RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 ADAMTS12P58397 1594 aa21.32■■□□□ 1
TRPM4-209ENST00000598502 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
TRPM4-209ENST00000598502 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
TRPM4-209ENST00000598502 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
TRPM4-209ENST00000598502 NOP58Q9Y2X3 529 aaKnown RBP21.3■■□□□ 1
TRPM4-209ENST00000598502 HECW1Q76N89 1606 aa21.3■■□□□ 1
TRPM4-209ENST00000598502 IFT140Q96RY7 1462 aa21.29■■□□□ 1
TRPM4-209ENST00000598502 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
TRPM4-209ENST00000598502 SLC4A1APQ9BWU0 796 aaKnown RBP21.28■■□□□ 1
TRPM4-209ENST00000598502 CFDP1Q9UEE9 299 aaPredicted RBP21.28■■□□□ 1
TRPM4-209ENST00000598502 ZNF326Q5BKZ1 582 aaKnown RBP21.27■■□□□ 1
TRPM4-209ENST00000598502 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.27■■□□□ 1
TRPM4-209ENST00000598502 CCER2I3L3R5 266 aa21.27■■□□□ 1
TRPM4-209ENST00000598502 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
TRPM4-209ENST00000598502 HSPA5P11021 654 aaKnown RBP21.26■□□□□ 0.99
TRPM4-209ENST00000598502 L3MBTL2Q969R5 705 aa21.26■□□□□ 0.99
TRPM4-209ENST00000598502 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
TRPM4-209ENST00000598502 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
TRPM4-209ENST00000598502 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
TRPM4-209ENST00000598502 ANP32AP39687 249 aaKnown RBP21.23■□□□□ 0.99
TRPM4-209ENST00000598502 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
TRPM4-209ENST00000598502 PAK3O75914 559 aaPredicted RBP21.22■□□□□ 0.99
TRPM4-209ENST00000598502 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
TRPM4-209ENST00000598502 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
TRPM4-209ENST00000598502 WDR62O43379 1518 aa21.21■□□□□ 0.99
TRPM4-209ENST00000598502 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
TRPM4-209ENST00000598502 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.988e-7■■■□□ 16.1
TRPM4-209ENST00000598502 KDM6BO15054 1643 aa21.19■□□□□ 0.98
TRPM4-209ENST00000598502 ZBTB47Q9UFB7 747 aaPredicted RBP21.18■□□□□ 0.98
TRPM4-209ENST00000598502 EIF5BO60841 1220 aaKnown RBP21.18■□□□□ 0.98
TRPM4-209ENST00000598502 DISP1Q96F81 1524 aa21.18■□□□□ 0.98
TRPM4-209ENST00000598502 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
TRPM4-209ENST00000598502 NUP153P49790 1475 aaKnown RBP21.16■□□□□ 0.98
TRPM4-209ENST00000598502 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
TRPM4-209ENST00000598502 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
TRPM4-209ENST00000598502 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.97
TRPM4-209ENST00000598502 IL27Q8NEV9 243 aa21.14■□□□□ 0.97
TRPM4-209ENST00000598502 EIF4G3O43432 1585 aaKnown RBP21.13■□□□□ 0.97
TRPM4-209ENST00000598502 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
TRPM4-209ENST00000598502 DAPK1P53355 1430 aa21.13■□□□□ 0.97
TRPM4-209ENST00000598502 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
TRPM4-209ENST00000598502 KIAA0556O60303 1618 aa21.12■□□□□ 0.97
TRPM4-209ENST00000598502 ABCC5O15440 1437 aa21.12■□□□□ 0.97
TRPM4-209ENST00000598502 NBPF8Q3BBV2 869 aa21.1■□□□□ 0.97
TRPM4-209ENST00000598502 LAS1LQ9Y4W2 734 aaKnown RBP21.09■□□□□ 0.97
TRPM4-209ENST00000598502 DENND4BO75064 1496 aaPredicted RBP21.08■□□□□ 0.97
TRPM4-209ENST00000598502 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
TRPM4-209ENST00000598502 CARMIL2Q6F5E8 1435 aa21.07■□□□□ 0.96
TRPM4-209ENST00000598502 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
TRPM4-209ENST00000598502 PKD2Q13563 968 aa21.06■□□□□ 0.96
TRPM4-209ENST00000598502 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
TRPM4-209ENST00000598502 TROQ12816 1431 aaPredicted RBP21.04■□□□□ 0.96
TRPM4-209ENST00000598502 HNRNPMP52272 730 aaKnown RBP eCLIP21.03■□□□□ 0.96
TRPM4-209ENST00000598502 KDM2AQ9Y2K7 1162 aa21.03■□□□□ 0.96
TRPM4-209ENST00000598502 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
TRPM4-209ENST00000598502 TSPY4P0CV99 314 aa21.01■□□□□ 0.95
TRPM4-209ENST00000598502 TSPY10P0CW01 314 aa21.01■□□□□ 0.95
TRPM4-209ENST00000598502 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
TRPM4-209ENST00000598502 CCDC184Q52MB2 194 aa21■□□□□ 0.95
TRPM4-209ENST00000598502 CEP170Q5SW79 1584 aa21■□□□□ 0.95
TRPM4-209ENST00000598502 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
TRPM4-209ENST00000598502 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
TRPM4-209ENST00000598502 KDM5BQ9UGL1 1544 aa20.99■□□□□ 0.95
TRPM4-209ENST00000598502 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
TRPM4-209ENST00000598502 CAMSAP2Q08AD1 1489 aa20.98■□□□□ 0.95
TRPM4-209ENST00000598502 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
TRPM4-209ENST00000598502 NEFMP07197 916 aa20.97■□□□□ 0.95
TRPM4-209ENST00000598502 GPATCH8Q9UKJ3 1502 aaKnown RBP20.96■□□□□ 0.95
TRPM4-209ENST00000598502 IPO9Q96P70 1041 aaKnown RBP20.95■□□□□ 0.94
TRPM4-209ENST00000598502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRPM4-209ENST00000598502 NUP155O75694 1391 aa20.94■□□□□ 0.94
TRPM4-209ENST00000598502 KIF14Q15058 1648 aa20.94■□□□□ 0.94
TRPM4-209ENST00000598502 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
TRPM4-209ENST00000598502 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
TRPM4-209ENST00000598502 DNMT1P26358 1616 aaKnown RBP20.91■□□□□ 0.94
TRPM4-209ENST00000598502 CCDC7Q96M83 1385 aa20.9■□□□□ 0.94
TRPM4-209ENST00000598502 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.94
TRPM4-209ENST00000598502 PTPRGP23470 1445 aa20.89■□□□□ 0.93
TRPM4-209ENST00000598502 KIF7Q2M1P5 1343 aa20.89■□□□□ 0.93
TRPM4-209ENST00000598502 ERICH6BQ5W0A0 696 aa20.89■□□□□ 0.93
TRPM4-209ENST00000598502 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
TRPM4-209ENST00000598502 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
TRPM4-209ENST00000598502 PRKRIP1Q9H875 184 aaPredicted RBP20.87■□□□□ 0.93
TRPM4-209ENST00000598502 ATP10BO94823 1461 aa20.86■□□□□ 0.93
TRPM4-209ENST00000598502 NUP160Q12769 1436 aa20.85■□□□□ 0.93
TRPM4-209ENST00000598502 CNTLNQ9NXG0 1405 aa20.85■□□□□ 0.93
TRPM4-209ENST00000598502 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
TRPM4-209ENST00000598502 PZPP20742 1482 aa20.84■□□□□ 0.93
TRPM4-209ENST00000598502 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.93
TRPM4-209ENST00000598502 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.93
TRPM4-209ENST00000598502 C9orf84Q5VXU9 1444 aa20.81■□□□□ 0.92
TRPM4-209ENST00000598502 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
TRPM4-209ENST00000598502 TEX14Q8IWB6 1497 aa20.8■□□□□ 0.92
TRPM4-209ENST00000598502 KIF15Q9NS87 1388 aa20.8■□□□□ 0.92
TRPM4-209ENST00000598502 USP47Q96K76 1375 aa20.79■□□□□ 0.92
TRPM4-209ENST00000598502 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
TRPM4-209ENST00000598502 BRPF3Q9ULD4 1205 aa20.74■□□□□ 0.91
TRPM4-209ENST00000598502 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
TRPM4-209ENST00000598502 ABCA8O94911 1581 aa20.69■□□□□ 0.9
TRPM4-209ENST00000598502 ABCC10Q5T3U5 1492 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms