RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 TROQ12816 1431 aaPredicted RBP29.22■■■□□ 2.27
CIRBP-243ENST00000593128 ZMYM4Q5VZL5 1548 aa29.2■■■□□ 2.27
CIRBP-243ENST00000593128 EFCAB2Q5VUJ9 269 aa29.2■■■□□ 2.26
CIRBP-243ENST00000593128 ARHGAP5Q13017 1502 aa29.19■■■□□ 2.26
CIRBP-243ENST00000593128 YEATS2Q9ULM3 1422 aa29.19■■■□□ 2.26
CIRBP-243ENST00000593128 PLPPR3Q6T4P5 718 aa29.18■■■□□ 2.26
CIRBP-243ENST00000593128 POGZQ7Z3K3 1410 aa29.18■■■□□ 2.26
CIRBP-243ENST00000593128 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
CIRBP-243ENST00000593128 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
CIRBP-243ENST00000593128 CCDC18Q5T9S5 1454 aa29.13■■■□□ 2.25
CIRBP-243ENST00000593128 MLECQ14165 292 aa29.13■■■□□ 2.25
CIRBP-243ENST00000593128 MAGI2Q86UL8 1455 aa29.12■■■□□ 2.25
CIRBP-243ENST00000593128 SIGLEC1Q9BZZ2 1709 aa29.12■■■□□ 2.25
CIRBP-243ENST00000593128 MYT1LQ9UL68 1186 aa29.12■■■□□ 2.25
CIRBP-243ENST00000593128 CDC42BPBQ9Y5S2 1711 aa29.07■■■□□ 2.24
CIRBP-243ENST00000593128 FYCO1Q9BQS8 1478 aa29.05■■■□□ 2.24
CIRBP-243ENST00000593128 ZNF518AQ6AHZ1 1483 aa29.04■■■□□ 2.24
CIRBP-243ENST00000593128 PREX2Q70Z35 1606 aa29.03■■■□□ 2.24
CIRBP-243ENST00000593128 AFAP1Q8N556 730 aa29.03■■■□□ 2.24
CIRBP-243ENST00000593128 ILDR1Q86SU0 546 aaPredicted RBP29.02■■■□□ 2.24
CIRBP-243ENST00000593128 FER1L4A9Z1Z3 1794 aa29.02■■■□□ 2.24
CIRBP-243ENST00000593128 ATP10AO60312 1499 aa29.02■■■□□ 2.24
CIRBP-243ENST00000593128 C9orf84Q5VXU9 1444 aa29■■■□□ 2.23
CIRBP-243ENST00000593128 CDC42BPAQ5VT25 1732 aa28.97■■■□□ 2.23
CIRBP-243ENST00000593128 KDM5CP41229 1560 aa28.95■■■□□ 2.22
CIRBP-243ENST00000593128 ZNF777Q9ULD5 760 aaPredicted RBP28.94■■■□□ 2.22
CIRBP-243ENST00000593128 ABCC1P33527 1531 aa28.94■■■□□ 2.22
CIRBP-243ENST00000593128 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
CIRBP-243ENST00000593128 LMTK3Q96Q04 1460 aa28.92■■■□□ 2.22
CIRBP-243ENST00000593128 TRAPPC8Q9Y2L5 1435 aa28.9■■■□□ 2.22
CIRBP-243ENST00000593128 ARHGEF12Q9NZN5 1544 aa28.89■■■□□ 2.22
CIRBP-243ENST00000593128 DIP2CQ9Y2E4 1556 aa28.89■■■□□ 2.22
CIRBP-243ENST00000593128 ABCA6Q8N139 1617 aa28.88■■■□□ 2.21
CIRBP-243ENST00000593128 HSPA2P54652 639 aa28.86■■■□□ 2.21
CIRBP-243ENST00000593128 MTUS2Q5JR59 1369 aa28.84■■■□□ 2.21
CIRBP-243ENST00000593128 MLH3Q9UHC1 1453 aa28.83■■■□□ 2.21
CIRBP-243ENST00000593128 SAMD9LQ8IVG5 1584 aa28.82■■■□□ 2.2
CIRBP-243ENST00000593128 GPATCH8Q9UKJ3 1502 aaKnown RBP28.81■■■□□ 2.2
CIRBP-243ENST00000593128 CEP162Q5TB80 1403 aa28.81■■■□□ 2.2
CIRBP-243ENST00000593128 CEBPAP49715 358 aaPredicted RBP28.81■■■□□ 2.2
CIRBP-243ENST00000593128 SYCP2Q9BX26 1530 aa28.8■■■□□ 2.2
CIRBP-243ENST00000593128 CCNB3Q8WWL7 1395 aa28.79■■■□□ 2.2
CIRBP-243ENST00000593128 KIDINS220Q9ULH0 1771 aa28.78■■■□□ 2.2
CIRBP-243ENST00000593128 HNRNPMP52272 730 aaKnown RBP eCLIP28.77■■■□□ 2.2
CIRBP-243ENST00000593128 CFDP1Q9UEE9 299 aaPredicted RBP28.77■■■□□ 2.2
CIRBP-243ENST00000593128 REREQ9P2R6 1566 aa28.76■■■□□ 2.19
CIRBP-243ENST00000593128 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
CIRBP-243ENST00000593128 PREX1Q8TCU6 1659 aa28.73■■■□□ 2.19
CIRBP-243ENST00000593128 SPAG9O60271 1321 aaKnown RBP28.72■■■□□ 2.19
CIRBP-243ENST00000593128 EHBP1L1Q8N3D4 1523 aa28.69■■■□□ 2.18
CIRBP-243ENST00000593128 AGLP35573 1532 aa28.69■■■□□ 2.18
CIRBP-243ENST00000593128 PLEKHH2Q8IVE3 1493 aa28.67■■■□□ 2.18
CIRBP-243ENST00000593128 SUPT6HQ7KZ85 1726 aaKnown RBP28.67■■■□□ 2.18
CIRBP-243ENST00000593128 TIAM1Q13009 1591 aa28.67■■■□□ 2.18
CIRBP-243ENST00000593128 C3P01024 1663 aa28.66■■■□□ 2.18
CIRBP-243ENST00000593128 ATP7AQ04656 1500 aa28.64■■■□□ 2.18
CIRBP-243ENST00000593128 LOC105371045A0A1W2PR82 267 aa28.64■■■□□ 2.18
CIRBP-243ENST00000593128 KIAA1107Q9UPP5 1409 aa28.62■■■□□ 2.17
CIRBP-243ENST00000593128 ZNF644Q9H582 1327 aaPredicted RBP28.62■■■□□ 2.17
CIRBP-243ENST00000593128 UHRF1BP1Q6BDS2 1440 aa28.61■■■□□ 2.17
CIRBP-243ENST00000593128 INO80Q9ULG1 1556 aaPredicted RBP28.6■■■□□ 2.17
CIRBP-243ENST00000593128 FBXO41Q8TF61 875 aa28.6■■■□□ 2.17
CIRBP-243ENST00000593128 A2MP01023 1474 aa28.55■■■□□ 2.16
CIRBP-243ENST00000593128 CNTLNQ9NXG0 1405 aa28.54■■■□□ 2.16
CIRBP-243ENST00000593128 SETD1BQ9UPS6 1966 aaKnown RBP28.54■■■□□ 2.16
CIRBP-243ENST00000593128 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
CIRBP-243ENST00000593128 CLTCQ00610 1675 aaKnown RBP28.51■■■□□ 2.15
CIRBP-243ENST00000593128 ADGBQ8N7X0 1667 aa28.51■■■□□ 2.15
CIRBP-243ENST00000593128 GGT6Q6P531 493 aa28.5■■■□□ 2.15
CIRBP-243ENST00000593128 PLXNC1O60486 1568 aa28.5■■■□□ 2.15
CIRBP-243ENST00000593128 STRCQ7RTU9 1775 aa28.48■■■□□ 2.15
CIRBP-243ENST00000593128 MROH2AA6NES4 1674 aa28.48■■■□□ 2.15
CIRBP-243ENST00000593128 MBD5Q9P267 1494 aa28.47■■■□□ 2.15
CIRBP-243ENST00000593128 VPS8Q8N3P4 1428 aa28.47■■■□□ 2.15
CIRBP-243ENST00000593128 CAMSAP2Q08AD1 1489 aa28.46■■■□□ 2.15
CIRBP-243ENST00000593128 ZMYM3Q14202 1370 aa28.44■■■□□ 2.14
CIRBP-243ENST00000593128 DMRT2Q9Y5R5 561 aa28.42■■■□□ 2.14
CIRBP-243ENST00000593128 CERKQ8TCT0 537 aa28.41■■■□□ 2.14
CIRBP-243ENST00000593128 CCDC141Q6ZP82 1450 aa28.4■■■□□ 2.14
CIRBP-243ENST00000593128 LRRC9Q6ZRR7 1453 aa28.39■■■□□ 2.13
CIRBP-243ENST00000593128 RTEL1-TNFRSF6BF6WH68 1400 aa28.38■■■□□ 2.13
CIRBP-243ENST00000593128 NPATQ14207 1427 aa28.36■■■□□ 2.13
CIRBP-243ENST00000593128 DHX29Q7Z478 1369 aaKnown RBP28.33■■■□□ 2.13
CIRBP-243ENST00000593128 KIF3BO15066 747 aa28.32■■■□□ 2.12
CIRBP-243ENST00000593128 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
CIRBP-243ENST00000593128 CAMSAP1Q5T5Y3 1602 aa28.32■■■□□ 2.12
CIRBP-243ENST00000593128 MYO3AQ8NEV4 1616 aa28.32■■■□□ 2.12
CIRBP-243ENST00000593128 TSPY4P0CV99 314 aa28.31■■■□□ 2.12
CIRBP-243ENST00000593128 TSPY10P0CW01 314 aa28.31■■■□□ 2.12
CIRBP-243ENST00000593128 RSPH4AQ5TD94 716 aa28.31■■■□□ 2.12
CIRBP-243ENST00000593128 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
CIRBP-243ENST00000593128 PTPRKQ15262 1439 aa28.28■■■□□ 2.12
CIRBP-243ENST00000593128 NCOA1Q15788 1441 aa28.28■■■□□ 2.12
CIRBP-243ENST00000593128 PPP6R1Q9UPN7 881 aa28.27■■■□□ 2.12
CIRBP-243ENST00000593128 PTPRTO14522 1441 aa28.26■■■□□ 2.12
CIRBP-243ENST00000593128 NCKAP5LQ9HCH0 1330 aa28.24■■■□□ 2.11
CIRBP-243ENST00000593128 MAP3K1Q13233 1512 aa28.24■■■□□ 2.11
CIRBP-243ENST00000593128 APLP2Q06481 763 aa28.24■■■□□ 2.11
CIRBP-243ENST00000593128 CEP170BQ9Y4F5 1589 aaPredicted RBP28.24■■■□□ 2.11
CIRBP-243ENST00000593128 ZNF142P52746 1687 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms