RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
SMARCA4-217ENST00000591595 HFM1A2PYH4 1435 aa16.37■□□□□ 0.21
SMARCA4-217ENST00000591595 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
SMARCA4-217ENST00000591595 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.211e-7■■■■□ 26.1
SMARCA4-217ENST00000591595 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-217ENST00000591595 NESP48681 1621 aa16.35■□□□□ 0.21
SMARCA4-217ENST00000591595 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
SMARCA4-217ENST00000591595 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMARCA4-217ENST00000591595 NCOA2Q15596 1464 aa16.34■□□□□ 0.21
SMARCA4-217ENST00000591595 NAIPQ13075 1403 aa16.34■□□□□ 0.21
SMARCA4-217ENST00000591595 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
SMARCA4-217ENST00000591595 HSP90AA1P07900 732 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-217ENST00000591595 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.2
SMARCA4-217ENST00000591595 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-217ENST00000591595 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
SMARCA4-217ENST00000591595 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-217ENST00000591595 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
SMARCA4-217ENST00000591595 FOXD1Q16676 465 aa16.31■□□□□ 0.2
SMARCA4-217ENST00000591595 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
SMARCA4-217ENST00000591595 PTPN23Q9H3S7 1636 aa16.29■□□□□ 0.2
SMARCA4-217ENST00000591595 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-217ENST00000591595 CUL7Q14999 1698 aa16.27■□□□□ 0.19
SMARCA4-217ENST00000591595 L3MBTL2Q969R5 705 aa16.26■□□□□ 0.19
SMARCA4-217ENST00000591595 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
SMARCA4-217ENST00000591595 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-217ENST00000591595 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
SMARCA4-217ENST00000591595 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
SMARCA4-217ENST00000591595 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
SMARCA4-217ENST00000591595 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
SMARCA4-217ENST00000591595 CCDC184Q52MB2 194 aa16.23■□□□□ 0.19
SMARCA4-217ENST00000591595 PRDM4Q9UKN5 801 aa16.23■□□□□ 0.19
SMARCA4-217ENST00000591595 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
SMARCA4-217ENST00000591595 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
SMARCA4-217ENST00000591595 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
SMARCA4-217ENST00000591595 RRAGDQ9NQL2 400 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-217ENST00000591595 SUPT6HQ7KZ85 1726 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-217ENST00000591595 RGS3P49796 1198 aa16.19■□□□□ 0.18
SMARCA4-217ENST00000591595 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-217ENST00000591595 ZNF326Q5BKZ1 582 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-217ENST00000591595 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-217ENST00000591595 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-217ENST00000591595 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-217ENST00000591595 NAP1L2Q9ULW6 460 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-217ENST00000591595 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-217ENST00000591595 PAXIP1Q6ZW49 1069 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-217ENST00000591595 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-217ENST00000591595 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-217ENST00000591595 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
SMARCA4-217ENST00000591595 UGGT2Q9NYU1 1516 aa16.14■□□□□ 0.17
SMARCA4-217ENST00000591595 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
SMARCA4-217ENST00000591595 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-217ENST00000591595 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
SMARCA4-217ENST00000591595 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
SMARCA4-217ENST00000591595 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
SMARCA4-217ENST00000591595 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-217ENST00000591595 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
SMARCA4-217ENST00000591595 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
SMARCA4-217ENST00000591595 MAGI3Q5TCQ9 1506 aa16.11■□□□□ 0.17
SMARCA4-217ENST00000591595 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
SMARCA4-217ENST00000591595 ZNF777Q9ULD5 760 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-217ENST00000591595 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-217ENST00000591595 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-217ENST00000591595 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-217ENST00000591595 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
SMARCA4-217ENST00000591595 EPRSP07814 1512 aaKnown RBP16.08■□□□□ 0.17
SMARCA4-217ENST00000591595 KIF7Q2M1P5 1343 aa16.08■□□□□ 0.17
SMARCA4-217ENST00000591595 CENPJQ9HC77 1338 aaPredicted RBP16.08■□□□□ 0.17
SMARCA4-217ENST00000591595 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-217ENST00000591595 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
SMARCA4-217ENST00000591595 ZBED9Q6R2W3 1325 aa16.07■□□□□ 0.16
SMARCA4-217ENST00000591595 ARXQ96QS3 562 aa16.07■□□□□ 0.16
SMARCA4-217ENST00000591595 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-217ENST00000591595 MIA2Q96PC5 1412 aa16.06■□□□□ 0.16
SMARCA4-217ENST00000591595 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
SMARCA4-217ENST00000591595 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
SMARCA4-217ENST00000591595 KDM6BO15054 1643 aa16.05■□□□□ 0.16
SMARCA4-217ENST00000591595 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-217ENST00000591595 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
SMARCA4-217ENST00000591595 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
SMARCA4-217ENST00000591595 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
SMARCA4-217ENST00000591595 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
SMARCA4-217ENST00000591595 ANKRD30BQ9BXX2 1392 aa16.03■□□□□ 0.16
SMARCA4-217ENST00000591595 AKNAQ7Z591 1439 aa16.03■□□□□ 0.16
SMARCA4-217ENST00000591595 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-217ENST00000591595 ARHGEF11O15085 1522 aa16.02■□□□□ 0.16
SMARCA4-217ENST00000591595 CFDP1Q9UEE9 299 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-217ENST00000591595 IPO4Q8TEX9 1081 aaKnown RBP16■□□□□ 0.15
SMARCA4-217ENST00000591595 DAPK1P53355 1430 aa16■□□□□ 0.15
SMARCA4-217ENST00000591595 CLCN1P35523 988 aa16■□□□□ 0.15
SMARCA4-217ENST00000591595 STAC3Q96MF2 364 aa16■□□□□ 0.15
SMARCA4-217ENST00000591595 RPRD2Q5VT52 1461 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-217ENST00000591595 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
SMARCA4-217ENST00000591595 GCC2Q8IWJ2 1684 aa15.98■□□□□ 0.15
SMARCA4-217ENST00000591595 TMC1Q8TDI8 760 aa15.98■□□□□ 0.15
SMARCA4-217ENST00000591595 PKD2Q13563 968 aa15.97■□□□□ 0.15
SMARCA4-217ENST00000591595 ABCC5O15440 1437 aa15.97■□□□□ 0.15
SMARCA4-217ENST00000591595 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-217ENST00000591595 ROCK1Q13464 1354 aa15.96■□□□□ 0.14
SMARCA4-217ENST00000591595 KDM2AQ9Y2K7 1162 aa15.95■□□□□ 0.14
SMARCA4-217ENST00000591595 FBLN2P98095 1184 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms