RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 MLECQ14165 292 aa27.64■■■□□ 2.02
CCDC9-202ENST00000595659 ZFYVE16Q7Z3T8 1539 aa27.63■■■□□ 2.01
CCDC9-202ENST00000595659 PLPPR3Q6T4P5 718 aa27.63■■■□□ 2.01
CCDC9-202ENST00000595659 ZMYM4Q5VZL5 1548 aa27.62■■■□□ 2.01
CCDC9-202ENST00000595659 BCORL1Q5H9F3 1711 aa27.61■■■□□ 2.01
CCDC9-202ENST00000595659 LRRIQ1Q96JM4 1722 aa27.61■■■□□ 2.01
CCDC9-202ENST00000595659 AFAP1Q8N556 730 aa27.61■■■□□ 2.01
CCDC9-202ENST00000595659 ARHGAP5Q13017 1502 aa27.61■■■□□ 2.01
CCDC9-202ENST00000595659 MAGI2Q86UL8 1455 aa27.59■■■□□ 2.01
CCDC9-202ENST00000595659 MADDQ8WXG6 1647 aa27.59■■■□□ 2.01
CCDC9-202ENST00000595659 CCDC18Q5T9S5 1454 aa27.58■■■□□ 2.01
CCDC9-202ENST00000595659 MYT1LQ9UL68 1186 aa27.57■■■□□ 2
CCDC9-202ENST00000595659 MYO5CQ9NQX4 1742 aa27.57■■■□□ 2
CCDC9-202ENST00000595659 FYCO1Q9BQS8 1478 aa27.53■■■□□ 2
CCDC9-202ENST00000595659 SIGLEC1Q9BZZ2 1709 aa27.51■■□□□ 1.99
CCDC9-202ENST00000595659 ATP10AO60312 1499 aa27.51■■□□□ 1.99
CCDC9-202ENST00000595659 ILDR1Q86SU0 546 aaPredicted RBP27.5■■□□□ 1.99
CCDC9-202ENST00000595659 ZNF518AQ6AHZ1 1483 aa27.49■■□□□ 1.99
CCDC9-202ENST00000595659 RIMS1Q86UR5 1692 aaKnown RBP27.47■■□□□ 1.99
CCDC9-202ENST00000595659 ZNF777Q9ULD5 760 aaPredicted RBP27.47■■□□□ 1.99
CCDC9-202ENST00000595659 C9orf84Q5VXU9 1444 aa27.47■■□□□ 1.99
CCDC9-202ENST00000595659 TRAPPC8Q9Y2L5 1435 aa27.45■■□□□ 1.98
CCDC9-202ENST00000595659 ARHGEF12Q9NZN5 1544 aa27.44■■□□□ 1.98
CCDC9-202ENST00000595659 CDC42BPBQ9Y5S2 1711 aa27.42■■□□□ 1.98
CCDC9-202ENST00000595659 KDM5CP41229 1560 aa27.39■■□□□ 1.98
CCDC9-202ENST00000595659 PREX2Q70Z35 1606 aa27.39■■□□□ 1.98
CCDC9-202ENST00000595659 HSPA2P54652 639 aa27.39■■□□□ 1.98
CCDC9-202ENST00000595659 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
CCDC9-202ENST00000595659 ABCC1P33527 1531 aa27.37■■□□□ 1.97
CCDC9-202ENST00000595659 CEBPAP49715 358 aaPredicted RBP27.37■■□□□ 1.97
CCDC9-202ENST00000595659 GPATCH8Q9UKJ3 1502 aaKnown RBP27.36■■□□□ 1.97
CCDC9-202ENST00000595659 CEP162Q5TB80 1403 aa27.36■■□□□ 1.97
CCDC9-202ENST00000595659 HNRNPMP52272 730 aaKnown RBP eCLIP27.36■■□□□ 1.97
CCDC9-202ENST00000595659 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
CCDC9-202ENST00000595659 MLH3Q9UHC1 1453 aa27.34■■□□□ 1.97
CCDC9-202ENST00000595659 LOC105371045A0A1W2PR82 267 aa27.34■■□□□ 1.97
CCDC9-202ENST00000595659 CFDP1Q9UEE9 299 aaPredicted RBP27.34■■□□□ 1.97
CCDC9-202ENST00000595659 DIP2CQ9Y2E4 1556 aa27.32■■□□□ 1.96
CCDC9-202ENST00000595659 CCNB3Q8WWL7 1395 aa27.32■■□□□ 1.96
CCDC9-202ENST00000595659 CDC42BPAQ5VT25 1732 aa27.31■■□□□ 1.96
CCDC9-202ENST00000595659 ABCA6Q8N139 1617 aa27.28■■□□□ 1.96
CCDC9-202ENST00000595659 FER1L4A9Z1Z3 1794 aa27.27■■□□□ 1.96
CCDC9-202ENST00000595659 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
CCDC9-202ENST00000595659 SAMD9LQ8IVG5 1584 aa27.27■■□□□ 1.96
CCDC9-202ENST00000595659 SPAG9O60271 1321 aaKnown RBP27.26■■□□□ 1.95
CCDC9-202ENST00000595659 SYCP2Q9BX26 1530 aa27.26■■□□□ 1.95
CCDC9-202ENST00000595659 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
CCDC9-202ENST00000595659 ESF1Q9H501 851 aaKnown RBP27.22■■□□□ 1.95
CCDC9-202ENST00000595659 REREQ9P2R6 1566 aa27.21■■□□□ 1.95
CCDC9-202ENST00000595659 KIAA1107Q9UPP5 1409 aa27.19■■□□□ 1.94
CCDC9-202ENST00000595659 KIDINS220Q9ULH0 1771 aa27.19■■□□□ 1.94
CCDC9-202ENST00000595659 AGLP35573 1532 aa27.17■■□□□ 1.94
CCDC9-202ENST00000595659 PLEKHH2Q8IVE3 1493 aa27.16■■□□□ 1.94
CCDC9-202ENST00000595659 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
CCDC9-202ENST00000595659 TIAM1Q13009 1591 aa27.13■■□□□ 1.93
CCDC9-202ENST00000595659 FBXO41Q8TF61 875 aa27.09■■□□□ 1.93
CCDC9-202ENST00000595659 ATP7AQ04656 1500 aa27.09■■□□□ 1.93
CCDC9-202ENST00000595659 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
CCDC9-202ENST00000595659 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
CCDC9-202ENST00000595659 MBD5Q9P267 1494 aa27.06■■□□□ 1.92
CCDC9-202ENST00000595659 GGT6Q6P531 493 aa27.06■■□□□ 1.92
CCDC9-202ENST00000595659 A2MP01023 1474 aa27.06■■□□□ 1.92
CCDC9-202ENST00000595659 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
CCDC9-202ENST00000595659 CNTLNQ9NXG0 1405 aa27.03■■□□□ 1.92
CCDC9-202ENST00000595659 INO80Q9ULG1 1556 aaPredicted RBP27.03■■□□□ 1.92
CCDC9-202ENST00000595659 PREX1Q8TCU6 1659 aa27.02■■□□□ 1.92
CCDC9-202ENST00000595659 ZMYM3Q14202 1370 aa27.01■■□□□ 1.91
CCDC9-202ENST00000595659 C3P01024 1663 aa27.01■■□□□ 1.91
CCDC9-202ENST00000595659 SUPT6HQ7KZ85 1726 aaKnown RBP27■■□□□ 1.91
CCDC9-202ENST00000595659 KANK4Q5T7N3 995 aaPredicted RBP27■■□□□ 1.91
CCDC9-202ENST00000595659 PLXNC1O60486 1568 aa26.96■■□□□ 1.91
CCDC9-202ENST00000595659 CAMSAP2Q08AD1 1489 aa26.95■■□□□ 1.91
CCDC9-202ENST00000595659 LRRC9Q6ZRR7 1453 aa26.95■■□□□ 1.91
CCDC9-202ENST00000595659 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
CCDC9-202ENST00000595659 CERKQ8TCT0 537 aa26.94■■□□□ 1.9
CCDC9-202ENST00000595659 DMRT2Q9Y5R5 561 aa26.92■■□□□ 1.9
CCDC9-202ENST00000595659 DHX29Q7Z478 1369 aaKnown RBP26.92■■□□□ 1.9
CCDC9-202ENST00000595659 CCDC141Q6ZP82 1450 aa26.92■■□□□ 1.9
CCDC9-202ENST00000595659 KIF3BO15066 747 aa26.91■■□□□ 1.9
CCDC9-202ENST00000595659 RSPH4AQ5TD94 716 aa26.91■■□□□ 1.9
CCDC9-202ENST00000595659 NPATQ14207 1427 aa26.89■■□□□ 1.89
CCDC9-202ENST00000595659 TSPY4P0CV99 314 aa26.88■■□□□ 1.89
CCDC9-202ENST00000595659 TSPY10P0CW01 314 aa26.88■■□□□ 1.89
CCDC9-202ENST00000595659 PPP6R1Q9UPN7 881 aa26.87■■□□□ 1.89
CCDC9-202ENST00000595659 SETD1BQ9UPS6 1966 aaKnown RBP26.87■■□□□ 1.89
CCDC9-202ENST00000595659 STRCQ7RTU9 1775 aa26.86■■□□□ 1.89
CCDC9-202ENST00000595659 CLTCQ00610 1675 aaKnown RBP26.85■■□□□ 1.89
CCDC9-202ENST00000595659 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
CCDC9-202ENST00000595659 PTPRKQ15262 1439 aa26.84■■□□□ 1.89
CCDC9-202ENST00000595659 MROH2AA6NES4 1674 aa26.82■■□□□ 1.88
CCDC9-202ENST00000595659 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
CCDC9-202ENST00000595659 MAP3K1Q13233 1512 aa26.8■■□□□ 1.88
CCDC9-202ENST00000595659 APLP2Q06481 763 aa26.8■■□□□ 1.88
CCDC9-202ENST00000595659 NCOA1Q15788 1441 aa26.8■■□□□ 1.88
CCDC9-202ENST00000595659 FBXO31Q5XUX0 539 aaPredicted RBP26.79■■□□□ 1.88
CCDC9-202ENST00000595659 PTPRTO14522 1441 aa26.79■■□□□ 1.88
CCDC9-202ENST00000595659 ARHGEF5Q12774 1597 aa26.77■■□□□ 1.88
CCDC9-202ENST00000595659 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
CCDC9-202ENST00000595659 WASHC2CQ9Y4E1 1318 aa26.77■■□□□ 1.88
CCDC9-202ENST00000595659 CAMSAP1Q5T5Y3 1602 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms