RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
TGFB1-202ENST00000597453 SCAPERQ9BY12 1400 aa24.8■■□□□ 1.56
TGFB1-202ENST00000597453 YEATS2Q9ULM3 1422 aa24.8■■□□□ 1.56
TGFB1-202ENST00000597453 POGZQ7Z3K3 1410 aa24.79■■□□□ 1.56
TGFB1-202ENST00000597453 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
TGFB1-202ENST00000597453 CLIP1P30622 1438 aa24.77■■□□□ 1.56
TGFB1-202ENST00000597453 MAGI2Q86UL8 1455 aa24.76■■□□□ 1.55
TGFB1-202ENST00000597453 RIMS1Q86UR5 1692 aaKnown RBP24.75■■□□□ 1.55
TGFB1-202ENST00000597453 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
TGFB1-202ENST00000597453 CCDC18Q5T9S5 1454 aa24.74■■□□□ 1.55
TGFB1-202ENST00000597453 ARHGAP5Q13017 1502 aa24.73■■□□□ 1.55
TGFB1-202ENST00000597453 CDC42BPBQ9Y5S2 1711 aa24.72■■□□□ 1.55
TGFB1-202ENST00000597453 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.54
TGFB1-202ENST00000597453 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
TGFB1-202ENST00000597453 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
TGFB1-202ENST00000597453 KDM5CP41229 1560 aa24.65■■□□□ 1.54
TGFB1-202ENST00000597453 ATP10AO60312 1499 aa24.64■■□□□ 1.53
TGFB1-202ENST00000597453 CDC42BPAQ5VT25 1732 aa24.64■■□□□ 1.53
TGFB1-202ENST00000597453 FER1L4A9Z1Z3 1794 aa24.62■■□□□ 1.53
TGFB1-202ENST00000597453 AFAP1Q8N556 730 aa24.61■■□□□ 1.53
TGFB1-202ENST00000597453 ABCC1P33527 1531 aa24.61■■□□□ 1.53
TGFB1-202ENST00000597453 C9orf84Q5VXU9 1444 aa24.61■■□□□ 1.53
TGFB1-202ENST00000597453 MLECQ14165 292 aa24.6■■□□□ 1.53
TGFB1-202ENST00000597453 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
TGFB1-202ENST00000597453 LMTK3Q96Q04 1460 aa24.59■■□□□ 1.53
TGFB1-202ENST00000597453 ARHGEF12Q9NZN5 1544 aa24.59■■□□□ 1.53
TGFB1-202ENST00000597453 ILDR1Q86SU0 546 aaPredicted RBP24.57■■□□□ 1.52
TGFB1-202ENST00000597453 DIP2CQ9Y2E4 1556 aa24.57■■□□□ 1.52
TGFB1-202ENST00000597453 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
TGFB1-202ENST00000597453 ABCA6Q8N139 1617 aa24.55■■□□□ 1.52
TGFB1-202ENST00000597453 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
TGFB1-202ENST00000597453 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
TGFB1-202ENST00000597453 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
TGFB1-202ENST00000597453 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
TGFB1-202ENST00000597453 REREQ9P2R6 1566 aa24.5■■□□□ 1.51
TGFB1-202ENST00000597453 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
TGFB1-202ENST00000597453 KIDINS220Q9ULH0 1771 aa24.48■■□□□ 1.51
TGFB1-202ENST00000597453 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
TGFB1-202ENST00000597453 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.51
TGFB1-202ENST00000597453 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.5
TGFB1-202ENST00000597453 HSPA2P54652 639 aa24.43■■□□□ 1.5
TGFB1-202ENST00000597453 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
TGFB1-202ENST00000597453 AGLP35573 1532 aa24.41■■□□□ 1.5
TGFB1-202ENST00000597453 CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
TGFB1-202ENST00000597453 PREX1Q8TCU6 1659 aa24.39■■□□□ 1.49
TGFB1-202ENST00000597453 CCNB3Q8WWL7 1395 aa24.39■■□□□ 1.49
TGFB1-202ENST00000597453 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
TGFB1-202ENST00000597453 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
TGFB1-202ENST00000597453 HNRNPMP52272 730 aaKnown RBP eCLIP24.37■■□□□ 1.49
TGFB1-202ENST00000597453 CFDP1Q9UEE9 299 aaPredicted RBP24.36■■□□□ 1.49
TGFB1-202ENST00000597453 C3P01024 1663 aa24.35■■□□□ 1.49
TGFB1-202ENST00000597453 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
TGFB1-202ENST00000597453 PLEKHH2Q8IVE3 1493 aa24.34■■□□□ 1.49
TGFB1-202ENST00000597453 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.49
TGFB1-202ENST00000597453 ATP7AQ04656 1500 aa24.33■■□□□ 1.49
TGFB1-202ENST00000597453 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
TGFB1-202ENST00000597453 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
TGFB1-202ENST00000597453 SETD1BQ9UPS6 1966 aaKnown RBP24.29■■□□□ 1.48
TGFB1-202ENST00000597453 ZNF644Q9H582 1327 aaPredicted RBP24.28■■□□□ 1.48
TGFB1-202ENST00000597453 PLXNC1O60486 1568 aa24.27■■□□□ 1.48
TGFB1-202ENST00000597453 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
TGFB1-202ENST00000597453 UHRF1BP1Q6BDS2 1440 aa24.24■■□□□ 1.47
TGFB1-202ENST00000597453 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
TGFB1-202ENST00000597453 ESF1Q9H501 851 aaKnown RBP24.23■■□□□ 1.47
TGFB1-202ENST00000597453 CNTLNQ9NXG0 1405 aa24.23■■□□□ 1.47
TGFB1-202ENST00000597453 A2MP01023 1474 aa24.23■■□□□ 1.47
TGFB1-202ENST00000597453 NCOA2Q15596 1464 aa24.23■■□□□ 1.47
TGFB1-202ENST00000597453 STRCQ7RTU9 1775 aa24.22■■□□□ 1.47
TGFB1-202ENST00000597453 MROH2AA6NES4 1674 aa24.22■■□□□ 1.47
TGFB1-202ENST00000597453 FBXO41Q8TF61 875 aa24.22■■□□□ 1.47
TGFB1-202ENST00000597453 ADGBQ8N7X0 1667 aa24.21■■□□□ 1.47
TGFB1-202ENST00000597453 VPS8Q8N3P4 1428 aa24.2■■□□□ 1.46
TGFB1-202ENST00000597453 CLTCQ00610 1675 aaKnown RBP24.19■■□□□ 1.46
TGFB1-202ENST00000597453 CAMSAP2Q08AD1 1489 aa24.17■■□□□ 1.46
TGFB1-202ENST00000597453 RTEL1-TNFRSF6BF6WH68 1400 aa24.13■■□□□ 1.45
TGFB1-202ENST00000597453 ZMYM3Q14202 1370 aa24.13■■□□□ 1.45
TGFB1-202ENST00000597453 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
TGFB1-202ENST00000597453 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
TGFB1-202ENST00000597453 NPATQ14207 1427 aa24.1■■□□□ 1.45
TGFB1-202ENST00000597453 GGT6Q6P531 493 aa24.1■■□□□ 1.45
TGFB1-202ENST00000597453 ARHGEF5Q12774 1597 aa24.07■■□□□ 1.44
TGFB1-202ENST00000597453 DHX29Q7Z478 1369 aaKnown RBP24.06■■□□□ 1.44
TGFB1-202ENST00000597453 CERKQ8TCT0 537 aa24.06■■□□□ 1.44
TGFB1-202ENST00000597453 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
TGFB1-202ENST00000597453 MYO3AQ8NEV4 1616 aa24.05■■□□□ 1.44
TGFB1-202ENST00000597453 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
TGFB1-202ENST00000597453 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
TGFB1-202ENST00000597453 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
TGFB1-202ENST00000597453 NCOA1Q15788 1441 aa24.03■■□□□ 1.44
TGFB1-202ENST00000597453 ZNF142P52746 1687 aaPredicted RBP24.02■■□□□ 1.44
TGFB1-202ENST00000597453 CAMSAP1Q5T5Y3 1602 aa24.02■■□□□ 1.44
TGFB1-202ENST00000597453 PTPRTO14522 1441 aa24.01■■□□□ 1.43
TGFB1-202ENST00000597453 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
TGFB1-202ENST00000597453 PPP6R1Q9UPN7 881 aa24■■□□□ 1.43
TGFB1-202ENST00000597453 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
TGFB1-202ENST00000597453 KIF3BO15066 747 aa23.97■■□□□ 1.43
TGFB1-202ENST00000597453 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.43
TGFB1-202ENST00000597453 MYOM3Q5VTT5 1437 aa23.95■■□□□ 1.42
TGFB1-202ENST00000597453 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
TGFB1-202ENST00000597453 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms