RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ABCC9O60706 1549 aa15.33■□□□□ 0.05
SHANK2-218ENST00000601538 RSF1Q96T23 1441 aaPredicted RBP15.33■□□□□ 0.05
SHANK2-218ENST00000601538 TPM3P06753 285 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 APPP05067 770 aa15.32■□□□□ 0.04
SHANK2-218ENST00000601538 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
SHANK2-218ENST00000601538 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
SHANK2-218ENST00000601538 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
SHANK2-218ENST00000601538 CLSTN1O94985 981 aa15.3■□□□□ 0.04
SHANK2-218ENST00000601538 ARID3AQ99856 593 aa15.3■□□□□ 0.04
SHANK2-218ENST00000601538 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
SHANK2-218ENST00000601538 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
SHANK2-218ENST00000601538 B4GALNT3Q6L9W6 998 aa15.28■□□□□ 0.04
SHANK2-218ENST00000601538 TSPYL1Q9H0U9 437 aa15.27■□□□□ 0.04
SHANK2-218ENST00000601538 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.03
SHANK2-218ENST00000601538 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
SHANK2-218ENST00000601538 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SHANK2-218ENST00000601538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.036e-7■□□□□ 10.6
SHANK2-218ENST00000601538 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-218ENST00000601538 CEP89Q96ST8 783 aa15.24■□□□□ 0.03
SHANK2-218ENST00000601538 KIF3AQ9Y496 699 aa15.24■□□□□ 0.03
SHANK2-218ENST00000601538 CWC15Q9P013 229 aaKnown RBP15.23■□□□□ 0.03
SHANK2-218ENST00000601538 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
SHANK2-218ENST00000601538 HMMRO75330 724 aa15.22■□□□□ 0.03
SHANK2-218ENST00000601538 ARID3CA6NKF2 412 aa15.22■□□□□ 0.03
SHANK2-218ENST00000601538 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
SHANK2-218ENST00000601538 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.03
SHANK2-218ENST00000601538 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
SHANK2-218ENST00000601538 ROCK2O75116 1388 aaKnown RBP15.21■□□□□ 0.03
SHANK2-218ENST00000601538 ATP6V1DQ9Y5K8 247 aa15.2■□□□□ 0.02
SHANK2-218ENST00000601538 TPM1P09493 284 aa15.2■□□□□ 0.02
SHANK2-218ENST00000601538 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
SHANK2-218ENST00000601538 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
SHANK2-218ENST00000601538 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
SHANK2-218ENST00000601538 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHANK2-218ENST00000601538 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
SHANK2-218ENST00000601538 ACBD3Q9H3P7 528 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 A0A0G2JS52 829 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 CDR1P51861 262 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
SHANK2-218ENST00000601538 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 ST18O60284 1047 aa15.17■□□□□ 0.02
SHANK2-218ENST00000601538 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
SHANK2-218ENST00000601538 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 PPP1R15AO75807 674 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-218ENST00000601538 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-218ENST00000601538 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 GOLGA6L19H0YKK7 550 aa15.15■□□□□ 0.02
SHANK2-218ENST00000601538 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
SHANK2-218ENST00000601538 AK7Q96M32 723 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 NPHP1O15259 732 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 AAMPQ13685 434 aa15.14■□□□□ 0.01
SHANK2-218ENST00000601538 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
SHANK2-218ENST00000601538 HIRIP3Q9BW71 556 aaPredicted RBP15.13■□□□□ 0.01
SHANK2-218ENST00000601538 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
SHANK2-218ENST00000601538 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
SHANK2-218ENST00000601538 RDXP35241 583 aaKnown RBP15.11■□□□□ 0.01
SHANK2-218ENST00000601538 ZBTB7CA1YPR0 619 aa15.11■□□□□ 0.01
SHANK2-218ENST00000601538 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
SHANK2-218ENST00000601538 IPO7O95373 1038 aaKnown RBP15.09■□□□□ 0.01
SHANK2-218ENST00000601538 NEUROD2Q15784 382 aa15.09■□□□□ 0.01
SHANK2-218ENST00000601538 EIF3AQ14152 1382 aaKnown RBP15.09■□□□□ 0.01
SHANK2-218ENST00000601538 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 KTN1Q86UP2 1357 aaKnown RBP15.08■□□□□ 0
SHANK2-218ENST00000601538 RUFY1Q96T51 708 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 MRE11P49959 708 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 RCAN3Q9UKA8 241 aa15.08■□□□□ 0
SHANK2-218ENST00000601538 TMF1P82094 1093 aa15.06■□□□□ 0
SHANK2-218ENST00000601538 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
SHANK2-218ENST00000601538 SETD5Q9C0A6 1442 aa15.05■□□□□ -0
SHANK2-218ENST00000601538 CCAR2Q8N163 923 aaKnown RBP15.05■□□□□ -0
SHANK2-218ENST00000601538 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
SHANK2-218ENST00000601538 TPD52L1Q16890 204 aaPredicted RBP15.04■□□□□ -0
SHANK2-218ENST00000601538 BECN2A8MW95 431 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 RASSF8Q8NHQ8 419 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 ANKRD20A12PQ8NF67 263 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
SHANK2-218ENST00000601538 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
SHANK2-218ENST00000601538 RALBP1Q15311 655 aa15.04■□□□□ -0
SHANK2-218ENST00000601538 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
SHANK2-218ENST00000601538 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
SHANK2-218ENST00000601538 PDCL3Q9H2J4 239 aa15.03■□□□□ -0
SHANK2-218ENST00000601538 FAM161AQ3B820 660 aa15.03■□□□□ -0
SHANK2-218ENST00000601538 STK11IPQ8N1F8 1099 aa15.02■□□□□ -0
SHANK2-218ENST00000601538 FAM13BQ9NYF5 915 aa15.02■□□□□ -0
SHANK2-218ENST00000601538 CAVIN1Q6NZI2 390 aaKnown RBP15.02□□□□□ -0.01
SHANK2-218ENST00000601538 ERCC4Q92889 916 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-218ENST00000601538 PATL2C9JE40 543 aaKnown RBP15.01□□□□□ -0.01
SHANK2-218ENST00000601538 U2SURPO15042 1029 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms