RNA–Protein interactions for RNA: ENST00000596983.1

MCM3-206, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 3

Gene MCM3, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-206ENST00000596983 KIF14Q15058 1648 aa23.88■■□□□ 1.41
MCM3-206ENST00000596983 MAGI2Q86UL8 1455 aa23.87■■□□□ 1.41
MCM3-206ENST00000596983 SCAPERQ9BY12 1400 aa23.87■■□□□ 1.41
MCM3-206ENST00000596983 MYO5CQ9NQX4 1742 aa23.87■■□□□ 1.41
MCM3-206ENST00000596983 TROQ12816 1431 aaPredicted RBP23.86■■□□□ 1.41
MCM3-206ENST00000596983 CLIP1P30622 1438 aa23.84■■□□□ 1.41
MCM3-206ENST00000596983 LRRIQ1Q96JM4 1722 aa23.84■■□□□ 1.41
MCM3-206ENST00000596983 SIGLEC1Q9BZZ2 1709 aa23.83■■□□□ 1.41
MCM3-206ENST00000596983 RIMS1Q86UR5 1692 aaKnown RBP23.83■■□□□ 1.4
MCM3-206ENST00000596983 EFCAB2Q5VUJ9 269 aa23.82■■□□□ 1.4
MCM3-206ENST00000596983 PCF11O94913 1555 aaKnown RBP23.8■■□□□ 1.4
MCM3-206ENST00000596983 ARHGAP5Q13017 1502 aa23.78■■□□□ 1.4
MCM3-206ENST00000596983 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
MCM3-206ENST00000596983 CCDC18Q5T9S5 1454 aa23.76■■□□□ 1.39
MCM3-206ENST00000596983 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
MCM3-206ENST00000596983 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
MCM3-206ENST00000596983 ATP10AO60312 1499 aa23.74■■□□□ 1.39
MCM3-206ENST00000596983 C9orf84Q5VXU9 1444 aa23.73■■□□□ 1.39
MCM3-206ENST00000596983 KDM5CP41229 1560 aa23.72■■□□□ 1.39
MCM3-206ENST00000596983 MLECQ14165 292 aa23.71■■□□□ 1.39
MCM3-206ENST00000596983 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
MCM3-206ENST00000596983 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
MCM3-206ENST00000596983 CDC42BPBQ9Y5S2 1711 aa23.69■■□□□ 1.38
MCM3-206ENST00000596983 PREX2Q70Z35 1606 aa23.69■■□□□ 1.38
MCM3-206ENST00000596983 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
MCM3-206ENST00000596983 AFAP1Q8N556 730 aa23.67■■□□□ 1.38
MCM3-206ENST00000596983 PLPPR3Q6T4P5 718 aa23.66■■□□□ 1.38
MCM3-206ENST00000596983 ABCC1P33527 1531 aa23.64■■□□□ 1.38
MCM3-206ENST00000596983 DIP2CQ9Y2E4 1556 aa23.63■■□□□ 1.37
MCM3-206ENST00000596983 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
MCM3-206ENST00000596983 TRAPPC8Q9Y2L5 1435 aa23.6■■□□□ 1.37
MCM3-206ENST00000596983 REREQ9P2R6 1566 aa23.6■■□□□ 1.37
MCM3-206ENST00000596983 ITSN2Q9NZM3 1697 aa23.6■■□□□ 1.37
MCM3-206ENST00000596983 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
MCM3-206ENST00000596983 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
MCM3-206ENST00000596983 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
MCM3-206ENST00000596983 HSPA2P54652 639 aa23.59■■□□□ 1.37
MCM3-206ENST00000596983 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
MCM3-206ENST00000596983 FBXO41Q8TF61 875 aa23.53■■□□□ 1.36
MCM3-206ENST00000596983 SAMD9LQ8IVG5 1584 aa23.52■■□□□ 1.36
MCM3-206ENST00000596983 AGLP35573 1532 aa23.51■■□□□ 1.35
MCM3-206ENST00000596983 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
MCM3-206ENST00000596983 PREX1Q8TCU6 1659 aa23.51■■□□□ 1.35
MCM3-206ENST00000596983 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
MCM3-206ENST00000596983 CEBPAP49715 358 aaPredicted RBP23.5■■□□□ 1.35
MCM3-206ENST00000596983 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
MCM3-206ENST00000596983 ZNF777Q9ULD5 760 aaPredicted RBP23.47■■□□□ 1.35
MCM3-206ENST00000596983 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
MCM3-206ENST00000596983 UHRF1BP1Q6BDS2 1440 aa23.42■■□□□ 1.34
MCM3-206ENST00000596983 CCNB3Q8WWL7 1395 aa23.42■■□□□ 1.34
MCM3-206ENST00000596983 PLEKHH2Q8IVE3 1493 aa23.42■■□□□ 1.34
MCM3-206ENST00000596983 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
MCM3-206ENST00000596983 C3P01024 1663 aa23.41■■□□□ 1.34
MCM3-206ENST00000596983 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.34
MCM3-206ENST00000596983 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
MCM3-206ENST00000596983 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
MCM3-206ENST00000596983 ESF1Q9H501 851 aaKnown RBP23.39■■□□□ 1.33
MCM3-206ENST00000596983 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
MCM3-206ENST00000596983 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
MCM3-206ENST00000596983 INO80Q9ULG1 1556 aaPredicted RBP23.38■■□□□ 1.33
MCM3-206ENST00000596983 ATP7AQ04656 1500 aa23.38■■□□□ 1.33
MCM3-206ENST00000596983 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
MCM3-206ENST00000596983 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
MCM3-206ENST00000596983 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
MCM3-206ENST00000596983 PLXNC1O60486 1568 aa23.34■■□□□ 1.33
MCM3-206ENST00000596983 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
MCM3-206ENST00000596983 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
MCM3-206ENST00000596983 A2MP01023 1474 aa23.3■■□□□ 1.32
MCM3-206ENST00000596983 MROH2AA6NES4 1674 aa23.3■■□□□ 1.32
MCM3-206ENST00000596983 CERKQ8TCT0 537 aa23.29■■□□□ 1.32
MCM3-206ENST00000596983 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
MCM3-206ENST00000596983 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
MCM3-206ENST00000596983 DMRT2Q9Y5R5 561 aa23.27■■□□□ 1.32
MCM3-206ENST00000596983 NPATQ14207 1427 aa23.26■■□□□ 1.31
MCM3-206ENST00000596983 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
MCM3-206ENST00000596983 ADGBQ8N7X0 1667 aa23.24■■□□□ 1.31
MCM3-206ENST00000596983 NCOA2Q15596 1464 aa23.23■■□□□ 1.31
MCM3-206ENST00000596983 CLTCQ00610 1675 aaKnown RBP23.22■■□□□ 1.31
MCM3-206ENST00000596983 PTPRTO14522 1441 aa23.22■■□□□ 1.31
MCM3-206ENST00000596983 RTEL1-TNFRSF6BF6WH68 1400 aa23.21■■□□□ 1.31
MCM3-206ENST00000596983 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
MCM3-206ENST00000596983 GGT6Q6P531 493 aa23.19■■□□□ 1.3
MCM3-206ENST00000596983 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
MCM3-206ENST00000596983 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
MCM3-206ENST00000596983 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
MCM3-206ENST00000596983 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
MCM3-206ENST00000596983 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
MCM3-206ENST00000596983 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
MCM3-206ENST00000596983 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.3
MCM3-206ENST00000596983 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
MCM3-206ENST00000596983 ZNF142P52746 1687 aaPredicted RBP23.13■■□□□ 1.29
MCM3-206ENST00000596983 APLP2Q06481 763 aa23.12■■□□□ 1.29
MCM3-206ENST00000596983 CEP170BQ9Y4F5 1589 aaPredicted RBP23.1■■□□□ 1.29
MCM3-206ENST00000596983 ARHGEF5Q12774 1597 aa23.1■■□□□ 1.29
MCM3-206ENST00000596983 RSPH4AQ5TD94 716 aa23.09■■□□□ 1.29
MCM3-206ENST00000596983 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.29
MCM3-206ENST00000596983 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
MCM3-206ENST00000596983 KIF3BO15066 747 aa23.06■■□□□ 1.28
MCM3-206ENST00000596983 KDM5DQ9BY66 1539 aa23.05■■□□□ 1.28
MCM3-206ENST00000596983 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms