RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 MADDQ8WXG6 1647 aa38.13■■■■□ 3.69
GTPBP3-227ENST00000602056 ZFYVE16Q7Z3T8 1539 aa38.12■■■■□ 3.69
GTPBP3-227ENST00000602056 MAGI2Q86UL8 1455 aa38.12■■■■□ 3.69
GTPBP3-227ENST00000602056 LRRIQ1Q96JM4 1722 aa38.05■■■■□ 3.68
GTPBP3-227ENST00000602056 SIGLEC1Q9BZZ2 1709 aa38.05■■■■□ 3.68
GTPBP3-227ENST00000602056 CASKIN1Q8WXD9 1431 aa38.04■■■■□ 3.68
GTPBP3-227ENST00000602056 CLIP1P30622 1438 aa38.04■■■■□ 3.68
GTPBP3-227ENST00000602056 MYO5CQ9NQX4 1742 aa38.01■■■■□ 3.67
GTPBP3-227ENST00000602056 PCF11O94913 1555 aaKnown RBP38■■■■□ 3.67
GTPBP3-227ENST00000602056 ARHGAP5Q13017 1502 aa37.97■■■■□ 3.67
GTPBP3-227ENST00000602056 RIMS1Q86UR5 1692 aaKnown RBP37.95■■■■□ 3.67
GTPBP3-227ENST00000602056 MLECQ14165 292 aa37.95■■■■□ 3.67
GTPBP3-227ENST00000602056 AFAP1Q8N556 730 aa37.95■■■■□ 3.67
GTPBP3-227ENST00000602056 ATP10AO60312 1499 aa37.94■■■■□ 3.66
GTPBP3-227ENST00000602056 CCDC18Q5T9S5 1454 aa37.93■■■■□ 3.66
GTPBP3-227ENST00000602056 LMTK3Q96Q04 1460 aa37.92■■■■□ 3.66
GTPBP3-227ENST00000602056 ZNF518AQ6AHZ1 1483 aa37.9■■■■□ 3.66
GTPBP3-227ENST00000602056 C9orf84Q5VXU9 1444 aa37.88■■■■□ 3.66
GTPBP3-227ENST00000602056 PLPPR3Q6T4P5 718 aa37.87■■■■□ 3.65
GTPBP3-227ENST00000602056 KDM5CP41229 1560 aa37.85■■■■□ 3.65
GTPBP3-227ENST00000602056 FYCO1Q9BQS8 1478 aa37.85■■■■□ 3.65
GTPBP3-227ENST00000602056 ARHGEF12Q9NZN5 1544 aa37.82■■■■□ 3.64
GTPBP3-227ENST00000602056 CDC42BPBQ9Y5S2 1711 aa37.81■■■■□ 3.64
GTPBP3-227ENST00000602056 TRAPPC8Q9Y2L5 1435 aa37.79■■■■□ 3.64
GTPBP3-227ENST00000602056 PREX2Q70Z35 1606 aa37.76■■■■□ 3.64
GTPBP3-227ENST00000602056 HSPA2P54652 639 aa37.76■■■■□ 3.64
GTPBP3-227ENST00000602056 ABCC1P33527 1531 aa37.74■■■■□ 3.63
GTPBP3-227ENST00000602056 MLH3Q9UHC1 1453 aa37.73■■■■□ 3.63
GTPBP3-227ENST00000602056 MYT1LQ9UL68 1186 aa37.73■■■■□ 3.63
GTPBP3-227ENST00000602056 DIP2CQ9Y2E4 1556 aa37.72■■■■□ 3.63
GTPBP3-227ENST00000602056 FER1L4A9Z1Z3 1794 aa37.7■■■■□ 3.63
GTPBP3-227ENST00000602056 CEBPAP49715 358 aaPredicted RBP37.67■■■■□ 3.62
GTPBP3-227ENST00000602056 GPATCH8Q9UKJ3 1502 aaKnown RBP37.65■■■■□ 3.62
GTPBP3-227ENST00000602056 ABCA6Q8N139 1617 aa37.64■■■■□ 3.62
GTPBP3-227ENST00000602056 REREQ9P2R6 1566 aa37.63■■■■□ 3.62
GTPBP3-227ENST00000602056 CDC42BPAQ5VT25 1732 aa37.63■■■■□ 3.61
GTPBP3-227ENST00000602056 ZNF777Q9ULD5 760 aaPredicted RBP37.62■■■■□ 3.61
GTPBP3-227ENST00000602056 ITSN2Q9NZM3 1697 aa37.61■■■■□ 3.61
GTPBP3-227ENST00000602056 AGLP35573 1532 aa37.56■■■■□ 3.6
GTPBP3-227ENST00000602056 SAMD9LQ8IVG5 1584 aa37.55■■■■□ 3.6
GTPBP3-227ENST00000602056 FBXO41Q8TF61 875 aa37.55■■■■□ 3.6
GTPBP3-227ENST00000602056 HNRNPMP52272 730 aaKnown RBP eCLIP37.54■■■■□ 3.6
GTPBP3-227ENST00000602056 KIDINS220Q9ULH0 1771 aa37.52■■■■□ 3.6
GTPBP3-227ENST00000602056 CFDP1Q9UEE9 299 aaPredicted RBP37.51■■■■□ 3.6
GTPBP3-227ENST00000602056 SYCP2Q9BX26 1530 aa37.51■■■■□ 3.59
GTPBP3-227ENST00000602056 MTUS2Q5JR59 1369 aa37.5■■■■□ 3.59
GTPBP3-227ENST00000602056 CCNB3Q8WWL7 1395 aa37.49■■■■□ 3.59
GTPBP3-227ENST00000602056 CEP162Q5TB80 1403 aa37.47■■■■□ 3.59
GTPBP3-227ENST00000602056 KIAA1107Q9UPP5 1409 aa37.46■■■■□ 3.59
GTPBP3-227ENST00000602056 SPAG9O60271 1321 aaKnown RBP37.46■■■■□ 3.59
GTPBP3-227ENST00000602056 PLEKHH2Q8IVE3 1493 aa37.39■■■■□ 3.58
GTPBP3-227ENST00000602056 PREX1Q8TCU6 1659 aa37.39■■■■□ 3.58
GTPBP3-227ENST00000602056 ZNF644Q9H582 1327 aaPredicted RBP37.38■■■■□ 3.58
GTPBP3-227ENST00000602056 ESF1Q9H501 851 aaKnown RBP37.36■■■■□ 3.57
GTPBP3-227ENST00000602056 UHRF1BP1Q6BDS2 1440 aa37.36■■■■□ 3.57
GTPBP3-227ENST00000602056 TIAM1Q13009 1591 aa37.33■■■■□ 3.57
GTPBP3-227ENST00000602056 ATP7AQ04656 1500 aa37.32■■■■□ 3.57
GTPBP3-227ENST00000602056 EHBP1L1Q8N3D4 1523 aa37.32■■■■□ 3.57
GTPBP3-227ENST00000602056 C3P01024 1663 aa37.31■■■■□ 3.56
GTPBP3-227ENST00000602056 CNTLNQ9NXG0 1405 aa37.31■■■■□ 3.56
GTPBP3-227ENST00000602056 INO80Q9ULG1 1556 aaPredicted RBP37.29■■■■□ 3.56
GTPBP3-227ENST00000602056 MBD5Q9P267 1494 aa37.28■■■■□ 3.56
GTPBP3-227ENST00000602056 A2MP01023 1474 aa37.26■■■■□ 3.56
GTPBP3-227ENST00000602056 SETD1BQ9UPS6 1966 aaKnown RBP37.24■■■■□ 3.55
GTPBP3-227ENST00000602056 LOC105371045A0A1W2PR82 267 aa37.24■■■■□ 3.55
GTPBP3-227ENST00000602056 CERKQ8TCT0 537 aa37.24■■■■□ 3.55
GTPBP3-227ENST00000602056 PLXNC1O60486 1568 aa37.24■■■■□ 3.55
GTPBP3-227ENST00000602056 ZMYM3Q14202 1370 aa37.22■■■■□ 3.55
GTPBP3-227ENST00000602056 STRCQ7RTU9 1775 aa37.2■■■■□ 3.55
GTPBP3-227ENST00000602056 SUPT6HQ7KZ85 1726 aaKnown RBP37.19■■■■□ 3.54
GTPBP3-227ENST00000602056 DMRT2Q9Y5R5 561 aa37.17■■■■□ 3.54
GTPBP3-227ENST00000602056 NCOA2Q15596 1464 aa37.17■■■■□ 3.54
GTPBP3-227ENST00000602056 NPATQ14207 1427 aa37.14■■■■□ 3.54
GTPBP3-227ENST00000602056 GGT6Q6P531 493 aa37.14■■■■□ 3.54
GTPBP3-227ENST00000602056 RTEL1-TNFRSF6BF6WH68 1400 aa37.12■■■■□ 3.53
GTPBP3-227ENST00000602056 MROH2AA6NES4 1674 aa37.1■■■■□ 3.53
GTPBP3-227ENST00000602056 VPS8Q8N3P4 1428 aa37.08■■■■□ 3.53
GTPBP3-227ENST00000602056 PTPRTO14522 1441 aa37.07■■■■□ 3.52
GTPBP3-227ENST00000602056 DHX29Q7Z478 1369 aaKnown RBP37.05■■■■□ 3.52
GTPBP3-227ENST00000602056 NCOA1Q15788 1441 aa37.05■■■■□ 3.52
GTPBP3-227ENST00000602056 CAMSAP2Q08AD1 1489 aa37.05■■■■□ 3.52
GTPBP3-227ENST00000602056 PTPRKQ15262 1439 aa37.04■■■■□ 3.52
GTPBP3-227ENST00000602056 CLTCQ00610 1675 aaKnown RBP37.03■■■■□ 3.52
GTPBP3-227ENST00000602056 CCDC141Q6ZP82 1450 aa37.03■■■■□ 3.52
GTPBP3-227ENST00000602056 PPP6R1Q9UPN7 881 aa37.03■■■■□ 3.52
GTPBP3-227ENST00000602056 ADGBQ8N7X0 1667 aa37.02■■■■□ 3.52
GTPBP3-227ENST00000602056 LRRC9Q6ZRR7 1453 aa37■■■■□ 3.51
GTPBP3-227ENST00000602056 RSPH4AQ5TD94 716 aa36.99■■■■□ 3.51
GTPBP3-227ENST00000602056 KANK4Q5T7N3 995 aaPredicted RBP36.96■■■■□ 3.51
GTPBP3-227ENST00000602056 KIF3BO15066 747 aa36.94■■■■□ 3.5
GTPBP3-227ENST00000602056 CAMSAP1Q5T5Y3 1602 aa36.94■■■■□ 3.5
GTPBP3-227ENST00000602056 NCKAP5LQ9HCH0 1330 aa36.9■■■■□ 3.5
GTPBP3-227ENST00000602056 ARHGEF5Q12774 1597 aa36.87■■■■□ 3.49
GTPBP3-227ENST00000602056 MYO3AQ8NEV4 1616 aa36.87■■■■□ 3.49
GTPBP3-227ENST00000602056 MAP3K1Q13233 1512 aa36.85■■■■□ 3.49
GTPBP3-227ENST00000602056 LTBP4Q8N2S1 1624 aa36.85■■■■□ 3.49
GTPBP3-227ENST00000602056 TSPY4P0CV99 314 aa36.84■■■■□ 3.49
GTPBP3-227ENST00000602056 TSPY10P0CW01 314 aa36.84■■■■□ 3.49
GTPBP3-227ENST00000602056 CEP170BQ9Y4F5 1589 aaPredicted RBP36.83■■■■□ 3.49
GTPBP3-227ENST00000602056 FBXO31Q5XUX0 539 aaPredicted RBP36.83■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms