RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 CCDC18Q5T9S5 1454 aa35.54■■■■□ 3.28
UBE2E3-206ENST00000602479 CLIP1P30622 1438 aa35.53■■■■□ 3.28
UBE2E3-206ENST00000602479 POGZQ7Z3K3 1410 aa35.53■■■■□ 3.28
UBE2E3-206ENST00000602479 CDC42BPBQ9Y5S2 1711 aa35.52■■■■□ 3.28
UBE2E3-206ENST00000602479 FYCO1Q9BQS8 1478 aa35.5■■■■□ 3.27
UBE2E3-206ENST00000602479 SCAPERQ9BY12 1400 aa35.49■■■■□ 3.27
UBE2E3-206ENST00000602479 PTPRMP28827 1452 aa35.49■■■■□ 3.27
UBE2E3-206ENST00000602479 MAGI2Q86UL8 1455 aa35.49■■■■□ 3.27
UBE2E3-206ENST00000602479 PREX2Q70Z35 1606 aa35.48■■■■□ 3.27
UBE2E3-206ENST00000602479 YEATS2Q9ULM3 1422 aa35.48■■■■□ 3.27
UBE2E3-206ENST00000602479 ARHGAP5Q13017 1502 aa35.47■■■■□ 3.27
UBE2E3-206ENST00000602479 RIMS1Q86UR5 1692 aaKnown RBP35.45■■■■□ 3.27
UBE2E3-206ENST00000602479 ARID4BQ4LE39 1312 aaPredicted RBP35.42■■■■□ 3.26
UBE2E3-206ENST00000602479 EFCAB2Q5VUJ9 269 aa35.42■■■■□ 3.26
UBE2E3-206ENST00000602479 CDC42BPAQ5VT25 1732 aa35.42■■■■□ 3.26
UBE2E3-206ENST00000602479 KDM5CP41229 1560 aa35.38■■■■□ 3.25
UBE2E3-206ENST00000602479 ZNF518AQ6AHZ1 1483 aa35.35■■■■□ 3.25
UBE2E3-206ENST00000602479 FER1L4A9Z1Z3 1794 aa35.35■■■■□ 3.25
UBE2E3-206ENST00000602479 ITSN2Q9NZM3 1697 aa35.33■■■■□ 3.25
UBE2E3-206ENST00000602479 ABCC1P33527 1531 aa35.31■■■■□ 3.24
UBE2E3-206ENST00000602479 ATP10AO60312 1499 aa35.28■■■■□ 3.24
UBE2E3-206ENST00000602479 C9orf84Q5VXU9 1444 aa35.26■■■■□ 3.24
UBE2E3-206ENST00000602479 DIP2CQ9Y2E4 1556 aa35.24■■■■□ 3.23
UBE2E3-206ENST00000602479 ABCA6Q8N139 1617 aa35.23■■■■□ 3.23
UBE2E3-206ENST00000602479 ARHGEF12Q9NZN5 1544 aa35.22■■■■□ 3.23
UBE2E3-206ENST00000602479 REREQ9P2R6 1566 aa35.18■■■■□ 3.22
UBE2E3-206ENST00000602479 AFAP1Q8N556 730 aa35.18■■■■□ 3.22
UBE2E3-206ENST00000602479 SAMD9LQ8IVG5 1584 aa35.17■■■■□ 3.22
UBE2E3-206ENST00000602479 LMTK3Q96Q04 1460 aa35.16■■■■□ 3.22
UBE2E3-206ENST00000602479 MLH3Q9UHC1 1453 aa35.16■■■■□ 3.22
UBE2E3-206ENST00000602479 KIDINS220Q9ULH0 1771 aa35.15■■■■□ 3.22
UBE2E3-206ENST00000602479 TRAPPC8Q9Y2L5 1435 aa35.15■■■■□ 3.22
UBE2E3-206ENST00000602479 CEP162Q5TB80 1403 aa35.14■■■■□ 3.22
UBE2E3-206ENST00000602479 GPATCH8Q9UKJ3 1502 aaKnown RBP35.11■■■■□ 3.21
UBE2E3-206ENST00000602479 MLECQ14165 292 aa35.1■■■■□ 3.21
UBE2E3-206ENST00000602479 SYCP2Q9BX26 1530 aa35.08■■■■□ 3.21
UBE2E3-206ENST00000602479 EHBP1L1Q8N3D4 1523 aa35.04■■■■□ 3.2
UBE2E3-206ENST00000602479 MTUS2Q5JR59 1369 aa35.02■■■■□ 3.2
UBE2E3-206ENST00000602479 TIAM1Q13009 1591 aa35.02■■■■□ 3.2
UBE2E3-206ENST00000602479 AGLP35573 1532 aa35.01■■■■□ 3.19
UBE2E3-206ENST00000602479 MYT1LQ9UL68 1186 aa35■■■■□ 3.19
UBE2E3-206ENST00000602479 PREX1Q8TCU6 1659 aa35■■■■□ 3.19
UBE2E3-206ENST00000602479 INO80Q9ULG1 1556 aaPredicted RBP34.96■■■■□ 3.19
UBE2E3-206ENST00000602479 PLPPR3Q6T4P5 718 aa34.96■■■■□ 3.19
UBE2E3-206ENST00000602479 CCNB3Q8WWL7 1395 aa34.96■■■■□ 3.19
UBE2E3-206ENST00000602479 ZNF777Q9ULD5 760 aaPredicted RBP34.95■■■■□ 3.19
UBE2E3-206ENST00000602479 PLEKHH2Q8IVE3 1493 aa34.94■■■■□ 3.18
UBE2E3-206ENST00000602479 C3P01024 1663 aa34.93■■■■□ 3.18
UBE2E3-206ENST00000602479 ILDR1Q86SU0 546 aaPredicted RBP34.93■■■■□ 3.18
UBE2E3-206ENST00000602479 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
UBE2E3-206ENST00000602479 ATP7AQ04656 1500 aa34.91■■■■□ 3.18
UBE2E3-206ENST00000602479 CFDP1Q9UEE9 299 aaPredicted RBP34.89■■■■□ 3.18
UBE2E3-206ENST00000602479 SUPT6HQ7KZ85 1726 aaKnown RBP34.89■■■■□ 3.18
UBE2E3-206ENST00000602479 SETD1BQ9UPS6 1966 aaKnown RBP34.87■■■■□ 3.17
UBE2E3-206ENST00000602479 HNRNPMP52272 730 aaKnown RBP eCLIP34.85■■■■□ 3.177e-8■■■■□ 26.6
UBE2E3-206ENST00000602479 PLXNC1O60486 1568 aa34.84■■■■□ 3.17
UBE2E3-206ENST00000602479 HSPA2P54652 639 aa34.83■■■■□ 3.17
UBE2E3-206ENST00000602479 SPAG9O60271 1321 aaKnown RBP34.82■■■■□ 3.17
UBE2E3-206ENST00000602479 ADGBQ8N7X0 1667 aa34.82■■■■□ 3.16
UBE2E3-206ENST00000602479 CEBPAP49715 358 aaPredicted RBP34.81■■■■□ 3.16
UBE2E3-206ENST00000602479 MROH2AA6NES4 1674 aa34.81■■■■□ 3.16
UBE2E3-206ENST00000602479 NCOA2Q15596 1464 aa34.77■■■■□ 3.16
UBE2E3-206ENST00000602479 VPS8Q8N3P4 1428 aa34.76■■■■□ 3.16
UBE2E3-206ENST00000602479 LOC105371045A0A1W2PR82 267 aa34.75■■■■□ 3.15
UBE2E3-206ENST00000602479 MBD5Q9P267 1494 aa34.75■■■■□ 3.15
UBE2E3-206ENST00000602479 ZNF644Q9H582 1327 aaPredicted RBP34.74■■■■□ 3.15
UBE2E3-206ENST00000602479 CNTLNQ9NXG0 1405 aa34.72■■■■□ 3.15
UBE2E3-206ENST00000602479 A2MP01023 1474 aa34.72■■■■□ 3.15
UBE2E3-206ENST00000602479 STRCQ7RTU9 1775 aa34.71■■■■□ 3.15
UBE2E3-206ENST00000602479 CLTCQ00610 1675 aaKnown RBP34.7■■■■□ 3.15
UBE2E3-206ENST00000602479 UHRF1BP1Q6BDS2 1440 aa34.69■■■■□ 3.14
UBE2E3-206ENST00000602479 CAMSAP2Q08AD1 1489 aa34.68■■■■□ 3.14
UBE2E3-206ENST00000602479 ESF1Q9H501 851 aaKnown RBP34.65■■■■□ 3.14
UBE2E3-206ENST00000602479 LRRC9Q6ZRR7 1453 aa34.65■■■■□ 3.14
UBE2E3-206ENST00000602479 RTEL1-TNFRSF6BF6WH68 1400 aa34.62■■■■□ 3.13
UBE2E3-206ENST00000602479 MAP3K1Q13233 1512 aa34.61■■■■□ 3.13
UBE2E3-206ENST00000602479 CCDC141Q6ZP82 1450 aa34.61■■■■□ 3.13
UBE2E3-206ENST00000602479 ARHGEF5Q12774 1597 aa34.59■■■■□ 3.13
UBE2E3-206ENST00000602479 NPATQ14207 1427 aa34.55■■■■□ 3.12
UBE2E3-206ENST00000602479 FBXO41Q8TF61 875 aa34.54■■■■□ 3.12
UBE2E3-206ENST00000602479 ZMYM3Q14202 1370 aa34.51■■■■□ 3.12
UBE2E3-206ENST00000602479 ZNF142P52746 1687 aaPredicted RBP34.51■■■■□ 3.12
UBE2E3-206ENST00000602479 MYO3AQ8NEV4 1616 aa34.51■■■■□ 3.11
UBE2E3-206ENST00000602479 DHX29Q7Z478 1369 aaKnown RBP34.47■■■■□ 3.11
UBE2E3-206ENST00000602479 GGT6Q6P531 493 aa34.44■■■■□ 3.1
UBE2E3-206ENST00000602479 MAST1Q9Y2H9 1570 aa34.44■■■■□ 3.1
UBE2E3-206ENST00000602479 RSPH4AQ5TD94 716 aa34.43■■■■□ 3.1
UBE2E3-206ENST00000602479 KANK4Q5T7N3 995 aaPredicted RBP34.42■■■■□ 3.1
UBE2E3-206ENST00000602479 PTPRKQ15262 1439 aa34.41■■■■□ 3.1
UBE2E3-206ENST00000602479 FAM135AQ9P2D6 1515 aa34.4■■■■□ 3.1
UBE2E3-206ENST00000602479 NCOA1Q15788 1441 aa34.39■■■■□ 3.1
UBE2E3-206ENST00000602479 MYOM3Q5VTT5 1437 aa34.39■■■■□ 3.1
UBE2E3-206ENST00000602479 PPP6R1Q9UPN7 881 aa34.39■■■■□ 3.1
UBE2E3-206ENST00000602479 CAMSAP1Q5T5Y3 1602 aa34.39■■■■□ 3.1
UBE2E3-206ENST00000602479 CEP170BQ9Y4F5 1589 aaPredicted RBP34.38■■■■□ 3.09
UBE2E3-206ENST00000602479 DMRT2Q9Y5R5 561 aa34.37■■■■□ 3.09
UBE2E3-206ENST00000602479 KDM5DQ9BY66 1539 aa34.36■■■■□ 3.09
UBE2E3-206ENST00000602479 PTPRTO14522 1441 aa34.36■■■■□ 3.09
UBE2E3-206ENST00000602479 MIA2Q96PC5 1412 aa34.36■■■■□ 3.09
UBE2E3-206ENST00000602479 CROCC2H7BZ55 1655 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms