RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 MAGI2Q86UL8 1455 aa18.32■□□□□ 0.52
CCDC12-209ENST00000604164 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
CCDC12-209ENST00000604164 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
CCDC12-209ENST00000604164 POGZQ7Z3K3 1410 aa18.31■□□□□ 0.52
CCDC12-209ENST00000604164 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
CCDC12-209ENST00000604164 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
CCDC12-209ENST00000604164 EHBP1L1Q8N3D4 1523 aa18.28■□□□□ 0.52
CCDC12-209ENST00000604164 ZNF518AQ6AHZ1 1483 aa18.28■□□□□ 0.52
CCDC12-209ENST00000604164 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
CCDC12-209ENST00000604164 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
CCDC12-209ENST00000604164 ZFYVE16Q7Z3T8 1539 aa18.25■□□□□ 0.51
CCDC12-209ENST00000604164 CDC42BPBQ9Y5S2 1711 aa18.25■□□□□ 0.51
CCDC12-209ENST00000604164 ARID4BQ4LE39 1312 aaPredicted RBP18.24■□□□□ 0.51
CCDC12-209ENST00000604164 CFDP1Q9UEE9 299 aaPredicted RBP18.24■□□□□ 0.51
CCDC12-209ENST00000604164 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
CCDC12-209ENST00000604164 CDC42BPAQ5VT25 1732 aa18.23■□□□□ 0.51
CCDC12-209ENST00000604164 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
CCDC12-209ENST00000604164 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
CCDC12-209ENST00000604164 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
CCDC12-209ENST00000604164 ABCC1P33527 1531 aa18.21■□□□□ 0.51
CCDC12-209ENST00000604164 MAP3K1Q13233 1512 aa18.21■□□□□ 0.51
CCDC12-209ENST00000604164 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
CCDC12-209ENST00000604164 APLP2Q06481 763 aa18.2■□□□□ 0.5
CCDC12-209ENST00000604164 AFAP1Q8N556 730 aa18.2■□□□□ 0.5
CCDC12-209ENST00000604164 KDM5CP41229 1560 aa18.19■□□□□ 0.5
CCDC12-209ENST00000604164 YEATS2Q9ULM3 1422 aa18.18■□□□□ 0.5
CCDC12-209ENST00000604164 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
CCDC12-209ENST00000604164 ATP10AO60312 1499 aa18.18■□□□□ 0.5
CCDC12-209ENST00000604164 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
CCDC12-209ENST00000604164 ITSN2Q9NZM3 1697 aa18.17■□□□□ 0.5
CCDC12-209ENST00000604164 C9orf84Q5VXU9 1444 aa18.16■□□□□ 0.5
CCDC12-209ENST00000604164 MLH3Q9UHC1 1453 aa18.16■□□□□ 0.5
CCDC12-209ENST00000604164 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
CCDC12-209ENST00000604164 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
CCDC12-209ENST00000604164 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
CCDC12-209ENST00000604164 NCOA2Q15596 1464 aa18.14■□□□□ 0.5
CCDC12-209ENST00000604164 SAMD9LQ8IVG5 1584 aa18.14■□□□□ 0.49
CCDC12-209ENST00000604164 ARHGEF12Q9NZN5 1544 aa18.13■□□□□ 0.49
CCDC12-209ENST00000604164 BCORL1Q5H9F3 1711 aa18.12■□□□□ 0.49
CCDC12-209ENST00000604164 SYCP2Q9BX26 1530 aa18.12■□□□□ 0.49
CCDC12-209ENST00000604164 ADAMTSL3P82987 1691 aa18.12■□□□□ 0.49
CCDC12-209ENST00000604164 HNRNPMP52272 730 aaKnown RBP eCLIP18.11■□□□□ 0.493e-6■■□□□ 12.2
CCDC12-209ENST00000604164 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
CCDC12-209ENST00000604164 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
CCDC12-209ENST00000604164 REREQ9P2R6 1566 aa18.08■□□□□ 0.49
CCDC12-209ENST00000604164 DIP2CQ9Y2E4 1556 aa18.07■□□□□ 0.48
CCDC12-209ENST00000604164 PTPRMP28827 1452 aa18.07■□□□□ 0.48
CCDC12-209ENST00000604164 KANK4Q5T7N3 995 aaPredicted RBP18.06■□□□□ 0.48
CCDC12-209ENST00000604164 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
CCDC12-209ENST00000604164 MLECQ14165 292 aa18.04■□□□□ 0.48
CCDC12-209ENST00000604164 ABCA6Q8N139 1617 aa18.04■□□□□ 0.48
CCDC12-209ENST00000604164 MADDQ8WXG6 1647 aa18.04■□□□□ 0.48
CCDC12-209ENST00000604164 AGLP35573 1532 aa18.03■□□□□ 0.48
CCDC12-209ENST00000604164 KIDINS220Q9ULH0 1771 aa18.03■□□□□ 0.48
CCDC12-209ENST00000604164 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
CCDC12-209ENST00000604164 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.48
CCDC12-209ENST00000604164 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
CCDC12-209ENST00000604164 MIA2Q96PC5 1412 aa18.02■□□□□ 0.48
CCDC12-209ENST00000604164 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
CCDC12-209ENST00000604164 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
CCDC12-209ENST00000604164 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
CCDC12-209ENST00000604164 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
CCDC12-209ENST00000604164 SIGLEC1Q9BZZ2 1709 aa18■□□□□ 0.47
CCDC12-209ENST00000604164 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
CCDC12-209ENST00000604164 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
CCDC12-209ENST00000604164 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
CCDC12-209ENST00000604164 RIMS1Q86UR5 1692 aaKnown RBP17.99■□□□□ 0.47
CCDC12-209ENST00000604164 FER1L4A9Z1Z3 1794 aa17.97■□□□□ 0.47
CCDC12-209ENST00000604164 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
CCDC12-209ENST00000604164 A2MP01023 1474 aa17.96■□□□□ 0.47
CCDC12-209ENST00000604164 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
CCDC12-209ENST00000604164 CNTLNQ9NXG0 1405 aa17.94■□□□□ 0.46
CCDC12-209ENST00000604164 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
CCDC12-209ENST00000604164 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
CCDC12-209ENST00000604164 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
CCDC12-209ENST00000604164 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
CCDC12-209ENST00000604164 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
CCDC12-209ENST00000604164 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
CCDC12-209ENST00000604164 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
CCDC12-209ENST00000604164 GGT6Q6P531 493 aa17.86■□□□□ 0.45
CCDC12-209ENST00000604164 TCOF1Q13428 1488 aaKnown RBP17.84■□□□□ 0.45
CCDC12-209ENST00000604164 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
CCDC12-209ENST00000604164 KIF3BO15066 747 aa17.83■□□□□ 0.44
CCDC12-209ENST00000604164 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
CCDC12-209ENST00000604164 LMTK3Q96Q04 1460 aa17.82■□□□□ 0.44
CCDC12-209ENST00000604164 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
CCDC12-209ENST00000604164 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
CCDC12-209ENST00000604164 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
CCDC12-209ENST00000604164 ABCC5O15440 1437 aa17.8■□□□□ 0.44
CCDC12-209ENST00000604164 DAPK1P53355 1430 aa17.8■□□□□ 0.44
CCDC12-209ENST00000604164 C3P01024 1663 aa17.79■□□□□ 0.44
CCDC12-209ENST00000604164 NPATQ14207 1427 aa17.79■□□□□ 0.44
CCDC12-209ENST00000604164 UHRF1BP1Q6BDS2 1440 aa17.79■□□□□ 0.44
CCDC12-209ENST00000604164 SETD1BQ9UPS6 1966 aaKnown RBP17.79■□□□□ 0.44
CCDC12-209ENST00000604164 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
CCDC12-209ENST00000604164 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
CCDC12-209ENST00000604164 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
CCDC12-209ENST00000604164 PREX1Q8TCU6 1659 aa17.77■□□□□ 0.44
CCDC12-209ENST00000604164 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.43
CCDC12-209ENST00000604164 CROCC2H7BZ55 1655 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms