RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 CLIP1P30622 1438 aa29.96■■■□□ 2.39
SNRPA-205ENST00000598923 CASKIN1Q8WXD9 1431 aa29.96■■■□□ 2.39
SNRPA-205ENST00000598923 SCAPERQ9BY12 1400 aa29.96■■■□□ 2.39
SNRPA-205ENST00000598923 ZFYVE16Q7Z3T8 1539 aa29.96■■■□□ 2.39
SNRPA-205ENST00000598923 SIGLEC1Q9BZZ2 1709 aa29.96■■■□□ 2.39
SNRPA-205ENST00000598923 POGZQ7Z3K3 1410 aa29.96■■■□□ 2.39
SNRPA-205ENST00000598923 ARID4BQ4LE39 1312 aaPredicted RBP29.95■■■□□ 2.38
SNRPA-205ENST00000598923 YEATS2Q9ULM3 1422 aa29.94■■■□□ 2.38
SNRPA-205ENST00000598923 EFCAB2Q5VUJ9 269 aa29.92■■■□□ 2.38
SNRPA-205ENST00000598923 CCDC18Q5T9S5 1454 aa29.92■■■□□ 2.38
SNRPA-205ENST00000598923 CDC42BPBQ9Y5S2 1711 aa29.9■■■□□ 2.38
SNRPA-205ENST00000598923 RIMS1Q86UR5 1692 aaKnown RBP29.88■■■□□ 2.37
SNRPA-205ENST00000598923 ARHGAP5Q13017 1502 aa29.86■■■□□ 2.37
SNRPA-205ENST00000598923 FYCO1Q9BQS8 1478 aa29.86■■■□□ 2.37
SNRPA-205ENST00000598923 PREX2Q70Z35 1606 aa29.83■■■□□ 2.37
SNRPA-205ENST00000598923 ZNF518AQ6AHZ1 1483 aa29.81■■■□□ 2.36
SNRPA-205ENST00000598923 KDM5CP41229 1560 aa29.81■■■□□ 2.36
SNRPA-205ENST00000598923 ATP10AO60312 1499 aa29.8■■■□□ 2.36
SNRPA-205ENST00000598923 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
SNRPA-205ENST00000598923 CEP162Q5TB80 1403 aa29.78■■■□□ 2.36
SNRPA-205ENST00000598923 FER1L4A9Z1Z3 1794 aa29.76■■■□□ 2.35
SNRPA-205ENST00000598923 C9orf84Q5VXU9 1444 aa29.75■■■□□ 2.35
SNRPA-205ENST00000598923 AFAP1Q8N556 730 aa29.73■■■□□ 2.35
SNRPA-205ENST00000598923 ABCC1P33527 1531 aa29.72■■■□□ 2.35
SNRPA-205ENST00000598923 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
SNRPA-205ENST00000598923 LMTK3Q96Q04 1460 aa29.71■■■□□ 2.35
SNRPA-205ENST00000598923 ARHGEF12Q9NZN5 1544 aa29.7■■■□□ 2.34
SNRPA-205ENST00000598923 DIP2CQ9Y2E4 1556 aa29.69■■■□□ 2.34
SNRPA-205ENST00000598923 ILDR1Q86SU0 546 aaPredicted RBP29.68■■■□□ 2.34
SNRPA-205ENST00000598923 MLH3Q9UHC1 1453 aa29.67■■■□□ 2.34
SNRPA-205ENST00000598923 REREQ9P2R6 1566 aa29.66■■■□□ 2.34
SNRPA-205ENST00000598923 MLECQ14165 292 aa29.66■■■□□ 2.34
SNRPA-205ENST00000598923 ABCA6Q8N139 1617 aa29.66■■■□□ 2.34
SNRPA-205ENST00000598923 TRAPPC8Q9Y2L5 1435 aa29.65■■■□□ 2.34
SNRPA-205ENST00000598923 GPATCH8Q9UKJ3 1502 aaKnown RBP29.61■■■□□ 2.33
SNRPA-205ENST00000598923 KIDINS220Q9ULH0 1771 aa29.6■■■□□ 2.33
SNRPA-205ENST00000598923 SAMD9LQ8IVG5 1584 aa29.6■■■□□ 2.33
SNRPA-205ENST00000598923 MYT1LQ9UL68 1186 aa29.56■■■□□ 2.32
SNRPA-205ENST00000598923 PLPPR3Q6T4P5 718 aa29.55■■■□□ 2.32
SNRPA-205ENST00000598923 AGLP35573 1532 aa29.54■■■□□ 2.32
SNRPA-205ENST00000598923 SYCP2Q9BX26 1530 aa29.52■■■□□ 2.32
SNRPA-205ENST00000598923 MTUS2Q5JR59 1369 aa29.5■■■□□ 2.31
SNRPA-205ENST00000598923 PREX1Q8TCU6 1659 aa29.5■■■□□ 2.31
SNRPA-205ENST00000598923 ZNF777Q9ULD5 760 aaPredicted RBP29.49■■■□□ 2.31
SNRPA-205ENST00000598923 HSPA2P54652 639 aa29.48■■■□□ 2.31
SNRPA-205ENST00000598923 CCNB3Q8WWL7 1395 aa29.47■■■□□ 2.31
SNRPA-205ENST00000598923 KIAA1107Q9UPP5 1409 aa29.46■■■□□ 2.31
SNRPA-205ENST00000598923 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
SNRPA-205ENST00000598923 CEBPAP49715 358 aaPredicted RBP29.45■■■□□ 2.31
SNRPA-205ENST00000598923 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
SNRPA-205ENST00000598923 PLEKHH2Q8IVE3 1493 aa29.44■■■□□ 2.3
SNRPA-205ENST00000598923 C3P01024 1663 aa29.44■■■□□ 2.3
SNRPA-205ENST00000598923 SETD1BQ9UPS6 1966 aaKnown RBP29.43■■■□□ 2.3
SNRPA-205ENST00000598923 HNRNPMP52272 730 aaKnown RBP eCLIP29.43■■■□□ 2.3
SNRPA-205ENST00000598923 CFDP1Q9UEE9 299 aaPredicted RBP29.43■■■□□ 2.3
SNRPA-205ENST00000598923 INO80Q9ULG1 1556 aaPredicted RBP29.41■■■□□ 2.3
SNRPA-205ENST00000598923 VPS8Q8N3P4 1428 aa29.4■■■□□ 2.3
SNRPA-205ENST00000598923 ATP7AQ04656 1500 aa29.4■■■□□ 2.3
SNRPA-205ENST00000598923 SPAG9O60271 1321 aaKnown RBP29.39■■■□□ 2.3
SNRPA-205ENST00000598923 SUPT6HQ7KZ85 1726 aaKnown RBP29.36■■■□□ 2.29
SNRPA-205ENST00000598923 PLXNC1O60486 1568 aa29.34■■■□□ 2.29
SNRPA-205ENST00000598923 MROH2AA6NES4 1674 aa29.31■■■□□ 2.28
SNRPA-205ENST00000598923 CNTLNQ9NXG0 1405 aa29.31■■■□□ 2.28
SNRPA-205ENST00000598923 FBXO41Q8TF61 875 aa29.31■■■□□ 2.28
SNRPA-205ENST00000598923 MBD5Q9P267 1494 aa29.3■■■□□ 2.28
SNRPA-205ENST00000598923 ZNF644Q9H582 1327 aaPredicted RBP29.3■■■□□ 2.28
SNRPA-205ENST00000598923 UHRF1BP1Q6BDS2 1440 aa29.29■■■□□ 2.28
SNRPA-205ENST00000598923 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
SNRPA-205ENST00000598923 ADGBQ8N7X0 1667 aa29.29■■■□□ 2.28
SNRPA-205ENST00000598923 ESF1Q9H501 851 aaKnown RBP29.29■■■□□ 2.28
SNRPA-205ENST00000598923 A2MP01023 1474 aa29.28■■■□□ 2.28
SNRPA-205ENST00000598923 NCOA2Q15596 1464 aa29.26■■■□□ 2.27
SNRPA-205ENST00000598923 APLP2Q06481 763 aa29.23■■■□□ 2.27
SNRPA-205ENST00000598923 CLTCQ00610 1675 aaKnown RBP29.21■■■□□ 2.27
SNRPA-205ENST00000598923 RTEL1-TNFRSF6BF6WH68 1400 aa29.21■■■□□ 2.27
SNRPA-205ENST00000598923 KANK4Q5T7N3 995 aaPredicted RBP29.19■■■□□ 2.26
SNRPA-205ENST00000598923 NPATQ14207 1427 aa29.18■■■□□ 2.26
SNRPA-205ENST00000598923 CAMSAP2Q08AD1 1489 aa29.17■■■□□ 2.26
SNRPA-205ENST00000598923 ZMYM3Q14202 1370 aa29.17■■■□□ 2.26
SNRPA-205ENST00000598923 LRRC9Q6ZRR7 1453 aa29.16■■■□□ 2.26
SNRPA-205ENST00000598923 CCDC141Q6ZP82 1450 aa29.15■■■□□ 2.26
SNRPA-205ENST00000598923 MAP3K1Q13233 1512 aa29.12■■■□□ 2.25
SNRPA-205ENST00000598923 DMRT2Q9Y5R5 561 aa29.12■■■□□ 2.25
SNRPA-205ENST00000598923 DHX29Q7Z478 1369 aaKnown RBP29.11■■■□□ 2.25
SNRPA-205ENST00000598923 ARHGEF5Q12774 1597 aa29.1■■■□□ 2.25
SNRPA-205ENST00000598923 RSPH4AQ5TD94 716 aa29.1■■■□□ 2.25
SNRPA-205ENST00000598923 GGT6Q6P531 493 aa29.1■■■□□ 2.25
SNRPA-205ENST00000598923 PPP6R1Q9UPN7 881 aa29.1■■■□□ 2.25
SNRPA-205ENST00000598923 CERKQ8TCT0 537 aa29.09■■■□□ 2.25
SNRPA-205ENST00000598923 ZNF142P52746 1687 aaPredicted RBP29.06■■■□□ 2.24
SNRPA-205ENST00000598923 PTPRTO14522 1441 aa29.06■■■□□ 2.24
SNRPA-205ENST00000598923 MYO3AQ8NEV4 1616 aa29.05■■■□□ 2.24
SNRPA-205ENST00000598923 PTPRKQ15262 1439 aa29.05■■■□□ 2.24
SNRPA-205ENST00000598923 NCOA1Q15788 1441 aa29.04■■■□□ 2.24
SNRPA-205ENST00000598923 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
SNRPA-205ENST00000598923 MAST1Q9Y2H9 1570 aa28.98■■■□□ 2.23
SNRPA-205ENST00000598923 FAM135AQ9P2D6 1515 aa28.98■■■□□ 2.23
SNRPA-205ENST00000598923 CEP170BQ9Y4F5 1589 aaPredicted RBP28.97■■■□□ 2.23
SNRPA-205ENST00000598923 KIF3BO15066 747 aa28.96■■■□□ 2.23
SNRPA-205ENST00000598923 TSPY4P0CV99 314 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms