RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-208ENST00000596304 KIF14Q15058 1648 aa22.71■■□□□ 1.23
UBA52-208ENST00000596304 SCAPERQ9BY12 1400 aa22.69■■□□□ 1.22
UBA52-208ENST00000596304 POGZQ7Z3K3 1410 aa22.67■■□□□ 1.22
UBA52-208ENST00000596304 PCF11O94913 1555 aaKnown RBP22.67■■□□□ 1.22
UBA52-208ENST00000596304 MAGI2Q86UL8 1455 aa22.66■■□□□ 1.22
UBA52-208ENST00000596304 FER1L4A9Z1Z3 1794 aa22.65■■□□□ 1.22
UBA52-208ENST00000596304 LMTK3Q96Q04 1460 aa22.64■■□□□ 1.21
UBA52-208ENST00000596304 TROQ12816 1431 aaPredicted RBP22.63■■□□□ 1.21
UBA52-208ENST00000596304 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
UBA52-208ENST00000596304 CDC42BPBQ9Y5S2 1711 aa22.6■■□□□ 1.21
UBA52-208ENST00000596304 EFCAB2Q5VUJ9 269 aa22.6■■□□□ 1.21
UBA52-208ENST00000596304 ARHGAP5Q13017 1502 aa22.59■■□□□ 1.21
UBA52-208ENST00000596304 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
UBA52-208ENST00000596304 MLECQ14165 292 aa22.58■■□□□ 1.21
UBA52-208ENST00000596304 CLIP1P30622 1438 aa22.57■■□□□ 1.2
UBA52-208ENST00000596304 ATP10AO60312 1499 aa22.56■■□□□ 1.2
UBA52-208ENST00000596304 C9orf84Q5VXU9 1444 aa22.55■■□□□ 1.2
UBA52-208ENST00000596304 KDM5CP41229 1560 aa22.55■■□□□ 1.2
UBA52-208ENST00000596304 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
UBA52-208ENST00000596304 PREX2Q70Z35 1606 aa22.53■■□□□ 1.2
UBA52-208ENST00000596304 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
UBA52-208ENST00000596304 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
UBA52-208ENST00000596304 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
UBA52-208ENST00000596304 HSPA2P54652 639 aa22.5■■□□□ 1.19
UBA52-208ENST00000596304 CDC42BPAQ5VT25 1732 aa22.49■■□□□ 1.19
UBA52-208ENST00000596304 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
UBA52-208ENST00000596304 DIP2CQ9Y2E4 1556 aa22.49■■□□□ 1.19
UBA52-208ENST00000596304 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
UBA52-208ENST00000596304 ABCA6Q8N139 1617 aa22.47■■□□□ 1.19
UBA52-208ENST00000596304 ABCC1P33527 1531 aa22.47■■□□□ 1.19
UBA52-208ENST00000596304 FBXO41Q8TF61 875 aa22.46■■□□□ 1.19
UBA52-208ENST00000596304 PREX1Q8TCU6 1659 aa22.45■■□□□ 1.18
UBA52-208ENST00000596304 MYT1LQ9UL68 1186 aa22.44■■□□□ 1.18
UBA52-208ENST00000596304 FYCO1Q9BQS8 1478 aa22.43■■□□□ 1.18
UBA52-208ENST00000596304 REREQ9P2R6 1566 aa22.42■■□□□ 1.18
UBA52-208ENST00000596304 TRAPPC8Q9Y2L5 1435 aa22.42■■□□□ 1.18
UBA52-208ENST00000596304 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
UBA52-208ENST00000596304 KIDINS220Q9ULH0 1771 aa22.4■■□□□ 1.18
UBA52-208ENST00000596304 CEBPAP49715 358 aaPredicted RBP22.4■■□□□ 1.18
UBA52-208ENST00000596304 SETD1BQ9UPS6 1966 aaKnown RBP22.38■■□□□ 1.17
UBA52-208ENST00000596304 C3P01024 1663 aa22.36■■□□□ 1.17
UBA52-208ENST00000596304 SAMD9LQ8IVG5 1584 aa22.36■■□□□ 1.17
UBA52-208ENST00000596304 AGLP35573 1532 aa22.34■■□□□ 1.17
UBA52-208ENST00000596304 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
UBA52-208ENST00000596304 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
UBA52-208ENST00000596304 ZNF777Q9ULD5 760 aaPredicted RBP22.31■■□□□ 1.16
UBA52-208ENST00000596304 GPATCH8Q9UKJ3 1502 aaKnown RBP22.31■■□□□ 1.16
UBA52-208ENST00000596304 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
UBA52-208ENST00000596304 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
UBA52-208ENST00000596304 HNRNPMP52272 730 aaKnown RBP eCLIP22.24■■□□□ 1.157e-7■■■■□ 23.6
UBA52-208ENST00000596304 ATP7AQ04656 1500 aa22.22■■□□□ 1.15
UBA52-208ENST00000596304 INO80Q9ULG1 1556 aaPredicted RBP22.22■■□□□ 1.15
UBA52-208ENST00000596304 CERKQ8TCT0 537 aa22.22■■□□□ 1.15
UBA52-208ENST00000596304 ESF1Q9H501 851 aaKnown RBP22.22■■□□□ 1.15
UBA52-208ENST00000596304 MROH2AA6NES4 1674 aa22.21■■□□□ 1.15
UBA52-208ENST00000596304 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
UBA52-208ENST00000596304 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
UBA52-208ENST00000596304 CFDP1Q9UEE9 299 aaPredicted RBP22.2■■□□□ 1.14
UBA52-208ENST00000596304 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.14
UBA52-208ENST00000596304 CNTLNQ9NXG0 1405 aa22.19■■□□□ 1.14
UBA52-208ENST00000596304 KIAA1107Q9UPP5 1409 aa22.19■■□□□ 1.14
UBA52-208ENST00000596304 PLEKHH2Q8IVE3 1493 aa22.19■■□□□ 1.14
UBA52-208ENST00000596304 TIAM1Q13009 1591 aa22.19■■□□□ 1.14
UBA52-208ENST00000596304 PLXNC1O60486 1568 aa22.17■■□□□ 1.14
UBA52-208ENST00000596304 EHBP1L1Q8N3D4 1523 aa22.17■■□□□ 1.14
UBA52-208ENST00000596304 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
UBA52-208ENST00000596304 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.13
UBA52-208ENST00000596304 DMRT2Q9Y5R5 561 aa22.13■■□□□ 1.13
UBA52-208ENST00000596304 A2MP01023 1474 aa22.13■■□□□ 1.13
UBA52-208ENST00000596304 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
UBA52-208ENST00000596304 ZNF644Q9H582 1327 aaPredicted RBP22.11■■□□□ 1.13
UBA52-208ENST00000596304 ZMYM3Q14202 1370 aa22.11■■□□□ 1.13
UBA52-208ENST00000596304 PTPRTO14522 1441 aa22.09■■□□□ 1.13
UBA52-208ENST00000596304 NPATQ14207 1427 aa22.09■■□□□ 1.13
UBA52-208ENST00000596304 MBD5Q9P267 1494 aa22.08■■□□□ 1.12
UBA52-208ENST00000596304 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
UBA52-208ENST00000596304 CAMSAP1Q5T5Y3 1602 aa22.07■■□□□ 1.12
UBA52-208ENST00000596304 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
UBA52-208ENST00000596304 ZNF142P52746 1687 aaPredicted RBP22.06■■□□□ 1.12
UBA52-208ENST00000596304 GGT6Q6P531 493 aa22.05■■□□□ 1.12
UBA52-208ENST00000596304 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
UBA52-208ENST00000596304 NCOA2Q15596 1464 aa22.02■■□□□ 1.12
UBA52-208ENST00000596304 RTEL1-TNFRSF6BF6WH68 1400 aa22.01■■□□□ 1.11
UBA52-208ENST00000596304 PTPRKQ15262 1439 aa22.01■■□□□ 1.11
UBA52-208ENST00000596304 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
UBA52-208ENST00000596304 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
UBA52-208ENST00000596304 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
UBA52-208ENST00000596304 DHX29Q7Z478 1369 aaKnown RBP21.96■■□□□ 1.11
UBA52-208ENST00000596304 NCKAP5LQ9HCH0 1330 aa21.95■■□□□ 1.1
UBA52-208ENST00000596304 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
UBA52-208ENST00000596304 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
UBA52-208ENST00000596304 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
UBA52-208ENST00000596304 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
UBA52-208ENST00000596304 KIF3BO15066 747 aa21.9■■□□□ 1.1
UBA52-208ENST00000596304 DNMT1P26358 1616 aaKnown RBP21.9■■□□□ 1.1
UBA52-208ENST00000596304 IQSEC2Q5JU85 1478 aa21.9■■□□□ 1.1
UBA52-208ENST00000596304 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.1
UBA52-208ENST00000596304 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
UBA52-208ENST00000596304 KDM5DQ9BY66 1539 aa21.89■■□□□ 1.09
UBA52-208ENST00000596304 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms