RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
FARP1-226ENST00000599040 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
FARP1-226ENST00000599040 ABCC9O60706 1549 aa20.22■□□□□ 0.83
FARP1-226ENST00000599040 RB1CC1Q8TDY2 1594 aa19.38■□□□□ 0.69
FARP1-226ENST00000599040 NACADO15069 1562 aa19.27■□□□□ 0.67
FARP1-226ENST00000599040 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
FARP1-226ENST00000599040 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
FARP1-226ENST00000599040 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
FARP1-226ENST00000599040 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
FARP1-226ENST00000599040 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
FARP1-226ENST00000599040 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
FARP1-226ENST00000599040 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
FARP1-226ENST00000599040 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
FARP1-226ENST00000599040 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
FARP1-226ENST00000599040 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
FARP1-226ENST00000599040 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
FARP1-226ENST00000599040 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
FARP1-226ENST00000599040 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
FARP1-226ENST00000599040 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
FARP1-226ENST00000599040 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
FARP1-226ENST00000599040 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
FARP1-226ENST00000599040 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
FARP1-226ENST00000599040 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
FARP1-226ENST00000599040 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
FARP1-226ENST00000599040 BAZ1BQ9UIG0 1483 aaKnown RBP17.57■□□□□ 0.4
FARP1-226ENST00000599040 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
FARP1-226ENST00000599040 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
FARP1-226ENST00000599040 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
FARP1-226ENST00000599040 CUX2O14529 1486 aa17.46■□□□□ 0.39
FARP1-226ENST00000599040 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
FARP1-226ENST00000599040 NESP48681 1621 aa17.37■□□□□ 0.37
FARP1-226ENST00000599040 WIZO95785 1651 aa17.29■□□□□ 0.36
FARP1-226ENST00000599040 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
FARP1-226ENST00000599040 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
FARP1-226ENST00000599040 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
FARP1-226ENST00000599040 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
FARP1-226ENST00000599040 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
FARP1-226ENST00000599040 RSF1Q96T23 1441 aaPredicted RBP17.18■□□□□ 0.34
FARP1-226ENST00000599040 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
FARP1-226ENST00000599040 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
FARP1-226ENST00000599040 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
FARP1-226ENST00000599040 CFTRP13569 1480 aa17.05■□□□□ 0.32
FARP1-226ENST00000599040 WDR62O43379 1518 aa17.04■□□□□ 0.32
FARP1-226ENST00000599040 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
FARP1-226ENST00000599040 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
FARP1-226ENST00000599040 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
FARP1-226ENST00000599040 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
FARP1-226ENST00000599040 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
FARP1-226ENST00000599040 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
FARP1-226ENST00000599040 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
FARP1-226ENST00000599040 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
FARP1-226ENST00000599040 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
FARP1-226ENST00000599040 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
FARP1-226ENST00000599040 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
FARP1-226ENST00000599040 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
FARP1-226ENST00000599040 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
FARP1-226ENST00000599040 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
FARP1-226ENST00000599040 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
FARP1-226ENST00000599040 SOGA1O94964 1423 aa16.48■□□□□ 0.23
FARP1-226ENST00000599040 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
FARP1-226ENST00000599040 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.231e-8■■□□□ 13
FARP1-226ENST00000599040 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
FARP1-226ENST00000599040 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
FARP1-226ENST00000599040 CUX1P39880 1505 aa16.44■□□□□ 0.22
FARP1-226ENST00000599040 CHD1O14646 1710 aa16.41■□□□□ 0.22
FARP1-226ENST00000599040 RIMBP3CA6NJZ7 1639 aa16.4■□□□□ 0.22
FARP1-226ENST00000599040 RIMBP3BA6NNM3 1639 aa16.4■□□□□ 0.22
FARP1-226ENST00000599040 RIMBP3Q9UFD9 1639 aa16.4■□□□□ 0.22
FARP1-226ENST00000599040 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
FARP1-226ENST00000599040 FBLN2P98095 1184 aa16.38■□□□□ 0.21
FARP1-226ENST00000599040 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
FARP1-226ENST00000599040 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
FARP1-226ENST00000599040 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
FARP1-226ENST00000599040 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
FARP1-226ENST00000599040 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
FARP1-226ENST00000599040 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
FARP1-226ENST00000599040 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
FARP1-226ENST00000599040 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
FARP1-226ENST00000599040 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
FARP1-226ENST00000599040 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
FARP1-226ENST00000599040 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.19
FARP1-226ENST00000599040 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
FARP1-226ENST00000599040 TOP2BQ02880 1626 aa16.24■□□□□ 0.19
FARP1-226ENST00000599040 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
FARP1-226ENST00000599040 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
FARP1-226ENST00000599040 CLASP1Q7Z460 1538 aa16.22■□□□□ 0.19
FARP1-226ENST00000599040 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
FARP1-226ENST00000599040 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
FARP1-226ENST00000599040 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
FARP1-226ENST00000599040 ERICH3Q5RHP9 1530 aa16.11■□□□□ 0.17
FARP1-226ENST00000599040 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
FARP1-226ENST00000599040 NUP160Q12769 1436 aa16.05■□□□□ 0.16
FARP1-226ENST00000599040 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
FARP1-226ENST00000599040 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
FARP1-226ENST00000599040 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
FARP1-226ENST00000599040 KIF27Q86VH2 1401 aa15.96■□□□□ 0.15
FARP1-226ENST00000599040 CUL7Q14999 1698 aa15.92■□□□□ 0.14
FARP1-226ENST00000599040 ERCC6L2Q5T890 1561 aa15.92■□□□□ 0.14
FARP1-226ENST00000599040 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
FARP1-226ENST00000599040 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms