RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 BCORL1Q5H9F3 1711 aa14.9□□□□□ -0.02
FARP1-226ENST00000599040 ZFYVE16Q7Z3T8 1539 aa14.9□□□□□ -0.02
FARP1-226ENST00000599040 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
FARP1-226ENST00000599040 SCAPERQ9BY12 1400 aa14.89□□□□□ -0.03
FARP1-226ENST00000599040 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
FARP1-226ENST00000599040 ARHGAP5Q13017 1502 aa14.88□□□□□ -0.03
FARP1-226ENST00000599040 LRRIQ1Q96JM4 1722 aa14.88□□□□□ -0.03
FARP1-226ENST00000599040 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
FARP1-226ENST00000599040 PTPRMP28827 1452 aa14.87□□□□□ -0.03
FARP1-226ENST00000599040 ZNF518AQ6AHZ1 1483 aa14.85□□□□□ -0.03
FARP1-226ENST00000599040 MADDQ8WXG6 1647 aa14.84□□□□□ -0.03
FARP1-226ENST00000599040 YEATS2Q9ULM3 1422 aa14.83□□□□□ -0.04
FARP1-226ENST00000599040 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
FARP1-226ENST00000599040 C9orf84Q5VXU9 1444 aa14.81□□□□□ -0.04
FARP1-226ENST00000599040 ATP10AO60312 1499 aa14.8□□□□□ -0.04
FARP1-226ENST00000599040 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
FARP1-226ENST00000599040 CDC42BPBQ9Y5S2 1711 aa14.8□□□□□ -0.04
FARP1-226ENST00000599040 KDM5CP41229 1560 aa14.79□□□□□ -0.04
FARP1-226ENST00000599040 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
FARP1-226ENST00000599040 FER1L4A9Z1Z3 1794 aa14.76□□□□□ -0.05
FARP1-226ENST00000599040 ABCC1P33527 1531 aa14.76□□□□□ -0.05
FARP1-226ENST00000599040 CDC42BPAQ5VT25 1732 aa14.75□□□□□ -0.05
FARP1-226ENST00000599040 MLECQ14165 292 aa14.75□□□□□ -0.05
FARP1-226ENST00000599040 AFAP1Q8N556 730 aa14.75□□□□□ -0.05
FARP1-226ENST00000599040 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
FARP1-226ENST00000599040 SIGLEC1Q9BZZ2 1709 aa14.74□□□□□ -0.05
FARP1-226ENST00000599040 MLH3Q9UHC1 1453 aa14.74□□□□□ -0.05
FARP1-226ENST00000599040 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
FARP1-226ENST00000599040 REREQ9P2R6 1566 aa14.73□□□□□ -0.05
FARP1-226ENST00000599040 ARHGEF12Q9NZN5 1544 aa14.72□□□□□ -0.05
FARP1-226ENST00000599040 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
FARP1-226ENST00000599040 DIP2CQ9Y2E4 1556 aa14.72□□□□□ -0.05
FARP1-226ENST00000599040 PLEKHH2Q8IVE3 1493 aa14.71□□□□□ -0.05
FARP1-226ENST00000599040 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.06
FARP1-226ENST00000599040 LMTK3Q96Q04 1460 aa14.7□□□□□ -0.06
FARP1-226ENST00000599040 GPATCH8Q9UKJ3 1502 aaKnown RBP14.7□□□□□ -0.06
FARP1-226ENST00000599040 TRAPPC8Q9Y2L5 1435 aa14.69□□□□□ -0.06
FARP1-226ENST00000599040 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
FARP1-226ENST00000599040 CFDP1Q9UEE9 299 aaPredicted RBP14.69□□□□□ -0.06
FARP1-226ENST00000599040 ZNF777Q9ULD5 760 aaPredicted RBP14.69□□□□□ -0.06
FARP1-226ENST00000599040 EHBP1L1Q8N3D4 1523 aa14.69□□□□□ -0.06
FARP1-226ENST00000599040 ABCA6Q8N139 1617 aa14.69□□□□□ -0.06
FARP1-226ENST00000599040 ESF1Q9H501 851 aaKnown RBP14.68□□□□□ -0.06
FARP1-226ENST00000599040 SAMD9LQ8IVG5 1584 aa14.68□□□□□ -0.06
FARP1-226ENST00000599040 KIAA1107Q9UPP5 1409 aa14.67□□□□□ -0.06
FARP1-226ENST00000599040 AGLP35573 1532 aa14.66□□□□□ -0.06
FARP1-226ENST00000599040 SYCP2Q9BX26 1530 aa14.66□□□□□ -0.06
FARP1-226ENST00000599040 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
FARP1-226ENST00000599040 KIDINS220Q9ULH0 1771 aa14.65□□□□□ -0.06
FARP1-226ENST00000599040 ILDR1Q86SU0 546 aaPredicted RBP14.65□□□□□ -0.06
FARP1-226ENST00000599040 PREX1Q8TCU6 1659 aa14.64□□□□□ -0.07
FARP1-226ENST00000599040 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
FARP1-226ENST00000599040 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
FARP1-226ENST00000599040 TIAM1Q13009 1591 aa14.62□□□□□ -0.07
FARP1-226ENST00000599040 CNTLNQ9NXG0 1405 aa14.62□□□□□ -0.07
FARP1-226ENST00000599040 ATP7AQ04656 1500 aa14.61□□□□□ -0.07
FARP1-226ENST00000599040 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
FARP1-226ENST00000599040 INO80Q9ULG1 1556 aaPredicted RBP14.6□□□□□ -0.07
FARP1-226ENST00000599040 UHRF1BP1Q6BDS2 1440 aa14.59□□□□□ -0.07
FARP1-226ENST00000599040 HSPA2P54652 639 aa14.59□□□□□ -0.07
FARP1-226ENST00000599040 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
FARP1-226ENST00000599040 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
FARP1-226ENST00000599040 C3P01024 1663 aa14.57□□□□□ -0.08
FARP1-226ENST00000599040 ADGBQ8N7X0 1667 aa14.56□□□□□ -0.08
FARP1-226ENST00000599040 A2MP01023 1474 aa14.56□□□□□ -0.08
FARP1-226ENST00000599040 NCOA2Q15596 1464 aa14.56□□□□□ -0.08
FARP1-226ENST00000599040 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
FARP1-226ENST00000599040 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
FARP1-226ENST00000599040 RSPH4AQ5TD94 716 aa14.54□□□□□ -0.08
FARP1-226ENST00000599040 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
FARP1-226ENST00000599040 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
FARP1-226ENST00000599040 RTEL1-TNFRSF6BF6WH68 1400 aa14.54□□□□□ -0.08
FARP1-226ENST00000599040 MBD5Q9P267 1494 aa14.53□□□□□ -0.08
FARP1-226ENST00000599040 CCDC141Q6ZP82 1450 aa14.52□□□□□ -0.08
FARP1-226ENST00000599040 ZNF644Q9H582 1327 aaPredicted RBP14.52□□□□□ -0.08
FARP1-226ENST00000599040 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
FARP1-226ENST00000599040 MAP3K1Q13233 1512 aa14.51□□□□□ -0.09
FARP1-226ENST00000599040 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
FARP1-226ENST00000599040 NPATQ14207 1427 aa14.51□□□□□ -0.09
FARP1-226ENST00000599040 LRRC9Q6ZRR7 1453 aa14.5□□□□□ -0.09
FARP1-226ENST00000599040 ZMYM3Q14202 1370 aa14.49□□□□□ -0.09
FARP1-226ENST00000599040 GGT6Q6P531 493 aa14.49□□□□□ -0.09
FARP1-226ENST00000599040 CLTCQ00610 1675 aaKnown RBP14.49□□□□□ -0.09
FARP1-226ENST00000599040 ARHGEF5Q12774 1597 aa14.48□□□□□ -0.09
FARP1-226ENST00000599040 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
FARP1-226ENST00000599040 TSPY4P0CV99 314 aa14.47□□□□□ -0.09
FARP1-226ENST00000599040 TSPY10P0CW01 314 aa14.47□□□□□ -0.09
FARP1-226ENST00000599040 APLP2Q06481 763 aa14.47□□□□□ -0.09
FARP1-226ENST00000599040 FAM135AQ9P2D6 1515 aa14.46□□□□□ -0.1
FARP1-226ENST00000599040 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
FARP1-226ENST00000599040 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
FARP1-226ENST00000599040 PTPRTO14522 1441 aa14.43□□□□□ -0.1
FARP1-226ENST00000599040 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
FARP1-226ENST00000599040 MYOM3Q5VTT5 1437 aa14.42□□□□□ -0.1
FARP1-226ENST00000599040 KIF3BO15066 747 aa14.42□□□□□ -0.1
FARP1-226ENST00000599040 ZNF142P52746 1687 aaPredicted RBP14.42□□□□□ -0.1
FARP1-226ENST00000599040 PTPRKQ15262 1439 aa14.41□□□□□ -0.1
FARP1-226ENST00000599040 NCOA1Q15788 1441 aa14.41□□□□□ -0.1
FARP1-226ENST00000599040 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
FARP1-226ENST00000599040 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms