RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
CCDC9-202ENST00000595659 ABCC9O60706 1549 aa37.77■■■■□ 3.64
CCDC9-202ENST00000595659 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
CCDC9-202ENST00000595659 DCAF8L2P0C7V8 631 aa35.87■■■■□ 3.33
CCDC9-202ENST00000595659 RB1CC1Q8TDY2 1594 aa35.86■■■■□ 3.33
CCDC9-202ENST00000595659 NACADO15069 1562 aa35.66■■■■□ 3.3
CCDC9-202ENST00000595659 DNAJC5BQ9UF47 199 aa35.37■■■■□ 3.25
CCDC9-202ENST00000595659 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
CCDC9-202ENST00000595659 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
CCDC9-202ENST00000595659 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
CCDC9-202ENST00000595659 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
CCDC9-202ENST00000595659 BICRAQ9NZM4 1560 aa34.85■■■■□ 3.17
CCDC9-202ENST00000595659 DCAF1Q9Y4B6 1507 aa34.81■■■■□ 3.16
CCDC9-202ENST00000595659 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
CCDC9-202ENST00000595659 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
CCDC9-202ENST00000595659 CC2D2AQ9P2K1 1620 aa34.01■■■■□ 3.04
CCDC9-202ENST00000595659 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
CCDC9-202ENST00000595659 CECR2Q9BXF3 1484 aa33.96■■■■□ 3.03
CCDC9-202ENST00000595659 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
CCDC9-202ENST00000595659 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
CCDC9-202ENST00000595659 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
CCDC9-202ENST00000595659 SMARCA2P51531 1590 aa32.78■■■□□ 2.84
CCDC9-202ENST00000595659 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
CCDC9-202ENST00000595659 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
CCDC9-202ENST00000595659 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
CCDC9-202ENST00000595659 MROH2BQ7Z745 1585 aa32.61■■■□□ 2.81
CCDC9-202ENST00000595659 ERCC6Q03468 1493 aa32.57■■■□□ 2.8
CCDC9-202ENST00000595659 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
CCDC9-202ENST00000595659 NESP48681 1621 aa32.49■■■□□ 2.79
CCDC9-202ENST00000595659 CUX2O14529 1486 aa32.35■■■□□ 2.77
CCDC9-202ENST00000595659 DNAJC5Q9H3Z4 198 aa32.27■■■□□ 2.76
CCDC9-202ENST00000595659 WIZO95785 1651 aa32.18■■■□□ 2.74
CCDC9-202ENST00000595659 LAMC3Q9Y6N6 1575 aa32.14■■■□□ 2.74
CCDC9-202ENST00000595659 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
CCDC9-202ENST00000595659 CADPSQ9ULU8 1353 aa32.05■■■□□ 2.72
CCDC9-202ENST00000595659 RSF1Q96T23 1441 aaPredicted RBP32.02■■■□□ 2.72
CCDC9-202ENST00000595659 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
CCDC9-202ENST00000595659 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
CCDC9-202ENST00000595659 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
CCDC9-202ENST00000595659 MRC2Q9UBG0 1479 aa31.74■■■□□ 2.67
CCDC9-202ENST00000595659 CFTRP13569 1480 aa31.67■■■□□ 2.66
CCDC9-202ENST00000595659 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
CCDC9-202ENST00000595659 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
CCDC9-202ENST00000595659 WDR62O43379 1518 aa31.6■■■□□ 2.65
CCDC9-202ENST00000595659 CCDC88BA6NC98 1476 aa31.49■■■□□ 2.63
CCDC9-202ENST00000595659 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.62
CCDC9-202ENST00000595659 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
CCDC9-202ENST00000595659 TOPBP1Q92547 1522 aa31.07■■■□□ 2.56
CCDC9-202ENST00000595659 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
CCDC9-202ENST00000595659 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
CCDC9-202ENST00000595659 ZNF608Q9ULD9 1512 aaPredicted RBP31.02■■■□□ 2.56
CCDC9-202ENST00000595659 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
CCDC9-202ENST00000595659 ABCC8Q09428 1581 aa30.95■■■□□ 2.54
CCDC9-202ENST00000595659 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
CCDC9-202ENST00000595659 SUPT5HO00267 1087 aaKnown RBP30.91■■■□□ 2.54
CCDC9-202ENST00000595659 AQRO60306 1485 aaKnown RBP eCLIP30.79■■■□□ 2.521e-7■■■■□ 21.1
CCDC9-202ENST00000595659 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
CCDC9-202ENST00000595659 RAD54L2Q9Y4B4 1467 aa30.73■■■□□ 2.51
CCDC9-202ENST00000595659 EIF4G3O43432 1585 aaKnown RBP30.73■■■□□ 2.51
CCDC9-202ENST00000595659 TARBP1Q13395 1621 aaKnown RBP30.71■■■□□ 2.51
CCDC9-202ENST00000595659 SOGA1O94964 1423 aa30.69■■■□□ 2.5
CCDC9-202ENST00000595659 TDRD9Q8NDG6 1382 aaKnown RBP30.66■■■□□ 2.5
CCDC9-202ENST00000595659 FBLN2P98095 1184 aa30.64■■■□□ 2.5
CCDC9-202ENST00000595659 FGD5Q6ZNL6 1462 aa30.62■■■□□ 2.49
CCDC9-202ENST00000595659 CUX1P39880 1505 aa30.62■■■□□ 2.49
CCDC9-202ENST00000595659 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
CCDC9-202ENST00000595659 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
CCDC9-202ENST00000595659 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
CCDC9-202ENST00000595659 ARHGEF11O15085 1522 aa30.45■■■□□ 2.47
CCDC9-202ENST00000595659 SNAPC4Q5SXM2 1469 aa30.43■■■□□ 2.46
CCDC9-202ENST00000595659 CHD1O14646 1710 aa30.42■■■□□ 2.46
CCDC9-202ENST00000595659 CYB5RLQ6IPT4 315 aa30.38■■■□□ 2.45
CCDC9-202ENST00000595659 CHMP7Q8WUX9 453 aaPredicted RBP30.38■■■□□ 2.45
CCDC9-202ENST00000595659 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
CCDC9-202ENST00000595659 WDR97A6NE52 1622 aa30.3■■■□□ 2.44
CCDC9-202ENST00000595659 GAPVD1Q14C86 1478 aa30.28■■■□□ 2.44
CCDC9-202ENST00000595659 MAGI1Q96QZ7 1491 aaPredicted RBP30.28■■■□□ 2.44
CCDC9-202ENST00000595659 ABCA10Q8WWZ4 1543 aa30.23■■■□□ 2.43
CCDC9-202ENST00000595659 SYNJ2O15056 1496 aa30.2■■■□□ 2.43
CCDC9-202ENST00000595659 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.42
CCDC9-202ENST00000595659 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
CCDC9-202ENST00000595659 CLASP1Q7Z460 1538 aa30.13■■■□□ 2.41
CCDC9-202ENST00000595659 SYNJ1O43426 1573 aa30.12■■■□□ 2.41
CCDC9-202ENST00000595659 ABCA5Q8WWZ7 1642 aa30.11■■■□□ 2.41
CCDC9-202ENST00000595659 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
CCDC9-202ENST00000595659 TOP2BQ02880 1626 aa30.09■■■□□ 2.41
CCDC9-202ENST00000595659 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
CCDC9-202ENST00000595659 TRHP20396 242 aaPredicted RBP30■■■□□ 2.39
CCDC9-202ENST00000595659 GRIN2AQ12879 1464 aa29.94■■■□□ 2.38
CCDC9-202ENST00000595659 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
CCDC9-202ENST00000595659 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.38
CCDC9-202ENST00000595659 NUP160Q12769 1436 aa29.84■■■□□ 2.37
CCDC9-202ENST00000595659 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
CCDC9-202ENST00000595659 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
CCDC9-202ENST00000595659 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
CCDC9-202ENST00000595659 JPH4Q96JJ6 628 aa29.64■■■□□ 2.34
CCDC9-202ENST00000595659 IGF1RP08069 1367 aa29.63■■■□□ 2.33
CCDC9-202ENST00000595659 KIF27Q86VH2 1401 aa29.61■■■□□ 2.33
CCDC9-202ENST00000595659 PRG4Q92954 1404 aaPredicted RBP29.6■■■□□ 2.33
CCDC9-202ENST00000595659 SHROOM2Q13796 1616 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms