RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 ZFYVE16Q7Z3T8 1539 aa30.91■■■□□ 2.54
SNRPA-204ENST00000598452 POGZQ7Z3K3 1410 aa30.9■■■□□ 2.54
SNRPA-204ENST00000598452 LRRIQ1Q96JM4 1722 aa30.88■■■□□ 2.53
SNRPA-204ENST00000598452 MAGI2Q86UL8 1455 aa30.87■■■□□ 2.53
SNRPA-204ENST00000598452 CLIP1P30622 1438 aa30.86■■■□□ 2.53
SNRPA-204ENST00000598452 MYO5CQ9NQX4 1742 aa30.86■■■□□ 2.53
SNRPA-204ENST00000598452 SIGLEC1Q9BZZ2 1709 aa30.84■■■□□ 2.53
SNRPA-204ENST00000598452 CASKIN1Q8WXD9 1431 aa30.84■■■□□ 2.53
SNRPA-204ENST00000598452 MLECQ14165 292 aa30.83■■■□□ 2.53
SNRPA-204ENST00000598452 PCF11O94913 1555 aaKnown RBP30.83■■■□□ 2.53
SNRPA-204ENST00000598452 PLPPR3Q6T4P5 718 aa30.81■■■□□ 2.52
SNRPA-204ENST00000598452 ARHGAP5Q13017 1502 aa30.81■■■□□ 2.52
SNRPA-204ENST00000598452 RIMS1Q86UR5 1692 aaKnown RBP30.81■■■□□ 2.52
SNRPA-204ENST00000598452 AFAP1Q8N556 730 aa30.78■■■□□ 2.52
SNRPA-204ENST00000598452 ATP10AO60312 1499 aa30.76■■■□□ 2.51
SNRPA-204ENST00000598452 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.51
SNRPA-204ENST00000598452 ZNF518AQ6AHZ1 1483 aa30.72■■■□□ 2.51
SNRPA-204ENST00000598452 LMTK3Q96Q04 1460 aa30.71■■■□□ 2.51
SNRPA-204ENST00000598452 C9orf84Q5VXU9 1444 aa30.71■■■□□ 2.51
SNRPA-204ENST00000598452 CDC42BPBQ9Y5S2 1711 aa30.68■■■□□ 2.5
SNRPA-204ENST00000598452 MYT1LQ9UL68 1186 aa30.68■■■□□ 2.5
SNRPA-204ENST00000598452 FYCO1Q9BQS8 1478 aa30.68■■■□□ 2.5
SNRPA-204ENST00000598452 KDM5CP41229 1560 aa30.66■■■□□ 2.5
SNRPA-204ENST00000598452 HSPA2P54652 639 aa30.64■■■□□ 2.5
SNRPA-204ENST00000598452 ARHGEF12Q9NZN5 1544 aa30.63■■■□□ 2.49
SNRPA-204ENST00000598452 PREX2Q70Z35 1606 aa30.63■■■□□ 2.49
SNRPA-204ENST00000598452 TRAPPC8Q9Y2L5 1435 aa30.63■■■□□ 2.49
SNRPA-204ENST00000598452 FER1L4A9Z1Z3 1794 aa30.61■■■□□ 2.49
SNRPA-204ENST00000598452 ABCC1P33527 1531 aa30.59■■■□□ 2.49
SNRPA-204ENST00000598452 DIP2CQ9Y2E4 1556 aa30.58■■■□□ 2.49
SNRPA-204ENST00000598452 MLH3Q9UHC1 1453 aa30.57■■■□□ 2.48
SNRPA-204ENST00000598452 CEBPAP49715 358 aaPredicted RBP30.56■■■□□ 2.48
SNRPA-204ENST00000598452 ZNF777Q9ULD5 760 aaPredicted RBP30.56■■■□□ 2.48
SNRPA-204ENST00000598452 CDC42BPAQ5VT25 1732 aa30.55■■■□□ 2.48
SNRPA-204ENST00000598452 ABCA6Q8N139 1617 aa30.53■■■□□ 2.48
SNRPA-204ENST00000598452 ITSN2Q9NZM3 1697 aa30.52■■■□□ 2.48
SNRPA-204ENST00000598452 GPATCH8Q9UKJ3 1502 aaKnown RBP30.51■■■□□ 2.47
SNRPA-204ENST00000598452 REREQ9P2R6 1566 aa30.48■■■□□ 2.47
SNRPA-204ENST00000598452 SAMD9LQ8IVG5 1584 aa30.45■■■□□ 2.47
SNRPA-204ENST00000598452 HNRNPMP52272 730 aaKnown RBP eCLIP30.45■■■□□ 2.47
SNRPA-204ENST00000598452 FBXO41Q8TF61 875 aa30.44■■■□□ 2.46
SNRPA-204ENST00000598452 MTUS2Q5JR59 1369 aa30.43■■■□□ 2.46
SNRPA-204ENST00000598452 KIDINS220Q9ULH0 1771 aa30.43■■■□□ 2.46
SNRPA-204ENST00000598452 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
SNRPA-204ENST00000598452 CFDP1Q9UEE9 299 aaPredicted RBP30.42■■■□□ 2.46
SNRPA-204ENST00000598452 CCNB3Q8WWL7 1395 aa30.41■■■□□ 2.46
SNRPA-204ENST00000598452 AGLP35573 1532 aa30.41■■■□□ 2.46
SNRPA-204ENST00000598452 CEP162Q5TB80 1403 aa30.39■■■□□ 2.45
SNRPA-204ENST00000598452 SPAG9O60271 1321 aaKnown RBP30.38■■■□□ 2.45
SNRPA-204ENST00000598452 ESF1Q9H501 851 aaKnown RBP30.36■■■□□ 2.45
SNRPA-204ENST00000598452 PREX1Q8TCU6 1659 aa30.34■■■□□ 2.45
SNRPA-204ENST00000598452 KIAA1107Q9UPP5 1409 aa30.34■■■□□ 2.45
SNRPA-204ENST00000598452 ZNF644Q9H582 1327 aaPredicted RBP30.31■■■□□ 2.44
SNRPA-204ENST00000598452 PLEKHH2Q8IVE3 1493 aa30.31■■■□□ 2.44
SNRPA-204ENST00000598452 UHRF1BP1Q6BDS2 1440 aa30.3■■■□□ 2.44
SNRPA-204ENST00000598452 C3P01024 1663 aa30.28■■■□□ 2.44
SNRPA-204ENST00000598452 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
SNRPA-204ENST00000598452 EHBP1L1Q8N3D4 1523 aa30.27■■■□□ 2.44
SNRPA-204ENST00000598452 TIAM1Q13009 1591 aa30.27■■■□□ 2.44
SNRPA-204ENST00000598452 CNTLNQ9NXG0 1405 aa30.23■■■□□ 2.43
SNRPA-204ENST00000598452 LOC105371045A0A1W2PR82 267 aa30.23■■■□□ 2.43
SNRPA-204ENST00000598452 INO80Q9ULG1 1556 aaPredicted RBP30.23■■■□□ 2.43
SNRPA-204ENST00000598452 SUPT6HQ7KZ85 1726 aaKnown RBP30.21■■■□□ 2.43
SNRPA-204ENST00000598452 A2MP01023 1474 aa30.2■■■□□ 2.43
SNRPA-204ENST00000598452 SETD1BQ9UPS6 1966 aaKnown RBP30.2■■■□□ 2.43
SNRPA-204ENST00000598452 CERKQ8TCT0 537 aa30.19■■■□□ 2.42
SNRPA-204ENST00000598452 MBD5Q9P267 1494 aa30.19■■■□□ 2.42
SNRPA-204ENST00000598452 ZMYM3Q14202 1370 aa30.16■■■□□ 2.42
SNRPA-204ENST00000598452 PLXNC1O60486 1568 aa30.16■■■□□ 2.42
SNRPA-204ENST00000598452 STRCQ7RTU9 1775 aa30.16■■■□□ 2.42
SNRPA-204ENST00000598452 GGT6Q6P531 493 aa30.15■■■□□ 2.42
SNRPA-204ENST00000598452 NCOA2Q15596 1464 aa30.14■■■□□ 2.42
SNRPA-204ENST00000598452 DMRT2Q9Y5R5 561 aa30.14■■■□□ 2.42
SNRPA-204ENST00000598452 NPATQ14207 1427 aa30.09■■■□□ 2.41
SNRPA-204ENST00000598452 MROH2AA6NES4 1674 aa30.08■■■□□ 2.41
SNRPA-204ENST00000598452 CLTCQ00610 1675 aaKnown RBP30.07■■■□□ 2.4
SNRPA-204ENST00000598452 RTEL1-TNFRSF6BF6WH68 1400 aa30.06■■■□□ 2.4
SNRPA-204ENST00000598452 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
SNRPA-204ENST00000598452 CAMSAP2Q08AD1 1489 aa30.05■■■□□ 2.4
SNRPA-204ENST00000598452 ADGBQ8N7X0 1667 aa30.04■■■□□ 2.4
SNRPA-204ENST00000598452 DHX29Q7Z478 1369 aaKnown RBP30.03■■■□□ 2.4
SNRPA-204ENST00000598452 CCDC141Q6ZP82 1450 aa30.02■■■□□ 2.4
SNRPA-204ENST00000598452 PTPRTO14522 1441 aa30.02■■■□□ 2.4
SNRPA-204ENST00000598452 PTPRKQ15262 1439 aa30.01■■■□□ 2.39
SNRPA-204ENST00000598452 NCOA1Q15788 1441 aa30.01■■■□□ 2.39
SNRPA-204ENST00000598452 PPP6R1Q9UPN7 881 aa30■■■□□ 2.39
SNRPA-204ENST00000598452 LRRC9Q6ZRR7 1453 aa29.99■■■□□ 2.39
SNRPA-204ENST00000598452 KIF3BO15066 747 aa29.97■■■□□ 2.39
SNRPA-204ENST00000598452 KANK4Q5T7N3 995 aaPredicted RBP29.97■■■□□ 2.39
SNRPA-204ENST00000598452 RSPH4AQ5TD94 716 aa29.97■■■□□ 2.39
SNRPA-204ENST00000598452 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
SNRPA-204ENST00000598452 NCKAP5LQ9HCH0 1330 aa29.94■■■□□ 2.38
SNRPA-204ENST00000598452 MYO3AQ8NEV4 1616 aa29.91■■■□□ 2.38
SNRPA-204ENST00000598452 TSPY4P0CV99 314 aa29.9■■■□□ 2.38
SNRPA-204ENST00000598452 TSPY10P0CW01 314 aa29.9■■■□□ 2.38
SNRPA-204ENST00000598452 ARHGEF5Q12774 1597 aa29.89■■■□□ 2.38
SNRPA-204ENST00000598452 CEP170BQ9Y4F5 1589 aaPredicted RBP29.87■■■□□ 2.37
SNRPA-204ENST00000598452 FBXO31Q5XUX0 539 aaPredicted RBP29.87■■■□□ 2.37
SNRPA-204ENST00000598452 LTBP4Q8N2S1 1624 aa29.85■■■□□ 2.37
SNRPA-204ENST00000598452 MAP3K1Q13233 1512 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms