ENST00000604254 CLIP1P30622 1438 aa9.5□□□□□ -0.89
FOCAD-213ENST00000604254 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
FOCAD-213ENST00000604254 KIF14Q15058 1648 aa9.49□□□□□ -0.89
FOCAD-213ENST00000604254 MYO5CQ9NQX4 1742 aa9.49□□□□□ -0.89
FOCAD-213ENST00000604254 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
FOCAD-213ENST00000604254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.49□□□□□ -0.89
FOCAD-213ENST00000604254 CCDC18Q5T9S5 1454 aa9.48□□□□□ -0.89
FOCAD-213ENST00000604254 FYCO1Q9BQS8 1478 aa9.48□□□□□ -0.89
FOCAD-213ENST00000604254 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
FOCAD-213ENST00000604254 CASKIN1Q8WXD9 1431 aa9.47□□□□□ -0.89
FOCAD-213ENST00000604254 NEO1Q92859 1461 aa9.46□□□□□ -0.9
FOCAD-213ENST00000604254 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.9
FOCAD-213ENST00000604254 CDK11AQ9UQ88 783 aaPredicted RBP9.44□□□□□ -0.9
FOCAD-213ENST00000604254 TROQ12816 1431 aaPredicted RBP9.44□□□□□ -0.9
FOCAD-213ENST00000604254 CEP162Q5TB80 1403 aa9.44□□□□□ -0.9
FOCAD-213ENST00000604254 FANCAO15360 1455 aa9.44□□□□□ -0.9
FOCAD-213ENST00000604254 RICTORQ6R327 1708 aa9.44□□□□□ -0.9
FOCAD-213ENST00000604254 ADAMTSL3P82987 1691 aa9.43□□□□□ -0.9
FOCAD-213ENST00000604254 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
FOCAD-213ENST00000604254 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
FOCAD-213ENST00000604254 LMTK3Q96Q04 1460 aa9.42□□□□□ -0.9
FOCAD-213ENST00000604254 RNF39Q9H2S5 420 aa9.42□□□□□ -0.9
FOCAD-213ENST00000604254 PREX2Q70Z35 1606 aa9.42□□□□□ -0.9
FOCAD-213ENST00000604254 ARHGAP5Q13017 1502 aa9.41□□□□□ -0.9
FOCAD-213ENST00000604254 CDC42BPAQ5VT25 1732 aa9.4□□□□□ -0.9
FOCAD-213ENST00000604254 CDC42BPBQ9Y5S2 1711 aa9.4□□□□□ -0.9
FOCAD-213ENST00000604254 SOCS7O14512 581 aa9.4□□□□□ -0.9
FOCAD-213ENST00000604254 ARHGEF40Q8TER5 1519 aa9.4□□□□□ -0.91
FOCAD-213ENST00000604254 DENND4BO75064 1496 aaPredicted RBP9.4□□□□□ -0.91
FOCAD-213ENST00000604254 PLCH2O75038 1416 aa9.39□□□□□ -0.91
FOCAD-213ENST00000604254 AKNAQ7Z591 1439 aa9.39□□□□□ -0.91
FOCAD-213ENST00000604254 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
FOCAD-213ENST00000604254 PTPRMP28827 1452 aa9.38□□□□□ -0.91
FOCAD-213ENST00000604254 EHBP1L1Q8N3D4 1523 aa9.37□□□□□ -0.91
FOCAD-213ENST00000604254 ITSN2Q9NZM3 1697 aa9.36□□□□□ -0.91
FOCAD-213ENST00000604254 RAPGEF3O95398 923 aa9.36□□□□□ -0.91
FOCAD-213ENST00000604254 ZFYVE16Q7Z3T8 1539 aa9.36□□□□□ -0.91
FOCAD-213ENST00000604254 LOC105371045A0A1W2PR82 267 aa9.35□□□□□ -0.91
FOCAD-213ENST00000604254 BCORL1Q5H9F3 1711 aa9.35□□□□□ -0.91
FOCAD-213ENST00000604254 POGZQ7Z3K3 1410 aa9.35□□□□□ -0.91
FOCAD-213ENST00000604254 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
FOCAD-213ENST00000604254 ABCC1P33527 1531 aa9.35□□□□□ -0.91
FOCAD-213ENST00000604254 MTUS2Q5JR59 1369 aa9.35□□□□□ -0.91
FOCAD-213ENST00000604254 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.91
FOCAD-213ENST00000604254 SCAPERQ9BY12 1400 aa9.34□□□□□ -0.91
FOCAD-213ENST00000604254 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
FOCAD-213ENST00000604254 ZNF518AQ6AHZ1 1483 aa9.34□□□□□ -0.91
FOCAD-213ENST00000604254 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
FOCAD-213ENST00000604254 VPS8Q8N3P4 1428 aa9.33□□□□□ -0.92
FOCAD-213ENST00000604254 MAGI2Q86UL8 1455 aa9.33□□□□□ -0.92
FOCAD-213ENST00000604254 KDM5CP41229 1560 aa9.33□□□□□ -0.92
FOCAD-213ENST00000604254 SAMD9LQ8IVG5 1584 aa9.33□□□□□ -0.92
FOCAD-213ENST00000604254 ILDR2Q71H61 639 aa9.32□□□□□ -0.92
FOCAD-213ENST00000604254 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
FOCAD-213ENST00000604254 SETD1BQ9UPS6 1966 aaKnown RBP9.32□□□□□ -0.92
FOCAD-213ENST00000604254 SIGLEC1Q9BZZ2 1709 aa9.31□□□□□ -0.92
FOCAD-213ENST00000604254 SYCP2Q9BX26 1530 aa9.31□□□□□ -0.92
FOCAD-213ENST00000604254 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
FOCAD-213ENST00000604254 MADDQ8WXG6 1647 aa9.3□□□□□ -0.92
FOCAD-213ENST00000604254 GPATCH8Q9UKJ3 1502 aaKnown RBP9.3□□□□□ -0.92
FOCAD-213ENST00000604254 YEATS2Q9ULM3 1422 aa9.3□□□□□ -0.92
FOCAD-213ENST00000604254 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
FOCAD-213ENST00000604254 FER1L4A9Z1Z3 1794 aa9.29□□□□□ -0.92
FOCAD-213ENST00000604254 RIMS1Q86UR5 1692 aaKnown RBP9.29□□□□□ -0.92
FOCAD-213ENST00000604254 SAMD1Q6SPF0 538 aaPredicted RBP9.29□□□□□ -0.92
FOCAD-213ENST00000604254 ABCA6Q8N139 1617 aa9.29□□□□□ -0.92
FOCAD-213ENST00000604254 DIP2CQ9Y2E4 1556 aa9.29□□□□□ -0.92
FOCAD-213ENST00000604254 SPINK5Q9NQ38 1064 aaPredicted RBP9.28□□□□□ -0.92
FOCAD-213ENST00000604254 C9orf84Q5VXU9 1444 aa9.28□□□□□ -0.92
FOCAD-213ENST00000604254 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
FOCAD-213ENST00000604254 KIDINS220Q9ULH0 1771 aa9.27□□□□□ -0.92
FOCAD-213ENST00000604254 DISP3Q9P2K9 1392 aa9.27□□□□□ -0.93
FOCAD-213ENST00000604254 ARHGEF12Q9NZN5 1544 aa9.27□□□□□ -0.93
FOCAD-213ENST00000604254 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
FOCAD-213ENST00000604254 ZNF777Q9ULD5 760 aaPredicted RBP9.27□□□□□ -0.93
FOCAD-213ENST00000604254 ATP10AO60312 1499 aa9.27□□□□□ -0.93
FOCAD-213ENST00000604254 NCOA2Q15596 1464 aa9.27□□□□□ -0.93
FOCAD-213ENST00000604254 MAP3K1Q13233 1512 aa9.26□□□□□ -0.93
FOCAD-213ENST00000604254 TRAPPC8Q9Y2L5 1435 aa9.26□□□□□ -0.93
FOCAD-213ENST00000604254 ATXN8OSP0DMR3 200 aa9.26□□□□□ -0.93
FOCAD-213ENST00000604254 LRRC9Q6ZRR7 1453 aa9.26□□□□□ -0.93
FOCAD-213ENST00000604254 MLH3Q9UHC1 1453 aa9.26□□□□□ -0.93
FOCAD-213ENST00000604254 REREQ9P2R6 1566 aa9.25□□□□□ -0.93
FOCAD-213ENST00000604254 INO80Q9ULG1 1556 aaPredicted RBP9.25□□□□□ -0.93
FOCAD-213ENST00000604254 C1QBPQ07021 282 aaKnown RBP9.25□□□□□ -0.93
FOCAD-213ENST00000604254 AFAP1Q8N556 730 aa9.25□□□□□ -0.93
FOCAD-213ENST00000604254 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
FOCAD-213ENST00000604254 ATP7AQ04656 1500 aa9.25□□□□□ -0.93
FOCAD-213ENST00000604254 KIAA1107Q9UPP5 1409 aa9.23□□□□□ -0.93
FOCAD-213ENST00000604254 ADGBQ8N7X0 1667 aa9.23□□□□□ -0.93
FOCAD-213ENST00000604254 CAMSAP2Q08AD1 1489 aa9.23□□□□□ -0.93
FOCAD-213ENST00000604254 STRCQ7RTU9 1775 aa9.22□□□□□ -0.93
FOCAD-213ENST00000604254 HNRNPMP52272 730 aaKnown RBP eCLIP9.21□□□□□ -0.94
FOCAD-213ENST00000604254 HSPA2P54652 639 aa9.21□□□□□ -0.94
FOCAD-213ENST00000604254 APLP2Q06481 763 aa9.21□□□□□ -0.94
FOCAD-213ENST00000604254 SPAG9O60271 1321 aaKnown RBP9.21□□□□□ -0.94
FOCAD-213ENST00000604254 AGLP35573 1532 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms