RNA–Protein interactions for RNA: ENST00000597365.1

PAF1-206, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-206ENST00000597365 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
PAF1-206ENST00000597365 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
PAF1-206ENST00000597365 ADGRL1O94910 1474 aa23.34■■□□□ 1.33
PAF1-206ENST00000597365 LRRC9Q6ZRR7 1453 aa23.34■■□□□ 1.33
PAF1-206ENST00000597365 FRMPD1Q5SYB0 1578 aa23.34■■□□□ 1.33
PAF1-206ENST00000597365 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.33
PAF1-206ENST00000597365 DENND4BO75064 1496 aaPredicted RBP23.33■■□□□ 1.33
PAF1-206ENST00000597365 KANK4Q5T7N3 995 aaPredicted RBP23.32■■□□□ 1.32
PAF1-206ENST00000597365 RICTORQ6R327 1708 aa23.32■■□□□ 1.32
PAF1-206ENST00000597365 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
PAF1-206ENST00000597365 CCNB3Q8WWL7 1395 aa23.31■■□□□ 1.32
PAF1-206ENST00000597365 SCAPERQ9BY12 1400 aa23.31■■□□□ 1.32
PAF1-206ENST00000597365 APLP2Q06481 763 aa23.29■■□□□ 1.32
PAF1-206ENST00000597365 NCOA2Q15596 1464 aa23.29■■□□□ 1.32
PAF1-206ENST00000597365 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
PAF1-206ENST00000597365 POGZQ7Z3K3 1410 aa23.25■■□□□ 1.31
PAF1-206ENST00000597365 SAMD9LQ8IVG5 1584 aa23.24■■□□□ 1.31
PAF1-206ENST00000597365 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
PAF1-206ENST00000597365 ITSN2Q9NZM3 1697 aa23.24■■□□□ 1.31
PAF1-206ENST00000597365 ABCC1P33527 1531 aa23.23■■□□□ 1.31
PAF1-206ENST00000597365 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
PAF1-206ENST00000597365 ZMYM4Q5VZL5 1548 aa23.21■■□□□ 1.31
PAF1-206ENST00000597365 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
PAF1-206ENST00000597365 ZNF518AQ6AHZ1 1483 aa23.17■■□□□ 1.3
PAF1-206ENST00000597365 TRAPPC8Q9Y2L5 1435 aa23.17■■□□□ 1.3
PAF1-206ENST00000597365 SYCP2Q9BX26 1530 aa23.17■■□□□ 1.3
PAF1-206ENST00000597365 KDM4FA0A1W2PPD8 638 aa23.16■■□□□ 1.3
PAF1-206ENST00000597365 KDM5CP41229 1560 aa23.15■■□□□ 1.3
PAF1-206ENST00000597365 ZNF644Q9H582 1327 aaPredicted RBP23.15■■□□□ 1.3
PAF1-206ENST00000597365 ARHGEF40Q8TER5 1519 aa23.15■■□□□ 1.3
PAF1-206ENST00000597365 YEATS2Q9ULM3 1422 aa23.15■■□□□ 1.3
PAF1-206ENST00000597365 ZFYVE16Q7Z3T8 1539 aa23.14■■□□□ 1.3
PAF1-206ENST00000597365 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.29
PAF1-206ENST00000597365 MAGI2Q86UL8 1455 aa23.13■■□□□ 1.29
PAF1-206ENST00000597365 PLEKHH2Q8IVE3 1493 aa23.13■■□□□ 1.29
PAF1-206ENST00000597365 KIAA1107Q9UPP5 1409 aa23.12■■□□□ 1.29
PAF1-206ENST00000597365 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
PAF1-206ENST00000597365 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
PAF1-206ENST00000597365 CAMSAP2Q08AD1 1489 aa23.09■■□□□ 1.29
PAF1-206ENST00000597365 MYT1LQ9UL68 1186 aa23.08■■□□□ 1.29
PAF1-206ENST00000597365 MBD5Q9P267 1494 aa23.06■■□□□ 1.28
PAF1-206ENST00000597365 MLH3Q9UHC1 1453 aa23.06■■□□□ 1.28
PAF1-206ENST00000597365 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
PAF1-206ENST00000597365 MIA2Q96PC5 1412 aa23.04■■□□□ 1.28
PAF1-206ENST00000597365 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
PAF1-206ENST00000597365 ATP10AO60312 1499 aa23.04■■□□□ 1.28
PAF1-206ENST00000597365 DIP2CQ9Y2E4 1556 aa23.03■■□□□ 1.28
PAF1-206ENST00000597365 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
PAF1-206ENST00000597365 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
PAF1-206ENST00000597365 ARID4BQ4LE39 1312 aaPredicted RBP23.02■■□□□ 1.28
PAF1-206ENST00000597365 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
PAF1-206ENST00000597365 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
PAF1-206ENST00000597365 ATP7AQ04656 1500 aa22.98■■□□□ 1.27
PAF1-206ENST00000597365 INO80Q9ULG1 1556 aaPredicted RBP22.98■■□□□ 1.27
PAF1-206ENST00000597365 CCDC141Q6ZP82 1450 aa22.98■■□□□ 1.27
PAF1-206ENST00000597365 ARHGEF5Q12774 1597 aa22.97■■□□□ 1.27
PAF1-206ENST00000597365 PTPN23Q9H3S7 1636 aa22.97■■□□□ 1.27
PAF1-206ENST00000597365 FGD6Q6ZV73 1430 aa22.97■■□□□ 1.27
PAF1-206ENST00000597365 BCORL1Q5H9F3 1711 aa22.96■■□□□ 1.27
PAF1-206ENST00000597365 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
PAF1-206ENST00000597365 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
PAF1-206ENST00000597365 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
PAF1-206ENST00000597365 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
PAF1-206ENST00000597365 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
PAF1-206ENST00000597365 MLECQ14165 292 aa22.89■■□□□ 1.25
PAF1-206ENST00000597365 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
PAF1-206ENST00000597365 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
PAF1-206ENST00000597365 MADDQ8WXG6 1647 aa22.88■■□□□ 1.25
PAF1-206ENST00000597365 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
PAF1-206ENST00000597365 AGLP35573 1532 aa22.86■■□□□ 1.25
PAF1-206ENST00000597365 A2MP01023 1474 aa22.85■■□□□ 1.25
PAF1-206ENST00000597365 MAST1Q9Y2H9 1570 aa22.85■■□□□ 1.25
PAF1-206ENST00000597365 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
PAF1-206ENST00000597365 ABCC5O15440 1437 aa22.84■■□□□ 1.25
PAF1-206ENST00000597365 DNMT1P26358 1616 aaKnown RBP22.84■■□□□ 1.25
PAF1-206ENST00000597365 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
PAF1-206ENST00000597365 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
PAF1-206ENST00000597365 DAPK1P53355 1430 aa22.82■■□□□ 1.24
PAF1-206ENST00000597365 RIMS1Q86UR5 1692 aaKnown RBP22.82■■□□□ 1.24
PAF1-206ENST00000597365 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
PAF1-206ENST00000597365 DHX29Q7Z478 1369 aaKnown RBP22.79■■□□□ 1.24
PAF1-206ENST00000597365 PTPRMP28827 1452 aa22.79■■□□□ 1.24
PAF1-206ENST00000597365 SHANK2Q9UPX8 1470 aa22.79■■□□□ 1.24
PAF1-206ENST00000597365 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
PAF1-206ENST00000597365 CHIC2Q9UKJ5 165 aa22.74■■□□□ 1.23
PAF1-206ENST00000597365 KIF3BO15066 747 aa22.7■■□□□ 1.22
PAF1-206ENST00000597365 GGT6Q6P531 493 aa22.7■■□□□ 1.22
PAF1-206ENST00000597365 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
PAF1-206ENST00000597365 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
PAF1-206ENST00000597365 DUOX2Q9NRD8 1548 aa22.68■■□□□ 1.22
PAF1-206ENST00000597365 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
PAF1-206ENST00000597365 RRBP1Q9P2E9 1410 aaKnown RBP22.68■■□□□ 1.22
PAF1-206ENST00000597365 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
PAF1-206ENST00000597365 ANKRD30AQ9BXX3 1397 aa22.67■■□□□ 1.22
PAF1-206ENST00000597365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.67■■□□□ 1.22
PAF1-206ENST00000597365 ESF1Q9H501 851 aaKnown RBP22.66■■□□□ 1.22
PAF1-206ENST00000597365 ADGRL2O95490 1459 aa22.66■■□□□ 1.22
PAF1-206ENST00000597365 NCOA1Q15788 1441 aa22.65■■□□□ 1.22
PAF1-206ENST00000597365 CEBPAP49715 358 aaPredicted RBP22.65■■□□□ 1.22
PAF1-206ENST00000597365 EIF2AK4Q9P2K8 1649 aaKnown RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms