RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 LRRC9Q6ZRR7 1453 aa18.81■□□□□ 0.6
H3F3B-212ENST00000592643 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
H3F3B-212ENST00000592643 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
H3F3B-212ENST00000592643 PREX2Q70Z35 1606 aa18.79■□□□□ 0.6
H3F3B-212ENST00000592643 EFCAB2Q5VUJ9 269 aa18.79■□□□□ 0.6
H3F3B-212ENST00000592643 ARHGAP5Q13017 1502 aa18.78■□□□□ 0.6
H3F3B-212ENST00000592643 ARHGEF12Q9NZN5 1544 aa18.78■□□□□ 0.6
H3F3B-212ENST00000592643 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
H3F3B-212ENST00000592643 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
H3F3B-212ENST00000592643 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
H3F3B-212ENST00000592643 ADGRL1O94910 1474 aa18.77■□□□□ 0.59
H3F3B-212ENST00000592643 NCOA2Q15596 1464 aa18.76■□□□□ 0.59
H3F3B-212ENST00000592643 CFAP74Q9C0B2 1584 aa18.76■□□□□ 0.59
H3F3B-212ENST00000592643 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
H3F3B-212ENST00000592643 RICTORQ6R327 1708 aa18.74■□□□□ 0.59
H3F3B-212ENST00000592643 CCNB3Q8WWL7 1395 aa18.73■□□□□ 0.59
H3F3B-212ENST00000592643 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
H3F3B-212ENST00000592643 ABCC1P33527 1531 aa18.71■□□□□ 0.59
H3F3B-212ENST00000592643 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.59
H3F3B-212ENST00000592643 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
H3F3B-212ENST00000592643 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
H3F3B-212ENST00000592643 ZMYM4Q5VZL5 1548 aa18.69■□□□□ 0.58
H3F3B-212ENST00000592643 CFDP1Q9UEE9 299 aaPredicted RBP18.69■□□□□ 0.58
H3F3B-212ENST00000592643 YEATS2Q9ULM3 1422 aa18.68■□□□□ 0.58
H3F3B-212ENST00000592643 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
H3F3B-212ENST00000592643 KDM4FA0A1W2PPD8 638 aa18.66■□□□□ 0.58
H3F3B-212ENST00000592643 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
H3F3B-212ENST00000592643 KDM5CP41229 1560 aa18.66■□□□□ 0.58
H3F3B-212ENST00000592643 KIAA1107Q9UPP5 1409 aa18.65■□□□□ 0.58
H3F3B-212ENST00000592643 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
H3F3B-212ENST00000592643 SYCP2Q9BX26 1530 aa18.64■□□□□ 0.58
H3F3B-212ENST00000592643 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.57
H3F3B-212ENST00000592643 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.57
H3F3B-212ENST00000592643 ARHGEF40Q8TER5 1519 aa18.63■□□□□ 0.57
H3F3B-212ENST00000592643 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
H3F3B-212ENST00000592643 MAGI2Q86UL8 1455 aa18.62■□□□□ 0.57
H3F3B-212ENST00000592643 SIGLEC1Q9BZZ2 1709 aa18.61■□□□□ 0.57
H3F3B-212ENST00000592643 ZFYVE16Q7Z3T8 1539 aa18.6■□□□□ 0.57
H3F3B-212ENST00000592643 APLP2Q06481 763 aa18.6■□□□□ 0.57
H3F3B-212ENST00000592643 MLH3Q9UHC1 1453 aa18.59■□□□□ 0.57
H3F3B-212ENST00000592643 MYOM3Q5VTT5 1437 aa18.59■□□□□ 0.57
H3F3B-212ENST00000592643 CAMSAP2Q08AD1 1489 aa18.58■□□□□ 0.57
H3F3B-212ENST00000592643 PLEKHH2Q8IVE3 1493 aa18.58■□□□□ 0.56
H3F3B-212ENST00000592643 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
H3F3B-212ENST00000592643 HECW2Q9P2P5 1572 aa18.55■□□□□ 0.56
H3F3B-212ENST00000592643 DIP2CQ9Y2E4 1556 aa18.54■□□□□ 0.56
H3F3B-212ENST00000592643 ATP10AO60312 1499 aa18.53■□□□□ 0.56
H3F3B-212ENST00000592643 ABCA6Q8N139 1617 aa18.53■□□□□ 0.56
H3F3B-212ENST00000592643 KIDINS220Q9ULH0 1771 aa18.53■□□□□ 0.56
H3F3B-212ENST00000592643 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
H3F3B-212ENST00000592643 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
H3F3B-212ENST00000592643 INO80Q9ULG1 1556 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-212ENST00000592643 SPAG9O60271 1321 aaKnown RBP18.5■□□□□ 0.55
H3F3B-212ENST00000592643 C9orf84Q5VXU9 1444 aa18.49■□□□□ 0.55
H3F3B-212ENST00000592643 ARHGEF5Q12774 1597 aa18.48■□□□□ 0.55
H3F3B-212ENST00000592643 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
H3F3B-212ENST00000592643 CCDC141Q6ZP82 1450 aa18.48■□□□□ 0.55
H3F3B-212ENST00000592643 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
H3F3B-212ENST00000592643 REREQ9P2R6 1566 aa18.47■□□□□ 0.55
H3F3B-212ENST00000592643 FOXD1Q16676 465 aa18.47■□□□□ 0.55
H3F3B-212ENST00000592643 ADAMTSL3P82987 1691 aa18.46■□□□□ 0.55
H3F3B-212ENST00000592643 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
H3F3B-212ENST00000592643 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
H3F3B-212ENST00000592643 BCORL1Q5H9F3 1711 aa18.45■□□□□ 0.54
H3F3B-212ENST00000592643 ABCC5O15440 1437 aa18.44■□□□□ 0.54
H3F3B-212ENST00000592643 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
H3F3B-212ENST00000592643 RSPH4AQ5TD94 716 aa18.43■□□□□ 0.54
H3F3B-212ENST00000592643 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
H3F3B-212ENST00000592643 AGLP35573 1532 aa18.42■□□□□ 0.54
H3F3B-212ENST00000592643 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
H3F3B-212ENST00000592643 A2MP01023 1474 aa18.39■□□□□ 0.54
H3F3B-212ENST00000592643 MADDQ8WXG6 1647 aa18.39■□□□□ 0.53
H3F3B-212ENST00000592643 MLECQ14165 292 aa18.39■□□□□ 0.53
H3F3B-212ENST00000592643 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
H3F3B-212ENST00000592643 DAPK1P53355 1430 aa18.38■□□□□ 0.53
H3F3B-212ENST00000592643 PTPRMP28827 1452 aa18.36■□□□□ 0.53
H3F3B-212ENST00000592643 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
H3F3B-212ENST00000592643 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
H3F3B-212ENST00000592643 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
H3F3B-212ENST00000592643 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
H3F3B-212ENST00000592643 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
H3F3B-212ENST00000592643 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
H3F3B-212ENST00000592643 SHANK2Q9UPX8 1470 aa18.34■□□□□ 0.53
H3F3B-212ENST00000592643 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
H3F3B-212ENST00000592643 CROCC2H7BZ55 1655 aa18.31■□□□□ 0.52
H3F3B-212ENST00000592643 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
H3F3B-212ENST00000592643 RIMS1Q86UR5 1692 aaKnown RBP18.29■□□□□ 0.52
H3F3B-212ENST00000592643 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
H3F3B-212ENST00000592643 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
H3F3B-212ENST00000592643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.28■□□□□ 0.527e-39■□□□□ 9.5
H3F3B-212ENST00000592643 KIF15Q9NS87 1388 aa18.27■□□□□ 0.51
H3F3B-212ENST00000592643 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
H3F3B-212ENST00000592643 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
H3F3B-212ENST00000592643 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
H3F3B-212ENST00000592643 FER1L4A9Z1Z3 1794 aa18.25■□□□□ 0.51
H3F3B-212ENST00000592643 KIF3BO15066 747 aa18.25■□□□□ 0.51
H3F3B-212ENST00000592643 GGT6Q6P531 493 aa18.24■□□□□ 0.51
H3F3B-212ENST00000592643 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
H3F3B-212ENST00000592643 MROH1Q8NDA8 1641 aa18.22■□□□□ 0.51
H3F3B-212ENST00000592643 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms