RNA–Protein interactions for RNA: ENST00000596256.1

FARP1-216, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-216ENST00000596256 ZFYVE16Q7Z3T8 1539 aa24.28■■□□□ 1.48
FARP1-216ENST00000596256 PCF11O94913 1555 aaKnown RBP24.28■■□□□ 1.48
FARP1-216ENST00000596256 SIGLEC1Q9BZZ2 1709 aa24.27■■□□□ 1.48
FARP1-216ENST00000596256 POGZQ7Z3K3 1410 aa24.26■■□□□ 1.47
FARP1-216ENST00000596256 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
FARP1-216ENST00000596256 MAGI2Q86UL8 1455 aa24.25■■□□□ 1.47
FARP1-216ENST00000596256 CLIP1P30622 1438 aa24.24■■□□□ 1.47
FARP1-216ENST00000596256 CASKIN1Q8WXD9 1431 aa24.24■■□□□ 1.47
FARP1-216ENST00000596256 RIMS1Q86UR5 1692 aaKnown RBP24.23■■□□□ 1.47
FARP1-216ENST00000596256 ARHGAP5Q13017 1502 aa24.2■■□□□ 1.47
FARP1-216ENST00000596256 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
FARP1-216ENST00000596256 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
FARP1-216ENST00000596256 FYCO1Q9BQS8 1478 aa24.14■■□□□ 1.46
FARP1-216ENST00000596256 PREX2Q70Z35 1606 aa24.14■■□□□ 1.46
FARP1-216ENST00000596256 ATP10AO60312 1499 aa24.13■■□□□ 1.45
FARP1-216ENST00000596256 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
FARP1-216ENST00000596256 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
FARP1-216ENST00000596256 KDM5CP41229 1560 aa24.12■■□□□ 1.45
FARP1-216ENST00000596256 MLECQ14165 292 aa24.11■■□□□ 1.45
FARP1-216ENST00000596256 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
FARP1-216ENST00000596256 FER1L4A9Z1Z3 1794 aa24.11■■□□□ 1.45
FARP1-216ENST00000596256 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
FARP1-216ENST00000596256 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
FARP1-216ENST00000596256 LMTK3Q96Q04 1460 aa24.08■■□□□ 1.45
FARP1-216ENST00000596256 PLPPR3Q6T4P5 718 aa24.07■■□□□ 1.44
FARP1-216ENST00000596256 ABCC1P33527 1531 aa24.06■■□□□ 1.44
FARP1-216ENST00000596256 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
FARP1-216ENST00000596256 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
FARP1-216ENST00000596256 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
FARP1-216ENST00000596256 TRAPPC8Q9Y2L5 1435 aa24.03■■□□□ 1.44
FARP1-216ENST00000596256 MYT1LQ9UL68 1186 aa24.02■■□□□ 1.44
FARP1-216ENST00000596256 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
FARP1-216ENST00000596256 MLH3Q9UHC1 1453 aa24.01■■□□□ 1.43
FARP1-216ENST00000596256 REREQ9P2R6 1566 aa23.99■■□□□ 1.43
FARP1-216ENST00000596256 SAMD9LQ8IVG5 1584 aa23.97■■□□□ 1.43
FARP1-216ENST00000596256 GPATCH8Q9UKJ3 1502 aaKnown RBP23.97■■□□□ 1.43
FARP1-216ENST00000596256 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
FARP1-216ENST00000596256 HSPA2P54652 639 aa23.95■■□□□ 1.42
FARP1-216ENST00000596256 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
FARP1-216ENST00000596256 CEBPAP49715 358 aaPredicted RBP23.92■■□□□ 1.42
FARP1-216ENST00000596256 SYCP2Q9BX26 1530 aa23.91■■□□□ 1.42
FARP1-216ENST00000596256 AGLP35573 1532 aa23.9■■□□□ 1.42
FARP1-216ENST00000596256 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
FARP1-216ENST00000596256 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
FARP1-216ENST00000596256 PREX1Q8TCU6 1659 aa23.89■■□□□ 1.41
FARP1-216ENST00000596256 CCNB3Q8WWL7 1395 aa23.88■■□□□ 1.41
FARP1-216ENST00000596256 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
FARP1-216ENST00000596256 CFDP1Q9UEE9 299 aaPredicted RBP23.86■■□□□ 1.41
FARP1-216ENST00000596256 C3P01024 1663 aa23.84■■□□□ 1.41
FARP1-216ENST00000596256 EHBP1L1Q8N3D4 1523 aa23.84■■□□□ 1.41
FARP1-216ENST00000596256 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
FARP1-216ENST00000596256 TIAM1Q13009 1591 aa23.83■■□□□ 1.41
FARP1-216ENST00000596256 SPAG9O60271 1321 aaKnown RBP23.83■■□□□ 1.4
FARP1-216ENST00000596256 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
FARP1-216ENST00000596256 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
FARP1-216ENST00000596256 ATP7AQ04656 1500 aa23.8■■□□□ 1.4
FARP1-216ENST00000596256 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
FARP1-216ENST00000596256 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
FARP1-216ENST00000596256 FBXO41Q8TF61 875 aa23.79■■□□□ 1.4
FARP1-216ENST00000596256 ESF1Q9H501 851 aaKnown RBP23.77■■□□□ 1.4
FARP1-216ENST00000596256 ZNF644Q9H582 1327 aaPredicted RBP23.77■■□□□ 1.4
FARP1-216ENST00000596256 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
FARP1-216ENST00000596256 PLXNC1O60486 1568 aa23.74■■□□□ 1.39
FARP1-216ENST00000596256 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
FARP1-216ENST00000596256 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
FARP1-216ENST00000596256 CNTLNQ9NXG0 1405 aa23.73■■□□□ 1.39
FARP1-216ENST00000596256 A2MP01023 1474 aa23.72■■□□□ 1.39
FARP1-216ENST00000596256 MBD5Q9P267 1494 aa23.72■■□□□ 1.39
FARP1-216ENST00000596256 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
FARP1-216ENST00000596256 ADGBQ8N7X0 1667 aa23.7■■□□□ 1.38
FARP1-216ENST00000596256 NCOA2Q15596 1464 aa23.69■■□□□ 1.38
FARP1-216ENST00000596256 CLTCQ00610 1675 aaKnown RBP23.67■■□□□ 1.38
FARP1-216ENST00000596256 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
FARP1-216ENST00000596256 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
FARP1-216ENST00000596256 CAMSAP2Q08AD1 1489 aa23.63■■□□□ 1.37
FARP1-216ENST00000596256 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
FARP1-216ENST00000596256 GGT6Q6P531 493 aa23.62■■□□□ 1.37
FARP1-216ENST00000596256 NPATQ14207 1427 aa23.61■■□□□ 1.37
FARP1-216ENST00000596256 CERKQ8TCT0 537 aa23.61■■□□□ 1.37
FARP1-216ENST00000596256 DMRT2Q9Y5R5 561 aa23.6■■□□□ 1.37
FARP1-216ENST00000596256 CCDC141Q6ZP82 1450 aa23.6■■□□□ 1.37
FARP1-216ENST00000596256 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
FARP1-216ENST00000596256 DHX29Q7Z478 1369 aaKnown RBP23.56■■□□□ 1.36
FARP1-216ENST00000596256 ARHGEF5Q12774 1597 aa23.54■■□□□ 1.36
FARP1-216ENST00000596256 PTPRTO14522 1441 aa23.54■■□□□ 1.36
FARP1-216ENST00000596256 PTPRKQ15262 1439 aa23.54■■□□□ 1.36
FARP1-216ENST00000596256 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
FARP1-216ENST00000596256 NCOA1Q15788 1441 aa23.53■■□□□ 1.36
FARP1-216ENST00000596256 MYO3AQ8NEV4 1616 aa23.53■■□□□ 1.36
FARP1-216ENST00000596256 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
FARP1-216ENST00000596256 MAP3K1Q13233 1512 aa23.53■■□□□ 1.36
FARP1-216ENST00000596256 CAMSAP1Q5T5Y3 1602 aa23.52■■□□□ 1.36
FARP1-216ENST00000596256 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
FARP1-216ENST00000596256 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
FARP1-216ENST00000596256 KIF3BO15066 747 aa23.49■■□□□ 1.35
FARP1-216ENST00000596256 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
FARP1-216ENST00000596256 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
FARP1-216ENST00000596256 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
FARP1-216ENST00000596256 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
FARP1-216ENST00000596256 MYOM3Q5VTT5 1437 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms