RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 MYO5CQ9NQX4 1742 aa25.07■■□□□ 1.6
PPFIA4-208ENST00000597023 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
PPFIA4-208ENST00000597023 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
PPFIA4-208ENST00000597023 AFAP1Q8N556 730 aa25.04■■□□□ 1.6
PPFIA4-208ENST00000597023 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
PPFIA4-208ENST00000597023 ZFYVE16Q7Z3T8 1539 aa25.03■■□□□ 1.6
PPFIA4-208ENST00000597023 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
PPFIA4-208ENST00000597023 MLECQ14165 292 aa25.01■■□□□ 1.59
PPFIA4-208ENST00000597023 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
PPFIA4-208ENST00000597023 ADAMTSL3P82987 1691 aa25■■□□□ 1.59
PPFIA4-208ENST00000597023 PTPRMP28827 1452 aa24.98■■□□□ 1.59
PPFIA4-208ENST00000597023 MAGI2Q86UL8 1455 aa24.98■■□□□ 1.59
PPFIA4-208ENST00000597023 ZNF777Q9ULD5 760 aaPredicted RBP24.98■■□□□ 1.59
PPFIA4-208ENST00000597023 BCORL1Q5H9F3 1711 aa24.98■■□□□ 1.59
PPFIA4-208ENST00000597023 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
PPFIA4-208ENST00000597023 CDC42BPBQ9Y5S2 1711 aa24.96■■□□□ 1.59
PPFIA4-208ENST00000597023 HECW2Q9P2P5 1572 aa24.95■■□□□ 1.58
PPFIA4-208ENST00000597023 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
PPFIA4-208ENST00000597023 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
PPFIA4-208ENST00000597023 ARHGEF12Q9NZN5 1544 aa24.93■■□□□ 1.58
PPFIA4-208ENST00000597023 SIGLEC1Q9BZZ2 1709 aa24.93■■□□□ 1.58
PPFIA4-208ENST00000597023 TRAPPC8Q9Y2L5 1435 aa24.93■■□□□ 1.58
PPFIA4-208ENST00000597023 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
PPFIA4-208ENST00000597023 ATP10AO60312 1499 aa24.92■■□□□ 1.58
PPFIA4-208ENST00000597023 PREX2Q70Z35 1606 aa24.92■■□□□ 1.58
PPFIA4-208ENST00000597023 GPATCH8Q9UKJ3 1502 aaKnown RBP24.89■■□□□ 1.57
PPFIA4-208ENST00000597023 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
PPFIA4-208ENST00000597023 CDC42BPAQ5VT25 1732 aa24.87■■□□□ 1.57
PPFIA4-208ENST00000597023 HNRNPMP52272 730 aaKnown RBP eCLIP24.87■■□□□ 1.57
PPFIA4-208ENST00000597023 ABCC1P33527 1531 aa24.86■■□□□ 1.57
PPFIA4-208ENST00000597023 KDM5CP41229 1560 aa24.86■■□□□ 1.57
PPFIA4-208ENST00000597023 CCNB3Q8WWL7 1395 aa24.86■■□□□ 1.57
PPFIA4-208ENST00000597023 CFDP1Q9UEE9 299 aaPredicted RBP24.86■■□□□ 1.57
PPFIA4-208ENST00000597023 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
PPFIA4-208ENST00000597023 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
PPFIA4-208ENST00000597023 MLH3Q9UHC1 1453 aa24.8■■□□□ 1.56
PPFIA4-208ENST00000597023 ITSN2Q9NZM3 1697 aa24.8■■□□□ 1.56
PPFIA4-208ENST00000597023 ZNF644Q9H582 1327 aaPredicted RBP24.79■■□□□ 1.56
PPFIA4-208ENST00000597023 DIP2CQ9Y2E4 1556 aa24.79■■□□□ 1.56
PPFIA4-208ENST00000597023 SYCP2Q9BX26 1530 aa24.78■■□□□ 1.56
PPFIA4-208ENST00000597023 EHBP1L1Q8N3D4 1523 aa24.76■■□□□ 1.55
PPFIA4-208ENST00000597023 ABCA6Q8N139 1617 aa24.76■■□□□ 1.55
PPFIA4-208ENST00000597023 CEBPAP49715 358 aaPredicted RBP24.76■■□□□ 1.55
PPFIA4-208ENST00000597023 SPAG9O60271 1321 aaKnown RBP24.75■■□□□ 1.55
PPFIA4-208ENST00000597023 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
PPFIA4-208ENST00000597023 TIAM1Q13009 1591 aa24.72■■□□□ 1.55
PPFIA4-208ENST00000597023 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
PPFIA4-208ENST00000597023 HSPA2P54652 639 aa24.71■■□□□ 1.55
PPFIA4-208ENST00000597023 FER1L4A9Z1Z3 1794 aa24.7■■□□□ 1.55
PPFIA4-208ENST00000597023 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.55
PPFIA4-208ENST00000597023 PLEKHH2Q8IVE3 1493 aa24.69■■□□□ 1.54
PPFIA4-208ENST00000597023 LMTK3Q96Q04 1460 aa24.69■■□□□ 1.54
PPFIA4-208ENST00000597023 NCOA2Q15596 1464 aa24.68■■□□□ 1.54
PPFIA4-208ENST00000597023 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
PPFIA4-208ENST00000597023 REREQ9P2R6 1566 aa24.66■■□□□ 1.54
PPFIA4-208ENST00000597023 ESF1Q9H501 851 aaKnown RBP24.64■■□□□ 1.54
PPFIA4-208ENST00000597023 AGLP35573 1532 aa24.63■■□□□ 1.53
PPFIA4-208ENST00000597023 ATP7AQ04656 1500 aa24.61■■□□□ 1.53
PPFIA4-208ENST00000597023 LRRC9Q6ZRR7 1453 aa24.61■■□□□ 1.53
PPFIA4-208ENST00000597023 MBD5Q9P267 1494 aa24.61■■□□□ 1.53
PPFIA4-208ENST00000597023 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
PPFIA4-208ENST00000597023 ILDR1Q86SU0 546 aaPredicted RBP24.59■■□□□ 1.53
PPFIA4-208ENST00000597023 INO80Q9ULG1 1556 aaPredicted RBP24.56■■□□□ 1.52
PPFIA4-208ENST00000597023 A2MP01023 1474 aa24.56■■□□□ 1.52
PPFIA4-208ENST00000597023 GGT6Q6P531 493 aa24.55■■□□□ 1.52
PPFIA4-208ENST00000597023 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
PPFIA4-208ENST00000597023 APLP2Q06481 763 aa24.5■■□□□ 1.51
PPFIA4-208ENST00000597023 RTEL1-TNFRSF6BF6WH68 1400 aa24.49■■□□□ 1.51
PPFIA4-208ENST00000597023 CCDC141Q6ZP82 1450 aa24.49■■□□□ 1.51
PPFIA4-208ENST00000597023 MAP3K1Q13233 1512 aa24.49■■□□□ 1.51
PPFIA4-208ENST00000597023 RSPH4AQ5TD94 716 aa24.48■■□□□ 1.51
PPFIA4-208ENST00000597023 C3P01024 1663 aa24.47■■□□□ 1.51
PPFIA4-208ENST00000597023 PLXNC1O60486 1568 aa24.47■■□□□ 1.51
PPFIA4-208ENST00000597023 CNTLNQ9NXG0 1405 aa24.47■■□□□ 1.51
PPFIA4-208ENST00000597023 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
PPFIA4-208ENST00000597023 ZMYM3Q14202 1370 aa24.46■■□□□ 1.51
PPFIA4-208ENST00000597023 DHX29Q7Z478 1369 aaKnown RBP24.45■■□□□ 1.5
PPFIA4-208ENST00000597023 TSPY4P0CV99 314 aa24.45■■□□□ 1.5
PPFIA4-208ENST00000597023 TSPY10P0CW01 314 aa24.45■■□□□ 1.5
PPFIA4-208ENST00000597023 PREX1Q8TCU6 1659 aa24.43■■□□□ 1.5
PPFIA4-208ENST00000597023 KIF3BO15066 747 aa24.43■■□□□ 1.5
PPFIA4-208ENST00000597023 MYOM3Q5VTT5 1437 aa24.42■■□□□ 1.5
PPFIA4-208ENST00000597023 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
PPFIA4-208ENST00000597023 ARHGEF5Q12774 1597 aa24.37■■□□□ 1.49
PPFIA4-208ENST00000597023 CLTCQ00610 1675 aaKnown RBP24.37■■□□□ 1.49
PPFIA4-208ENST00000597023 MIA2Q96PC5 1412 aa24.36■■□□□ 1.49
PPFIA4-208ENST00000597023 PPP6R1Q9UPN7 881 aa24.36■■□□□ 1.49
PPFIA4-208ENST00000597023 SETD1BQ9UPS6 1966 aaKnown RBP24.36■■□□□ 1.49
PPFIA4-208ENST00000597023 NPATQ14207 1427 aa24.33■■□□□ 1.49
PPFIA4-208ENST00000597023 MROH2AA6NES4 1674 aa24.32■■□□□ 1.48
PPFIA4-208ENST00000597023 PTPRKQ15262 1439 aa24.31■■□□□ 1.48
PPFIA4-208ENST00000597023 FBXO31Q5XUX0 539 aaPredicted RBP24.29■■□□□ 1.48
PPFIA4-208ENST00000597023 FBXO41Q8TF61 875 aa24.29■■□□□ 1.48
PPFIA4-208ENST00000597023 WASHC2CQ9Y4E1 1318 aa24.29■■□□□ 1.48
PPFIA4-208ENST00000597023 STRCQ7RTU9 1775 aa24.27■■□□□ 1.48
PPFIA4-208ENST00000597023 DMRT2Q9Y5R5 561 aa24.27■■□□□ 1.48
PPFIA4-208ENST00000597023 ABCC5O15440 1437 aa24.25■■□□□ 1.47
PPFIA4-208ENST00000597023 MAST1Q9Y2H9 1570 aa24.25■■□□□ 1.47
PPFIA4-208ENST00000597023 RRP7BPQ9NSQ0 103 aa24.24■■□□□ 1.47
PPFIA4-208ENST00000597023 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms