RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 SUPT6HQ7KZ85 1726 aaKnown RBP28.61■■■□□ 2.17
IRF3-216ENST00000597180 FRMPD1Q5SYB0 1578 aa28.61■■■□□ 2.17
IRF3-216ENST00000597180 LRRC9Q6ZRR7 1453 aa28.6■■■□□ 2.17
IRF3-216ENST00000597180 EFCAB2Q5VUJ9 269 aa28.6■■■□□ 2.17
IRF3-216ENST00000597180 GPATCH8Q9UKJ3 1502 aaKnown RBP28.59■■■□□ 2.17
IRF3-216ENST00000597180 ADGRL1O94910 1474 aa28.58■■■□□ 2.17
IRF3-216ENST00000597180 DENND4BO75064 1496 aaPredicted RBP28.56■■■□□ 2.16
IRF3-216ENST00000597180 ITSN2Q9NZM3 1697 aa28.56■■■□□ 2.16
IRF3-216ENST00000597180 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
IRF3-216ENST00000597180 CCNB3Q8WWL7 1395 aa28.52■■■□□ 2.16
IRF3-216ENST00000597180 RAPGEF3O95398 923 aa28.52■■■□□ 2.16
IRF3-216ENST00000597180 SCAPERQ9BY12 1400 aa28.52■■■□□ 2.16
IRF3-216ENST00000597180 ABCC1P33527 1531 aa28.5■■■□□ 2.15
IRF3-216ENST00000597180 ZMYM4Q5VZL5 1548 aa28.49■■■□□ 2.15
IRF3-216ENST00000597180 KANK4Q5T7N3 995 aaPredicted RBP28.49■■■□□ 2.15
IRF3-216ENST00000597180 POGZQ7Z3K3 1410 aa28.49■■■□□ 2.15
IRF3-216ENST00000597180 APLP2Q06481 763 aa28.48■■■□□ 2.15
IRF3-216ENST00000597180 SAMD9LQ8IVG5 1584 aa28.48■■■□□ 2.15
IRF3-216ENST00000597180 CFDP1Q9UEE9 299 aaPredicted RBP28.42■■■□□ 2.14
IRF3-216ENST00000597180 ARHGEF12Q9NZN5 1544 aa28.42■■■□□ 2.14
IRF3-216ENST00000597180 KDM5CP41229 1560 aa28.41■■■□□ 2.14
IRF3-216ENST00000597180 ZNF518AQ6AHZ1 1483 aa28.41■■■□□ 2.14
IRF3-216ENST00000597180 ARHGEF40Q8TER5 1519 aa28.4■■■□□ 2.14
IRF3-216ENST00000597180 MAGI2Q86UL8 1455 aa28.39■■■□□ 2.13
IRF3-216ENST00000597180 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.13
IRF3-216ENST00000597180 SYCP2Q9BX26 1530 aa28.37■■■□□ 2.13
IRF3-216ENST00000597180 KIAA1107Q9UPP5 1409 aa28.36■■■□□ 2.13
IRF3-216ENST00000597180 ZNF777Q9ULD5 760 aaPredicted RBP28.36■■■□□ 2.13
IRF3-216ENST00000597180 ZFYVE16Q7Z3T8 1539 aa28.35■■■□□ 2.13
IRF3-216ENST00000597180 TRAPPC8Q9Y2L5 1435 aa28.35■■■□□ 2.13
IRF3-216ENST00000597180 HECW2Q9P2P5 1572 aa28.33■■■□□ 2.13
IRF3-216ENST00000597180 AFAP1Q8N556 730 aa28.31■■■□□ 2.12
IRF3-216ENST00000597180 MYOM3Q5VTT5 1437 aa28.3■■■□□ 2.12
IRF3-216ENST00000597180 YEATS2Q9ULM3 1422 aa28.3■■■□□ 2.12
IRF3-216ENST00000597180 CAMSAP2Q08AD1 1489 aa28.28■■■□□ 2.12
IRF3-216ENST00000597180 MLH3Q9UHC1 1453 aa28.28■■■□□ 2.12
IRF3-216ENST00000597180 ZNF644Q9H582 1327 aaPredicted RBP28.27■■■□□ 2.12
IRF3-216ENST00000597180 KIDINS220Q9ULH0 1771 aa28.27■■■□□ 2.12
IRF3-216ENST00000597180 MIA2Q96PC5 1412 aa28.26■■■□□ 2.12
IRF3-216ENST00000597180 MBD5Q9P267 1494 aa28.26■■■□□ 2.11
IRF3-216ENST00000597180 HNRNPMP52272 730 aaKnown RBP eCLIP28.25■■■□□ 2.11
IRF3-216ENST00000597180 ABCA6Q8N139 1617 aa28.22■■■□□ 2.11
IRF3-216ENST00000597180 SIGLEC1Q9BZZ2 1709 aa28.22■■■□□ 2.11
IRF3-216ENST00000597180 DIP2CQ9Y2E4 1556 aa28.22■■■□□ 2.11
IRF3-216ENST00000597180 INO80Q9ULG1 1556 aaPredicted RBP28.21■■■□□ 2.11
IRF3-216ENST00000597180 ATP10AO60312 1499 aa28.21■■■□□ 2.11
IRF3-216ENST00000597180 ARHGEF5Q12774 1597 aa28.2■■■□□ 2.11
IRF3-216ENST00000597180 KDM4FA0A1W2PPD8 638 aa28.18■■■□□ 2.1
IRF3-216ENST00000597180 REREQ9P2R6 1566 aa28.18■■■□□ 2.1
IRF3-216ENST00000597180 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
IRF3-216ENST00000597180 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
IRF3-216ENST00000597180 PTPN23Q9H3S7 1636 aa28.17■■■□□ 2.1
IRF3-216ENST00000597180 CCDC141Q6ZP82 1450 aa28.16■■■□□ 2.1
IRF3-216ENST00000597180 BCORL1Q5H9F3 1711 aa28.16■■■□□ 2.1
IRF3-216ENST00000597180 SPAG9O60271 1321 aaKnown RBP28.16■■■□□ 2.1
IRF3-216ENST00000597180 FGD6Q6ZV73 1430 aa28.15■■■□□ 2.1
IRF3-216ENST00000597180 RSPH4AQ5TD94 716 aa28.13■■■□□ 2.09
IRF3-216ENST00000597180 ADAMTSL3P82987 1691 aa28.13■■■□□ 2.09
IRF3-216ENST00000597180 MYT1LQ9UL68 1186 aa28.12■■■□□ 2.09
IRF3-216ENST00000597180 TCOF1Q13428 1488 aaKnown RBP28.11■■■□□ 2.09
IRF3-216ENST00000597180 RTEL1-TNFRSF6BF6WH68 1400 aa28.1■■■□□ 2.09
IRF3-216ENST00000597180 ADGBQ8N7X0 1667 aa28.09■■■□□ 2.09
IRF3-216ENST00000597180 ARID4BQ4LE39 1312 aaPredicted RBP28.07■■■□□ 2.08
IRF3-216ENST00000597180 MAST1Q9Y2H9 1570 aa28.07■■■□□ 2.08
IRF3-216ENST00000597180 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
IRF3-216ENST00000597180 AGLP35573 1532 aa28.05■■■□□ 2.08
IRF3-216ENST00000597180 DNMT1P26358 1616 aaKnown RBP28.03■■■□□ 2.08
IRF3-216ENST00000597180 PLXNC1O60486 1568 aa28.03■■■□□ 2.08
IRF3-216ENST00000597180 MADDQ8WXG6 1647 aa28.01■■■□□ 2.07
IRF3-216ENST00000597180 PPARGC1BQ86YN6 1023 aaKnown RBP27.99■■■□□ 2.07
IRF3-216ENST00000597180 A2MP01023 1474 aa27.99■■■□□ 2.07
IRF3-216ENST00000597180 SHANK2Q9UPX8 1470 aa27.98■■■□□ 2.07
IRF3-216ENST00000597180 TSPY4P0CV99 314 aa27.98■■■□□ 2.07
IRF3-216ENST00000597180 TSPY10P0CW01 314 aa27.98■■■□□ 2.07
IRF3-216ENST00000597180 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
IRF3-216ENST00000597180 FER1L4A9Z1Z3 1794 aa27.98■■■□□ 2.07
IRF3-216ENST00000597180 ABCC5O15440 1437 aa27.97■■■□□ 2.07
IRF3-216ENST00000597180 DAPK1P53355 1430 aa27.96■■■□□ 2.07
IRF3-216ENST00000597180 RIMS1Q86UR5 1692 aaKnown RBP27.94■■■□□ 2.06
IRF3-216ENST00000597180 DHX29Q7Z478 1369 aaKnown RBP27.9■■■□□ 2.06
IRF3-216ENST00000597180 MLECQ14165 292 aa27.89■■■□□ 2.06
IRF3-216ENST00000597180 PTPRMP28827 1452 aa27.89■■■□□ 2.05
IRF3-216ENST00000597180 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
IRF3-216ENST00000597180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.85■■■□□ 2.053e-6■□□□□ 11.3
IRF3-216ENST00000597180 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
IRF3-216ENST00000597180 EIF2AK4Q9P2K8 1649 aaKnown RBP27.82■■■□□ 2.04
IRF3-216ENST00000597180 DUOX2Q9NRD8 1548 aa27.82■■■□□ 2.04
IRF3-216ENST00000597180 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
IRF3-216ENST00000597180 KIF15Q9NS87 1388 aa27.77■■■□□ 2.04
IRF3-216ENST00000597180 MROH2AA6NES4 1674 aa27.77■■■□□ 2.04
IRF3-216ENST00000597180 RNF17Q9BXT8 1623 aaKnown RBP27.77■■■□□ 2.04
IRF3-216ENST00000597180 NCOA1Q15788 1441 aa27.76■■■□□ 2.04
IRF3-216ENST00000597180 ANKRD30AQ9BXX3 1397 aa27.76■■■□□ 2.03
IRF3-216ENST00000597180 PTPRKQ15262 1439 aa27.75■■■□□ 2.03
IRF3-216ENST00000597180 CNTLNQ9NXG0 1405 aa27.75■■■□□ 2.03
IRF3-216ENST00000597180 C3P01024 1663 aa27.74■■■□□ 2.03
IRF3-216ENST00000597180 CLTCQ00610 1675 aaKnown RBP27.74■■■□□ 2.03
IRF3-216ENST00000597180 KIF3BO15066 747 aa27.73■■■□□ 2.03
IRF3-216ENST00000597180 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
IRF3-216ENST00000597180 ERBINQ96RT1 1412 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms